Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia33512 Actinidia chinensis HOM05D000528 ORTHO05D000999 7.5e-89 330.5 167 100.0
Actinidia39603 Actinidia chinensis HOM05D000528 ORTHO05D000999 1.6e-54 216.5 175 71.4
vmacro06378 Vaccinium macrocarpon HOM05D000528 ORTHO05D000999 5.1e-37 158.3 186 54.3
Rhsim02G0256800 Rhododendron simsii HOM05D000528 ORTHO05D000999 1.4e-34 150.2 161 58.4
Dinv25491 Davidia involucrata HOM05D000528 ORTHO05D000999 1.8e-34 149.8 166 54.8
Rhsim05G0000800 Rhododendron simsii HOM05D000528 ORTHO05D000999 2.4e-34 149.4 161 57.8
CSS0007186 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D000999 1.9e-31 139.8 152 58.6
Dinv42440 Davidia involucrata HOM05D000528 ORTHO05D000999 4.2e-31 138.7 164 51.8
GSVIVG01014993001 Vitis vinifera HOM05D000528 ORTHO05D000999 7.2e-31 137.9 162 53.7
TWI34G0978 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 6.1e-30 134.8 167 50.9
Duzib150G1295 Durio zibethinus HOM05D000528 ORTHO05D000999 2.3e-29 132.9 171 49.1
TWI63G0826 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 3.0e-29 132.5 166 48.8
Thecc.09G067600 Theobroma cacao HOM05D000528 ORTHO05D000999 6.7e-29 131.3 171 50.3
EL10Ac9g21127 Beta vulgaris HOM05D000528 ORTHO05D000999 1.1e-28 130.6 170 48.8
PSO017G2681 Papaver somniferum HOM05D000528 ORTHO05D000999 1.1e-28 130.6 160 50.6
COL.COLO4_21179 Corchorus olitorius HOM05D000528 ORTHO05D000999 1.5e-28 130.2 161 49.1
PSO170G1988 Papaver somniferum HOM05D000528 ORTHO05D000999 1.5e-28 130.2 162 50.0
SGA_v2.0_scaffold13G06349 Striga asiatica HOM05D000528 ORTHO05D000999 3.3e-28 129.0 160 48.8
Gorai.009G039300 Gossypium raimondii HOM05D000528 ORTHO05D000999 4.4e-28 128.6 169 46.2
TAR626G1794 Trochodendron aralioides HOM05D000528 ORTHO05D000999 4.4e-28 128.6 171 47.4
Manes.03G054900 Manihot esculenta HOM05D000528 ORTHO05D000999 5.7e-28 128.3 168 49.4
Gohir.A05G037300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 9.7e-28 127.5 170 46.5
HanXRQChr16g0521011 Helianthus annuus HOM05D000528 ORTHO05D000999 1.3e-27 127.1 158 51.3
Gohir.D05G038800 Gossypium hirsutum HOM05D000528 ORTHO05D000999 2.2e-27 126.3 169 45.6
CANSAT56G4237 Cannabis sativa HOM05D000528 ORTHO05D000999 2.8e-27 125.9 160 48.8
Cc09_g04400 Coffea canephora HOM05D000528 ORTHO05D000999 2.8e-27 125.9 168 48.8
Sabra06G0167300 Salix brachista HOM05D000528 ORTHO05D000999 2.8e-27 125.9 168 50.6
Ciclev10007246m.g Citrus clementina HOM05D000528 ORTHO05D000999 3.7e-27 125.6 168 50.0
Atru.chr7.1801 Acer truncatum HOM05D000528 ORTHO05D000999 6.3e-27 124.8 172 48.3
Aqoxy6G02695 Aquilegia oxysepala HOM05D000528 ORTHO05D000999 6.3e-27 124.8 163 48.5
AUR62038332 Chenopodium quinoa HOM05D000528 ORTHO05D000999 6.3e-27 124.8 169 46.7
Nn6g31501 Nelumbo nucifera HOM05D000528 ORTHO05D000999 6.3e-27 124.8 168 49.4
Potri.006G216900 Populus trichocarpa HOM05D000528 ORTHO05D000999 6.3e-27 124.8 168 50.0
ECA234G2762 Erigeron canadensis HOM05D000528 ORTHO05D000999 8.2e-27 124.4 158 50.6
Prupe.7G189500 Prunus persica HOM05D000528 ORTHO05D000999 1.1e-26 124.0 161 50.9
Eucgr.C00756 Eucalyptus grandis HOM05D000528 ORTHO05D000999 1.8e-26 123.2 159 48.4
Lsat_1_v5_gn_4_40140 Lactuca sativa HOM05D000528 ORTHO05D000999 5.3e-26 121.7 160 52.5
Lj1A1154G40 Lonicera japonica HOM05D000528 ORTHO05D000999 5.3e-26 121.7 164 50.6
Solyc12g017830.3 Solanum lycopersicum HOM05D000528 ORTHO05D000999 5.3e-26 121.7 172 45.3
Sopen12g008630 Solanum pennellii HOM05D000528 ORTHO05D000999 6.9e-26 121.3 172 45.3
Cfa021584 Carpinus fangiana HOM05D000528 ORTHO05D000999 1.5e-25 120.2 159 50.9
DCAR_027484 Daucus carota HOM05D000528 ORTHO05D000999 2.0e-25 119.8 159 44.7
Migut.F01825 Erythranthe guttata HOM05D000528 ORTHO05D000999 2.0e-25 119.8 161 47.2
Gohir.D07G018100 Gossypium hirsutum HOM05D000528 ORTHO05D000999 2.0e-25 119.8 161 46.6
SalBow3G2418 Salvia bowleyana HOM05D000528 ORTHO05D000999 2.6e-25 119.4 160 48.1
Lalb_Chr12g0200411 Lupinus albus HOM05D000528 ORTHO05D000999 3.4e-25 119.0 165 48.5
Gohir.A07G018300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 4.5e-25 118.6 161 46.6
Gorai.001G018700 Gossypium raimondii HOM05D000528 ORTHO05D000999 5.9e-25 118.2 161 46.0
Lj4g0008783 Lotus japonicus HOM05D000528 ORTHO05D000999 7.7e-25 117.9 168 47.0
MBI13_g05971_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D000999 1.0e-24 117.5 170 47.6
DCAR_023798 Daucus carota HOM05D000528 ORTHO05D000999 1.3e-24 117.1 158 44.3
Sc03g0004600 Simmondsia chinensis HOM05D000528 ORTHO05D000999 1.3e-24 117.1 161 49.7
HPP92_012349 Vanilla planifolia HOM05D000528 ORTHO05D000999 1.7e-24 116.7 166 45.2
CsaV3_3G010020 Cucumis sativus L. HOM05D000528 ORTHO05D000999 2.2e-24 116.3 172 45.9
MD02G1105600 Malus domestica HOM05D000528 ORTHO05D000999 2.2e-24 116.3 162 48.8
arahy.Tifrunner.gnm1.ann1.JF9XSQ Arachis hypogaea HOM05D000528 ORTHO05D000999 2.9e-24 115.9 162 51.2
arahy.Tifrunner.gnm1.ann1.Z2MV1Y Arachis hypogaea HOM05D000528 ORTHO05D000999 2.9e-24 115.9 162 51.2
MSTRG.27425 Avicennia marina HOM05D000528 ORTHO05D000999 2.9e-24 115.9 157 48.4
SalBow1G1474 Salvia bowleyana HOM05D000528 ORTHO05D000999 2.9e-24 115.9 158 45.6
Manes.16G088500 Manihot esculenta HOM05D000528 ORTHO05D000999 3.8e-24 115.5 170 42.9
Os07g0564700 Oryza sativa ssp. japonica HOM05D000528 ORTHO05D000999 3.8e-24 115.5 162 45.1
TPR.G12643 Trifolium pratense HOM05D000528 ORTHO05D000999 3.8e-24 115.5 174 48.3
FvH4_1g09670 Fragaria vesca HOM05D000528 ORTHO05D000999 1.1e-23 114.0 162 46.3
FAN19G1221 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.1e-23 114.0 162 46.3
FAN26G1955 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.1e-23 114.0 162 46.3
FAN26G3208 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.1e-23 114.0 162 46.3
MD15G1225500 Malus domestica HOM05D000528 ORTHO05D000999 1.1e-23 114.0 157 50.3
FAN28G2848 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.4e-23 113.6 162 46.3
SGA_v2.0_scaffold122G33228 Striga asiatica HOM05D000528 ORTHO05D000999 1.4e-23 113.6 169 44.4
Phvul.003G126000 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 1.9e-23 113.2 173 45.1
RcHm_v2.0_Chr2g0096511 Rosa chinensis HOM05D000528 ORTHO05D000999 1.9e-23 113.2 162 48.1
BcaB02g10779 Brassica carinata HOM05D000528 ORTHO05D000999 3.2e-23 112.5 162 43.2
CiPaw.08G000100 Carya illinoinensis HOM05D000528 ORTHO05D000999 3.2e-23 112.5 161 50.3
Ca_21350_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 3.2e-23 112.5 162 46.9
ClCG05G002580 Citrullus lanatus HOM05D000528 ORTHO05D000999 3.2e-23 112.5 172 45.9
VMungo1215G1674 Vigna mungo HOM05D000528 ORTHO05D000999 4.2e-23 112.1 170 44.7
Glyma.13G115800 Glycine max HOM05D000528 ORTHO05D000999 5.5e-23 111.7 171 46.8
Zm00001eb107040 Zea mays HOM05D000528 ORTHO05D000999 7.2e-23 111.3 160 46.9
Sed0018294 Sechium edule HOM05D000528 ORTHO05D000999 9.4e-23 110.9 170 44.1
Carub.0005s0916 Capsella rubella HOM05D000528 ORTHO05D000999 1.2e-22 110.5 162 43.2
MSTRG.8180 Avicennia marina HOM05D000528 ORTHO05D000999 1.6e-22 110.2 159 45.9
AL5G21370 Arabidopsis lyrata HOM05D000528 ORTHO05D000999 2.1e-22 109.8 162 44.4
ECA248G1999 Erigeron canadensis HOM05D000528 ORTHO05D000999 2.1e-22 109.8 155 46.5
Thhalv10002369m.g Eutrema salsugineum HOM05D000528 ORTHO05D000999 4.7e-22 108.6 163 44.8
AT3G43300 Arabidopsis thaliana HOM05D000528 ORTHO05D000999 6.1e-22 108.2 162 43.8
Glyma.17G044000 Glycine max HOM05D000528 ORTHO05D000999 6.1e-22 108.2 167 47.9
ATR0006G069 Amborella trichopoda HOM05D000528 ORTHO05D000999 1.0e-21 107.5 169 43.2
PGR142G1496 Punica granatum HOM05D000528 ORTHO05D000999 1.0e-21 107.5 157 45.9
Sp5g17840 Schrenkiella parvula HOM05D000528 ORTHO05D000999 1.0e-21 107.5 165 43.6
CDE06G2617 Ceratophyllum demersum HOM05D000528 ORTHO05D000999 1.4e-21 107.1 165 43.6
HanXRQChr01g0017721 Helianthus annuus HOM05D000528 ORTHO05D000999 3.9e-21 105.5 158 47.5
BcaC01g02206 Brassica carinata HOM05D000528 ORTHO05D000999 5.2e-21 105.1 162 42.0
Medtr4g124430 Medicago truncatula HOM05D000528 ORTHO05D000999 6.7e-21 104.8 172 45.3
Sed0012879 Sechium edule HOM05D000528 ORTHO05D000999 6.7e-21 104.8 168 44.0
CARHR153370 Cardamine hirsuta HOM05D000528 ORTHO05D000999 1.1e-20 104.0 162 42.0
FAN23G1603 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.1e-20 104.0 154 46.1
Lalb_Chr07g0181491 Lupinus albus HOM05D000528 ORTHO05D000999 1.1e-20 104.0 170 44.7
Hma1.2p1_0179F.1_g079080 Hydrangea macrophylla HOM05D000528 ORTHO05D000999 2.0e-20 103.2 99 57.6
AUR62023914 Chenopodium quinoa HOM05D000528 ORTHO05D000999 7.4e-20 101.3 186 38.2
THA.LOC104810976 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 7.4e-20 101.3 165 43.6
THA.LOC104799601 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 4.8e-19 98.6 161 41.6
Lsat_1_v5_gn_1_84121 Lactuca sativa HOM05D000528 ORTHO05D000999 6.3e-19 98.2 156 45.5
C03p67850 Brassica napus HOM05D000528 ORTHO05D000999 8.2e-19 97.8 170 40.0
BolSC21t60253H Brassica oleracea HOM05D000528 ORTHO05D000999 8.2e-19 97.8 170 40.0
Nitab4.5_0000219g0110 Nicotiana tabacum HOM05D000528 ORTHO05D000999 1.2e-17 94.0 155 43.9
Nitab4.5_0006028g0020 Nicotiana tabacum HOM05D000528 ORTHO05D000999 1.2e-17 94.0 155 43.9
Psat4g020000 Pisum sativum HOM05D000528 ORTHO05D000999 1.2e-17 94.0 178 41.0
unitig_699.g19739 Utricularia gibba HOM05D000528 ORTHO05D000999 2.0e-17 93.2 158 41.8
A06p26630 Brassica napus HOM05D000528 ORTHO05D000999 2.6e-17 92.8 169 39.1
BraA06t25597Z Brassica rapa HOM05D000528 ORTHO05D000999 7.7e-17 91.3 173 38.2
unitig_736.g22501 Utricularia gibba HOM05D000528 ORTHO05D000999 1.3e-16 90.5 160 41.2
Peaxi162Scf00006g03411 Petunia axillaris HOM05D000528 ORTHO05D000999 6.5e-16 88.2 150 43.3
Pp3c18_8720 Physcomitrium patens HOM05D000528 ORTHO05D000999 8.5e-16 87.8 163 38.0
Pp3c18_8730 Physcomitrium patens HOM05D000528 ORTHO05D000999 8.5e-16 87.8 163 38.0
Hund00753 Selenicereus undatus HOM05D000528 ORTHO05D000999 8.5e-16 87.8 140 40.0
Aa31LG4G12930 Aethionema arabicum HOM05D000528 ORTHO05D000999 1.9e-15 86.7 140 43.6
CAN.G8.14 Capsicum annuum HOM05D000528 ORTHO05D000999 5.5e-15 85.1 102 50.0
Pp3c21_12020 Physcomitrium patens HOM05D000528 ORTHO05D000999 7.2e-15 84.7 170 37.6
Oeu007685.1 Olea europaea HOM05D000528 ORTHO05D000999 2.7e-14 82.8 87 54.0
Mapoly0003s0171 Marchantia polymorpha HOM05D000528 ORTHO05D000999 5.2e-13 78.6 154 33.8
CDE07G1894 Ceratophyllum demersum HOM05D000528 ORTHO05D000999 1.2e-12 77.4 92 50.0
Pp3c18_8290 Physcomitrium patens HOM05D000528 ORTHO05D000999 1.2e-12 77.4 163 36.8
Migut.F02072 Erythranthe guttata HOM05D000528 ORTHO05D000999 2.0e-12 76.6 83 55.4
AagrBONN_evm.TU.Sc2ySwM_117.2707 Anthoceros agrestis HOM05D000528 ORTHO05D000999 3.3e-12 75.9 169 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2712 Anthoceros agrestis HOM05D000528 ORTHO05D000999 3.3e-12 75.9 169 32.5
Pp3c8_19790 Physcomitrium patens HOM05D000528 ORTHO05D000999 4.1e-10 68.9 156 32.1
CBR_g5727 Chara braunii HOM05D000528 ORTHO05D000999 1.6e-09 67.0 155 29.7
MELO3C006224.2 Cucumis melo HOM05D000528 ORTHO05D000999 1.7e-08 63.5 41 75.6
Oeu062027.1 Olea europaea HOM05D000113 ORTHO05D010194 7.2e-07 58.2 32 81.2
SalBow1G0700 Salvia bowleyana HOM05D000528 ORTHO05D000999 3.6e-06 55.8 68 47.1


User provided reference genes

Program Settings