Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia13618 Actinidia chinensis HOM05D004227 ORTHO05D005027 1.6e-82 309.3 150 100.0
Actinidia31661 Actinidia chinensis HOM05D004227 ORTHO05D005027 1.6e-82 309.3 150 100.0
CSS0010737 Camellia sinensis var. sinensis HOM05D004227 ORTHO05D005027 2.0e-80 302.4 150 96.0
Rhsim03G0159900 Rhododendron simsii HOM05D004227 ORTHO05D005027 5.7e-80 300.8 152 96.7
MSTRG.27225 Avicennia marina HOM05D004227 ORTHO05D005027 1.7e-79 299.3 148 96.6
Migut.F00534 Erythranthe guttata HOM05D004227 ORTHO05D005027 2.9e-79 298.5 148 95.9
Nitab4.5_0003321g0070 Nicotiana tabacum HOM05D004227 ORTHO05D005027 2.9e-79 298.5 148 95.9
SGA_v2.0_scaffold44G16581 Striga asiatica HOM05D004227 ORTHO05D005027 3.7e-79 298.1 148 96.6
Gohir.D11G079800 Gossypium hirsutum HOM05D004227 ORTHO05D005027 4.9e-79 297.7 149 94.6
Nitab4.5_0002359g0040 Nicotiana tabacum HOM05D004227 ORTHO05D005027 4.9e-79 297.7 148 95.9
Gohir.A11G075100 Gossypium hirsutum HOM05D004227 ORTHO05D005027 6.4e-79 297.4 149 94.6
Gorai.007G085400 Gossypium raimondii HOM05D004227 ORTHO05D005027 6.4e-79 297.4 149 94.6
TWI23G1276 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 1.1e-78 296.6 149 94.0
Thecc.01G396100 Theobroma cacao HOM05D004227 ORTHO05D005027 1.4e-78 296.2 149 94.0
Duzib133G0083 Durio zibethinus HOM05D004227 ORTHO05D005027 1.8e-78 295.8 149 94.0
Duzib138G0704 Durio zibethinus HOM05D004227 ORTHO05D005027 1.8e-78 295.8 149 94.0
Potri.014G049700 Populus trichocarpa HOM05D004227 ORTHO05D005027 1.8e-78 295.8 150 92.7
TWI59G0764 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 1.8e-78 295.8 149 94.0
Cpa.g.sc22.26 Carica papaya HOM05D004227 ORTHO05D005027 3.2e-78 295.0 149 94.0
Hma1.2p1_1508F.1_g287710 Hydrangea macrophylla HOM05D004227 ORTHO05D005027 3.2e-78 295.0 148 94.6
Nn1g00815 Nelumbo nucifera HOM05D004227 ORTHO05D005027 3.2e-78 295.0 148 94.6
Sed0011885 Sechium edule HOM05D004227 ORTHO05D005027 4.1e-78 294.7 147 95.2
arahy.Tifrunner.gnm1.ann1.CPA9TZ Arachis hypogaea HOM05D004227 ORTHO05D005027 5.4e-78 294.3 149 93.3
arahy.Tifrunner.gnm1.ann1.RC63K2 Arachis hypogaea HOM05D004227 ORTHO05D005027 5.4e-78 294.3 149 93.3
CsaV3_3G007250 Cucumis sativus L. HOM05D004227 ORTHO05D005027 5.4e-78 294.3 147 94.6
Gohir.A08G057900 Gossypium hirsutum HOM05D004227 ORTHO05D005027 5.4e-78 294.3 149 93.3
Gohir.D08G067200 Gossypium hirsutum HOM05D004227 ORTHO05D005027 5.4e-78 294.3 149 93.3
Gorai.004G069800 Gossypium raimondii HOM05D004227 ORTHO05D005027 5.4e-78 294.3 149 93.3
unitig_46.g18760 Utricularia gibba HOM05D004227 ORTHO05D005027 5.4e-78 294.3 148 94.6
Ciclev10022690m.g Citrus clementina HOM05D004227 ORTHO05D005027 7.0e-78 293.9 148 93.9
Dinv43609 Davidia involucrata HOM05D004227 ORTHO05D005027 7.0e-78 293.9 148 93.9
Nitab4.5_0002153g0060 Nicotiana tabacum HOM05D004227 ORTHO05D005027 9.2e-78 293.5 147 95.2
Glyma.03G109200 Glycine max HOM05D004227 ORTHO05D005027 1.2e-77 293.1 149 93.3
Ah.01g017970 Amaranthus hybridus HOM05D004227 ORTHO05D005027 1.6e-77 292.7 149 93.3
Glyma.07G115700 Glycine max HOM05D004227 ORTHO05D005027 1.6e-77 292.7 149 92.6
TAR636G2330 Trochodendron aralioides HOM05D004227 ORTHO05D005027 1.6e-77 292.7 148 93.2
Medtr3g118110 Medicago truncatula HOM05D004227 ORTHO05D005027 2.7e-77 292.0 149 92.6
Hund24961 Selenicereus undatus HOM05D004227 ORTHO05D005027 2.7e-77 292.0 149 94.0
TPR.G38529 Trifolium pratense HOM05D004227 ORTHO05D005027 2.7e-77 292.0 149 92.6
AagrBONN_evm.TU.Sc2ySwM_344.2698 Anthoceros agrestis HOM05D004227 ORTHO05D005027 3.5e-77 291.6 148 94.6
CDE06G1820 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 148 92.6
CDE06G1835 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 148 92.6
Lsat_1_v5_gn_0_10121 Lactuca sativa HOM05D004227 ORTHO05D005027 3.5e-77 291.6 154 91.6
Lj3g0003497 Lotus japonicus HOM05D004227 ORTHO05D005027 3.5e-77 291.6 149 92.6
Lj3g0012613 Lotus japonicus HOM05D004227 ORTHO05D005027 3.5e-77 291.6 149 92.6
PSO063G7112 Papaver somniferum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 148 93.2
PSO782G5116 Papaver somniferum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 148 93.2
Phvul.010G046900 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 3.5e-77 291.6 149 92.6
SEGI_27062 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 3.5e-77 291.6 150 92.7
HanXRQChr09g0252831 Helianthus annuus HOM05D004227 ORTHO05D005027 4.6e-77 291.2 155 91.0
Psat5g001800 Pisum sativum HOM05D004227 ORTHO05D005027 4.6e-77 291.2 149 92.6
Dinv44054 Davidia involucrata HOM05D004227 ORTHO05D005027 5.9e-77 290.8 148 92.6
ECA232G0872 Erigeron canadensis HOM05D004227 ORTHO05D005027 5.9e-77 290.8 145 95.2
PGR004G2481 Punica granatum HOM05D004227 ORTHO05D005027 7.8e-77 290.4 149 91.9
Solyc03g093680.4 Solanum lycopersicum HOM05D004227 ORTHO05D005027 7.8e-77 290.4 147 93.9
Sopen03g024580 Solanum pennellii HOM05D004227 ORTHO05D005027 7.8e-77 290.4 147 93.9
VMungo0331G1366 Vigna mungo HOM05D004227 ORTHO05D005027 7.8e-77 290.4 149 91.9
Ca_15636_v3 Cicer arietinum L. HOM05D004227 ORTHO05D005027 1.0e-76 290.0 149 91.9
COL.COLO4_12397 Corchorus olitorius HOM05D004227 ORTHO05D005027 1.0e-76 290.0 149 92.6
PGR004G2111 Punica granatum HOM05D004227 ORTHO05D005027 1.0e-76 290.0 149 92.6
SEGI_06195 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 1.0e-76 290.0 150 92.0
Potri.002G138500 Populus trichocarpa HOM05D004227 ORTHO05D005027 1.3e-76 289.7 149 91.3
HPP92_014889 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.3e-76 289.7 146 93.2
HPP92_014893 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.3e-76 289.7 146 93.2
EL10Ac6g14165 Beta vulgaris HOM05D004227 ORTHO05D005027 1.7e-76 289.3 149 92.6
CANSAT25G0195 Cannabis sativa HOM05D004227 ORTHO05D005027 2.3e-76 288.9 149 91.3
Glyma.15G097500 Glycine max HOM05D004227 ORTHO05D005027 3.0e-76 288.5 149 91.3
MD07G1109700 Malus domestica HOM05D004227 ORTHO05D005027 3.0e-76 288.5 149 91.3
Mapoly0032s0045 Marchantia polymorpha HOM05D004227 ORTHO05D005027 3.0e-76 288.5 150 91.3
Phvul.006G161800 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 3.9e-76 288.1 149 91.3
AUR62014174 Chenopodium quinoa HOM05D004227 ORTHO05D005027 5.0e-76 287.7 149 91.9
Eucgr.D01223 Eucalyptus grandis HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 90.6
FAN01G2506 Fragaria x ananassa HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 89.9
FAN03G2167 Fragaria x ananassa HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 89.9
FAN06G3355 Fragaria x ananassa HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 89.9
FAN10G0507 Fragaria x ananassa HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 89.9
FAN10G0749 Fragaria x ananassa HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 89.9
Lalb_Chr06g0171081 Lupinus albus HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 91.3
Prupe.2G133100 Prunus persica HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 90.6
RcHm_v2.0_Chr1g0348061 Rosa chinensis HOM05D004227 ORTHO05D005027 6.6e-76 287.3 149 89.9
Pp3c1_16440 Physcomitrium patens HOM05D004227 ORTHO05D005027 8.6e-76 287.0 148 91.2
Pp3c2_21720 Physcomitrium patens HOM05D004227 ORTHO05D005027 8.6e-76 287.0 148 91.2
CAN.G460.2 Capsicum annuum HOM05D004227 ORTHO05D005027 1.1e-75 286.6 147 93.2
HanXRQChr15g0493591 Helianthus annuus HOM05D004227 ORTHO05D005027 1.1e-75 286.6 144 94.4
Manes.05G055700 Manihot esculenta HOM05D004227 ORTHO05D005027 1.1e-75 286.6 150 90.7
COL.COLO4_14773 Corchorus olitorius HOM05D004227 ORTHO05D005027 1.5e-75 286.2 149 91.3
FAN06G2246 Fragaria x ananassa HOM05D004227 ORTHO05D005027 1.5e-75 286.2 149 89.3
Aqoxy3G01907 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 4.3e-75 284.6 148 91.9
THA.LOC104816996 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 7.3e-75 283.9 144 93.8
Aqoxy91s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 9.5e-75 283.5 148 91.9
THA.LOC104801496 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 9.5e-75 283.5 144 93.8
Os12g0287200 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 1.1e-73 280.0 144 91.0
Rhsim13G0168500 Rhododendron simsii HOM05D004227 ORTHO05D005027 1.1e-73 280.0 147 93.9
Zm00001eb174310 Zea mays HOM05D004227 ORTHO05D005027 1.8e-73 279.3 147 88.4
A10p00100 Brassica napus HOM05D004227 ORTHO05D005027 2.3e-73 278.9 150 90.0
BraA10t42288Z Brassica rapa HOM05D004227 ORTHO05D005027 2.3e-73 278.9 150 90.0
BcaC07g42337 Brassica carinata HOM05D004227 ORTHO05D005027 3.1e-73 278.5 148 89.9
BcaC07g42439 Brassica carinata HOM05D004227 ORTHO05D005027 8.9e-73 276.9 148 89.2
BolC8t52927H Brassica oleracea HOM05D004227 ORTHO05D005027 8.9e-73 276.9 148 89.2
BcaB03g13634 Brassica carinata HOM05D004227 ORTHO05D005027 2.6e-72 275.4 150 89.3
C05p00070 Brassica napus HOM05D004227 ORTHO05D005027 2.6e-72 275.4 150 89.3
Thhalv10009013m.g Eutrema salsugineum HOM05D004227 ORTHO05D005027 4.4e-72 274.6 148 87.2
AL1G10090 Arabidopsis lyrata HOM05D004227 ORTHO05D005027 5.8e-72 274.2 148 87.2
Carub.0001s0001 Capsella rubella HOM05D004227 ORTHO05D005027 1.3e-71 273.1 148 87.8
Os08g0107900 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 1.3e-71 273.1 144 88.9
QL04p029953 Quercus lobata HOM05D004227 ORTHO05D005027 1.7e-71 272.7 148 86.5
QL07p006029 Quercus lobata HOM05D004227 ORTHO05D005027 1.7e-71 272.7 148 86.5
AT1G02140 Arabidopsis thaliana HOM05D004227 ORTHO05D005027 3.7e-71 271.6 148 86.5
CARHR000190 Cardamine hirsuta HOM05D004227 ORTHO05D005027 3.7e-71 271.6 149 87.2
Cfa009863 Carpinus fangiana HOM05D004227 ORTHO05D005027 3.7e-71 271.6 148 86.5
BolC5t28794H Brassica oleracea HOM05D004227 ORTHO05D005027 4.1e-70 268.1 158 84.8
CiPaw.14G019900 Carya illinoinensis HOM05D004227 ORTHO05D005027 5.4e-70 267.7 144 86.1
Lalb_Chr01g0012541 Lupinus albus HOM05D004227 ORTHO05D005027 5.4e-70 267.7 140 90.0
Zm00001eb260270 Zea mays HOM05D004227 ORTHO05D005027 2.7e-69 265.4 143 88.1
vmacro05443 Vaccinium macrocarpon HOM05D004227 ORTHO05D005027 1.9e-67 259.2 136 92.6
MBI19_g27175_MAGBIO Magnolia biondii HOM05D004227 ORTHO05D005027 9.5e-67 256.9 128 93.8
ClCG05G000140 Citrullus lanatus HOM05D004227 ORTHO05D005027 1.6e-66 256.1 127 93.7
MELO3C005946.2 Cucumis melo HOM05D004227 ORTHO05D005027 1.6e-66 256.1 127 93.7
Nitab4.5_0004457g0020 Nicotiana tabacum HOM05D004227 ORTHO05D005027 2.1e-66 255.8 129 93.8
SalBow3G0312 Salvia bowleyana HOM05D004227 ORTHO05D005027 2.8e-66 255.4 129 93.0
PGSC0003DMG400021002 Solanum tuberosum HOM05D004227 ORTHO05D005027 2.8e-66 255.4 130 92.3
TAR629G1537 Trochodendron aralioides HOM05D004227 ORTHO05D005027 2.8e-66 255.4 128 92.2
SalBow3G4020 Salvia bowleyana HOM05D004227 ORTHO05D005027 3.6e-66 255.0 127 93.7
Oeu030870.1 Olea europaea HOM05D004227 ORTHO05D005027 8.1e-66 253.8 128 92.2
Sp1g00120 Schrenkiella parvula HOM05D004227 ORTHO05D005027 8.1e-66 253.8 135 88.1
unitig_37.g12485 Utricularia gibba HOM05D004227 ORTHO05D005027 1.8e-65 252.7 129 93.8
Atru.chr2.217 Acer truncatum HOM05D004227 ORTHO05D005027 5.2e-65 251.1 132 90.2
FvH4_7g10360 Fragaria vesca HOM05D004227 ORTHO05D005027 5.2e-65 251.1 143 81.8
Lj7A548G44 Lonicera japonica HOM05D004227 ORTHO05D005027 5.2e-65 251.1 124 94.4
AUR62039531 Chenopodium quinoa HOM05D004227 ORTHO05D005027 6.8e-65 250.8 140 85.0
Lj9A555T36 Lonicera japonica HOM05D004227 ORTHO05D005027 6.8e-65 250.8 128 90.6
Sabra02G0107500 Salix brachista HOM05D004227 ORTHO05D005027 6.8e-65 250.8 130 89.2
Sc24g0004090 Simmondsia chinensis HOM05D004227 ORTHO05D005027 6.8e-65 250.8 128 91.4
Peaxi162Scf01305g00032 Petunia axillaris HOM05D004227 ORTHO05D005027 8.9e-65 250.4 127 92.1
Peaxi162Scf00304g01023 Petunia axillaris HOM05D004227 ORTHO05D005027 2.6e-64 248.8 148 83.8
Oeu046442.1 Olea europaea HOM05D004227 ORTHO05D005027 3.4e-64 248.4 128 89.8
Aa31LG1G11540 Aethionema arabicum HOM05D004227 ORTHO05D005027 5.8e-64 247.7 128 89.8
Aqoxy109s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 9.9e-64 246.9 143 83.2
Aqoxy3G01910 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 1.3e-63 246.5 128 90.6
SGA_v2.0_scaffold60G20835 Striga asiatica HOM05D004227 ORTHO05D005027 1.3e-63 246.5 140 85.7
A09p69360 Brassica napus HOM05D004227 ORTHO05D005027 1.7e-63 246.1 150 79.3
BraA09t42281Z Brassica rapa HOM05D004227 ORTHO05D005027 1.7e-63 246.1 150 79.3
Cre09.g392692 Chlamydomonas reinhardtii HOM05D004227 ORTHO05D005027 1.7e-60 236.1 143 74.1
MCO04G284 Micromonas commoda HOM05D004227 ORTHO05D005027 2.3e-60 235.7 144 74.3
Medtr3g109260 Medicago truncatula HOM05D004227 ORTHO05D005027 5.6e-59 231.1 148 73.6
ATR0090G010 Amborella trichopoda HOM05D004227 ORTHO05D005027 2.1e-58 229.2 154 75.3
Pp3c1_16390 Physcomitrium patens HOM05D004227 ORTHO05D005027 1.3e-52 209.9 145 73.1
Haze_23235 Corylus avellana HOM05D004227 ORTHO05D005027 6.6e-52 207.6 184 58.7
CiPaw.13G025400 Carya illinoinensis HOM05D004227 ORTHO05D005027 4.3e-51 204.9 116 82.8
SHI13620 Sapria himalayana HOM05D004227 ORTHO05D005027 4.7e-50 201.4 124 75.8
GSVIVG01013876001 Vitis vinifera HOM05D004227 ORTHO05D005027 4.0e-49 198.4 103 92.2
Lsat_1_v5_gn_2_127120 Lactuca sativa HOM05D004227 ORTHO05D005027 6.9e-49 197.6 103 91.3
Cc02_g04830 Coffea canephora HOM05D004227 ORTHO05D005027 7.6e-48 194.1 103 89.3
Haze_27249 Corylus avellana HOM05D004227 ORTHO05D005027 9.3e-46 187.2 114 74.6
CDE06G1723 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 2.8e-42 175.6 87 90.8
C08p54180 Brassica napus HOM05D004227 ORTHO05D005027 1.5e-40 169.9 115 76.5
Atru.chr5.117 Acer truncatum HOM05D004227 ORTHO05D005027 1.2e-37 160.2 79 89.9
CBR_g19771 Chara braunii HOM05D004227 ORTHO05D005027 3.5e-37 158.7 81 93.8
VMungo0540G1169 Vigna mungo HOM05D004227 ORTHO05D005027 7.9e-37 157.5 84 83.3
HPP92_020677 Vanilla planifolia HOM05D004227 ORTHO05D005027 7.4e-35 151.0 139 60.4
Rhsim13G0168700 Rhododendron simsii HOM05D004227 ORTHO05D005027 2.4e-33 146.0 73 97.3
MD00G1129300 Malus domestica HOM05D004227 ORTHO05D005027 7.1e-30 134.4 71 83.1
Aqoxy3G01908 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 8.7e-28 127.5 71 84.5
Aqoxy91s002 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 3.3e-27 125.6 71 84.5
Actinidia01038 Actinidia chinensis HOM05D004227 ORTHO05D005027 7.4e-27 124.4 79 75.9
Aqoxy3G01911 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 1.6e-26 123.2 71 83.1
Sed0011381 Sechium edule HOM05D004227 ORTHO05D373379 3.4e-16 89.0 45 95.6
Aqoxy109s002 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 2.9e-15 85.9 46 89.1
Haze_23858 Corylus avellana HOM05D004227 ORTHO05D034883 3.0e-12 75.9 74 54.1


User provided reference genes

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