Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 8.6e-218 760.0 371 100.0
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 7.5e-198 693.7 370 91.6
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 3.7e-197 691.4 365 91.2
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.3e-194 682.9 370 89.2
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 3.0e-194 681.8 365 89.3
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 6.6e-194 680.6 359 90.5
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 5.6e-193 677.6 358 90.8
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.4e-191 672.9 365 87.4
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.4e-190 668.3 365 87.1
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 1.7e-189 666.0 370 86.8
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 3.2e-188 661.8 360 86.4
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 9.2e-188 660.2 363 86.2
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.6e-187 659.4 386 84.5
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.6e-187 659.4 362 85.9
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 2.1e-187 659.1 361 86.7
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.1e-187 659.1 370 84.9
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 2.7e-187 658.7 357 86.3
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 2.7e-187 658.7 361 86.7
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 3.5e-187 658.3 362 87.0
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 3.5e-187 658.3 362 87.0
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 4.6e-187 657.9 370 84.9
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 6.0e-187 657.5 360 85.6
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 6.0e-187 657.5 360 87.8
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.7e-186 656.0 362 84.5
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.3e-186 655.6 361 86.4
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.1e-185 653.3 357 85.4
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.1e-185 653.3 363 86.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 1.1e-185 653.3 361 84.5
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.1e-185 653.3 357 85.4
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 1.1e-185 653.3 367 85.3
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.5e-185 652.9 357 85.7
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.9e-185 652.5 363 85.4
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 1.9e-185 652.5 365 83.3
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.3e-185 651.7 355 86.2
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 5.6e-185 651.0 367 85.3
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 7.3e-185 650.6 357 86.8
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.3e-185 650.6 353 87.0
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 9.6e-185 650.2 363 86.5
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 9.6e-185 650.2 356 86.8
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 2.1e-184 649.0 362 86.2
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.8e-184 648.7 357 86.0
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.1e-183 646.7 365 84.9
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.8e-183 646.0 365 84.1
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.8e-183 646.0 378 82.5
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.0e-183 644.8 357 84.6
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 5.2e-183 644.4 365 83.6
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 6.8e-183 644.0 369 81.8
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 6.8e-183 644.0 356 86.0
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.2e-182 643.3 369 83.5
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.2e-182 643.3 362 83.1
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.5e-182 642.9 356 85.1
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 4.4e-182 641.3 361 83.7
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 7.6e-182 640.6 360 84.4
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 7.6e-182 640.6 360 84.4
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 1.3e-181 639.8 359 84.1
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 2.2e-181 639.0 356 84.8
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 2.9e-181 638.6 363 82.9
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 2.9e-181 638.6 356 84.3
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.8e-181 638.3 356 84.0
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 4.9e-181 637.9 366 82.2
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 8.4e-181 637.1 366 83.1
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.4e-180 636.3 359 82.7
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 3.2e-180 635.2 366 83.1
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 5.4e-180 634.4 366 82.0
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 7.1e-180 634.0 376 81.4
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 9.3e-180 633.6 357 84.0
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.2e-179 633.3 353 84.1
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 3.5e-179 631.7 365 81.4
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 3.5e-179 631.7 362 82.0
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 6.0e-179 630.9 353 83.3
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 6.0e-179 630.9 362 82.0
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 6.0e-179 630.9 371 81.1
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 6.0e-179 630.9 358 84.4
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 6.0e-179 630.9 382 80.1
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 7.8e-179 630.6 367 81.7
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.7e-178 629.4 357 82.9
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 2.3e-178 629.0 379 79.9
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 3.9e-178 628.2 386 78.5
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 5.6e-177 624.4 369 79.4
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 9.6e-177 623.6 359 81.1
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.6e-176 622.9 369 79.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.8e-176 622.1 362 81.2
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 2.8e-176 622.1 359 80.5
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 6.2e-176 620.9 366 79.5
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.8e-175 619.4 361 80.3
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 4.0e-175 618.2 356 81.7
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.2e-174 616.7 356 80.6
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.5e-174 616.3 358 82.4
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 2.0e-174 615.9 364 79.9
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 4.4e-174 614.8 366 79.5
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 5.8e-174 614.4 364 79.9
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 1.3e-173 613.2 362 82.3
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.3e-173 613.2 343 84.5
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.2e-173 612.5 365 80.8
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.8e-173 611.7 371 78.2
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.1e-172 610.1 360 81.1
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.9e-172 609.4 371 77.9
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 2.1e-171 605.9 384 74.7
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 6.0e-171 604.4 371 78.7
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 3.0e-170 602.1 348 82.2
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.9e-170 601.7 368 78.3
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.9e-169 599.4 381 76.4
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 5.6e-169 597.8 366 78.4
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 6.2e-168 594.3 357 79.6
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.3e-167 591.3 367 77.4
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.3e-165 586.6 354 78.5
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.1e-163 579.3 436 68.3
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 2.7e-163 578.9 357 80.1
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 4.6e-163 578.2 365 76.4
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 7.9e-163 577.4 352 77.0
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.5e-161 573.2 361 74.2
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.9e-161 572.8 356 77.5
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.3e-161 572.0 367 73.0
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.8e-160 568.9 366 74.9
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 3.4e-158 562.0 354 76.6
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.0e-157 560.5 362 74.9
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.4e-156 556.6 371 72.2
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.8e-154 549.7 356 72.5
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 2.5e-153 545.8 353 72.8
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.3e-152 543.5 303 84.2
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.8e-152 542.3 356 73.3
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.1e-151 538.5 356 72.5
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 9.0e-151 537.3 359 70.8
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 2.6e-150 535.8 353 70.5
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.9e-148 529.6 364 72.3
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 9.3e-148 527.3 284 88.0
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 2.7e-147 525.8 362 72.1
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.2e-144 516.2 372 65.9
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.1e-140 503.8 290 81.7
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 2.8e-136 489.2 714 42.2
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.8e-135 486.5 347 66.3
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.3e-133 480.3 245 92.2
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 8.5e-133 477.6 362 66.6
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 1.6e-131 473.4 347 65.4
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.9e-124 449.9 312 67.6
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.2e-124 449.1 331 61.3
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.9e-117 426.0 264 75.8
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.2e-114 415.2 239 81.6
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.7e-112 410.2 358 56.1
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.0e-106 391.0 334 60.5
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 2.0e-102 376.7 227 78.4
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.7e-97 358.6 338 55.6
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 1.7e-93 347.1 251 63.7
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 2.0e-86 323.6 202 77.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 3.0e-85 319.7 291 58.8
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 2.3e-53 213.8 138 75.4
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.1e-47 194.9 100 93.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 9.3e-47 191.8 127 76.4
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 7.9e-46 188.7 105 88.6
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 7.9e-46 188.7 127 75.6
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 2.3e-45 187.2 127 75.6
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 3.0e-45 186.8 127 75.6
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 6.2e-43 179.1 114 74.6
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 8.1e-43 178.7 126 72.2
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.4e-42 177.2 171 52.0
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-40 171.0 98 81.6
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.1e-38 164.1 126 64.3
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.3e-35 152.5 111 66.7
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 6.5e-32 142.5 131 56.5
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 2.6e-25 120.6 69 84.1
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.2e-23 113.2 73 76.7
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 7.2e-23 112.5 68 79.4
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 9.4e-23 112.1 75 72.0
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.7e-19 101.3 71 69.0
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.2e-19 99.0 61 77.0
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 5.9e-17 92.8 84 57.1
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 9.4e-15 85.5 130 43.1
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 3.6e-14 83.6 71 59.2
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.6e-12 77.4 46 71.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 2.2e-08 64.3 41 73.2
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 1.6e-06 58.2 31 87.1


User provided reference genes

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