Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 3.3e-71 271.6 131 100.0
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.3e-67 259.6 129 96.1
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.2e-62 243.0 130 86.2
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 2.1e-62 242.3 131 86.3
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.1e-61 240.0 129 85.3
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.2e-60 236.5 131 82.4
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 1.2e-60 236.5 129 83.7
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 2.6e-60 235.3 129 82.2
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 7.5e-60 233.8 127 85.0
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 7.5e-60 233.8 127 85.0
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 9.8e-60 233.4 127 85.0
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.3e-59 233.0 126 85.7
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.7e-59 232.6 126 84.9
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.2e-59 232.3 128 85.2
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 2.2e-59 232.3 131 81.7
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 2.9e-59 231.9 132 84.8
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 3.7e-59 231.5 127 82.7
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 6.4e-59 230.7 129 82.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 8.3e-59 230.3 131 81.7
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 8.3e-59 230.3 131 81.7
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.1e-58 229.9 129 79.1
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.1e-58 229.9 129 81.4
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.4e-58 229.6 131 80.9
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 3.2e-58 228.4 128 80.5
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 3.2e-58 228.4 128 81.2
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 4.1e-58 228.0 129 81.4
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 5.4e-58 227.6 129 81.4
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 5.4e-58 227.6 130 80.8
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 7.1e-58 227.3 128 80.5
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 9.2e-58 226.9 131 80.9
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.2e-57 226.5 127 81.9
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.6e-57 226.1 129 82.9
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 2.1e-57 225.7 128 82.0
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 2.1e-57 225.7 131 81.7
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 6.0e-57 224.2 129 79.1
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.0e-56 223.4 128 78.1
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.3e-56 223.0 128 78.1
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.3e-56 223.0 129 78.3
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 1.3e-56 223.0 128 79.7
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.3e-56 222.2 121 86.0
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 2.3e-56 222.2 129 76.7
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 3.0e-56 221.9 128 78.1
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 3.9e-56 221.5 128 78.9
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 3.9e-56 221.5 126 77.8
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.1e-56 221.1 130 78.5
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 6.6e-56 220.7 128 77.3
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 8.6e-56 220.3 128 78.9
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.1e-55 219.9 130 77.7
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 1.5e-55 219.5 127 78.7
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.9e-55 219.2 130 77.7
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.9e-55 219.2 130 79.2
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 2.5e-55 218.8 127 77.2
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 2.5e-55 218.8 129 76.0
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 7.3e-55 217.2 126 77.0
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 7.3e-55 217.2 129 74.4
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 9.5e-55 216.9 130 76.9
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 1.6e-54 216.1 128 77.3
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 1.6e-54 216.1 127 78.7
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 1.6e-54 216.1 165 64.2
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 2.1e-54 215.7 126 75.4
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.1e-54 215.7 130 76.9
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 2.8e-54 215.3 127 73.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 2.8e-54 215.3 129 76.7
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 3.6e-54 214.9 124 79.8
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 4.7e-54 214.5 128 75.0
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 4.7e-54 214.5 128 75.0
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 4.7e-54 214.5 126 79.4
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 4.7e-54 214.5 126 77.8
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 1.8e-53 212.6 128 74.2
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 3.1e-53 211.8 126 75.4
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 3.1e-53 211.8 126 75.4
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 3.1e-53 211.8 129 74.4
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 3.1e-53 211.8 128 74.2
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 4.0e-53 211.5 128 73.4
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 5.2e-53 211.1 130 72.3
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 5.2e-53 211.1 128 73.4
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 5.2e-53 211.1 128 72.7
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 5.2e-53 211.1 127 76.4
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.2e-52 209.9 130 71.5
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.2e-52 209.9 130 71.5
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.2e-52 209.9 130 71.5
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.2e-52 209.9 130 71.5
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.2e-52 209.9 130 71.5
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.2e-52 209.9 126 77.0
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 5.8e-52 207.6 124 75.8
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 1.7e-51 206.1 126 71.4
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 4.9e-51 204.5 129 72.1
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 6.4e-51 204.1 129 72.1
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 8.4e-51 203.8 130 72.3
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 4.1e-50 201.4 130 67.7
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 6.0e-49 197.6 113 82.3
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 7.3e-47 190.7 113 77.9
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.2e-46 189.9 130 67.7
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.6e-46 189.5 127 67.7
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 8.1e-46 187.2 125 65.6
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 1.2e-44 183.3 128 64.8
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.4e-43 177.6 131 58.8
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 9.3e-42 173.7 116 65.5
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.7e-40 169.5 125 60.0
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.9e-39 166.0 110 76.4
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 2.9e-35 152.1 125 55.2
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 4.6e-33 144.8 80 86.2
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 6.6e-32 141.0 114 58.8
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.3e-30 136.7 129 49.6
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.8e-30 135.6 157 45.9
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 4.8e-30 134.8 129 49.6
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 4.0e-29 131.7 118 51.7
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.0e-28 129.4 81 76.5
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 1.2e-25 120.2 75 73.3
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 7.4e-23 110.9 57 86.0
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.0e-19 100.5 68 70.6
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 2.5e-18 95.9 52 78.8
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.6e-17 93.2 53 77.4
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 2.1e-17 92.8 54 72.2
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.1e-17 92.8 54 72.2
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-08 62.4 43 67.4
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 5.1e-08 61.6 36 77.8
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.7e-08 61.2 43 65.1


User provided reference genes

Program Settings