Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia23930 Actinidia chinensis HOM05D000758 ORTHO05D001216 2.4e-144 515.4 246 100.0
CSS0004039 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 3.2e-27 126.3 103 63.1
Dinv00887 Davidia involucrata HOM05D000758 ORTHO05D001216 7.1e-27 125.2 104 61.5
CSS0005261 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 4.6e-26 122.5 104 61.5
Dinv17022 Davidia involucrata HOM05D000758 ORTHO05D001216 1.7e-25 120.6 104 58.7
Dinv43129 Davidia involucrata HOM05D000758 ORTHO05D001216 1.7e-25 120.6 104 58.7
Actinidia37193 Actinidia chinensis HOM05D000758 ORTHO05D001216 3.0e-25 119.8 103 59.2
Rhsim13G0081000 Rhododendron simsii HOM05D000758 ORTHO05D001216 1.9e-24 117.1 103 59.2
Actinidia07024 Actinidia chinensis HOM05D000758 ORTHO05D001216 2.5e-24 116.7 103 56.3
Rhsim13G0081300 Rhododendron simsii HOM05D000758 ORTHO05D001216 5.6e-24 115.5 103 58.3
vmacro03059 Vaccinium macrocarpon HOM05D000758 ORTHO05D001216 5.6e-24 115.5 103 58.3
Hma1.2p1_0615F.1_g189855 Hydrangea macrophylla HOM05D000758 ORTHO05D001216 2.0e-21 107.1 104 56.7
Atru.chr3.3982 Acer truncatum HOM05D000758 ORTHO05D001216 2.7e-18 96.7 104 51.9
Atru.chr3.3985 Acer truncatum HOM05D000758 ORTHO05D001216 2.7e-18 96.7 104 51.9
Hma1.2p1_1420F.1_g282320 Hydrangea macrophylla HOM05D000758 ORTHO05D001216 2.3e-17 93.6 103 52.4
Ciclev10027927m.g Citrus clementina HOM05D000758 ORTHO05D001216 3.3e-16 89.7 104 48.1
Lj2A1065T24 Lonicera japonica HOM05D000758 ORTHO05D001216 5.6e-16 89.0 106 48.1
Cpa.g.sc81.127 Carica papaya HOM05D000758 ORTHO05D001216 2.8e-15 86.7 103 47.6
TWI75G0926 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 8.1e-15 85.1 103 46.6
CiPaw.13G092400 Carya illinoinensis HOM05D000758 ORTHO05D001216 2.4e-14 83.6 103 46.6
TWI31G1035 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 2.4e-14 83.6 103 46.6
Peaxi162Scf00122g00157 Petunia axillaris HOM05D000758 ORTHO05D001216 3.1e-14 83.2 115 43.5
PGSC0003DMG400002138 Solanum tuberosum HOM05D000758 ORTHO05D001216 6.9e-14 82.0 105 45.7
COL.COLO4_18531 Corchorus olitorius HOM05D000758 ORTHO05D001216 1.5e-13 80.9 103 45.6
Duzib168G0294 Durio zibethinus HOM05D000758 ORTHO05D001216 2.6e-13 80.1 103 46.6
Nitab4.5_0007132g0010 Nicotiana tabacum HOM05D000758 ORTHO05D001216 2.6e-13 80.1 104 44.2
GSVIVG01024936001 Vitis vinifera HOM05D000758 ORTHO05D001216 2.6e-13 80.1 104 47.1
Thecc.09G319700 Theobroma cacao HOM05D000758 ORTHO05D001216 3.4e-13 79.7 103 45.6
QL01p031422 Quercus lobata HOM05D000758 ORTHO05D001216 4.5e-13 79.3 104 46.2
Sopen06g001550 Solanum pennellii HOM05D000758 ORTHO05D001216 5.8e-13 79.0 104 42.3
Gohir.D03G124000 Gossypium hirsutum HOM05D000758 ORTHO05D001216 9.9e-13 78.2 104 47.1
Gorai.003G130700 Gossypium raimondii HOM05D000758 ORTHO05D001216 9.9e-13 78.2 104 47.1
Solyc06g005590.4 Solanum lycopersicum HOM05D000758 ORTHO05D001216 9.9e-13 78.2 104 42.3
Nitab4.5_0000272g0060 Nicotiana tabacum HOM05D000758 ORTHO05D001216 1.7e-12 77.4 109 44.0
Cfa011519 Carpinus fangiana HOM05D000758 ORTHO05D001216 2.2e-12 77.0 103 44.7
Nn2g13376 Nelumbo nucifera HOM05D000758 ORTHO05D001216 2.2e-12 77.0 104 43.3
CANSAT54G2294 Cannabis sativa HOM05D000758 ORTHO05D001216 2.9e-12 76.6 102 43.1
Manes.01G172100 Manihot esculenta HOM05D000758 ORTHO05D001216 2.9e-12 76.6 102 42.2
Gohir.A03G043400 Gossypium hirsutum HOM05D000758 ORTHO05D001216 6.4e-12 75.5 104 46.2
vmacro14544 Vaccinium macrocarpon HOM05D000758 ORTHO05D001216 8.4e-12 75.1 108 43.5
vmacro22503 Vaccinium macrocarpon HOM05D000758 ORTHO05D001216 8.4e-12 75.1 108 43.5
Aqoxy1G00919 Aquilegia oxysepala HOM05D000758 ORTHO05D001216 1.1e-11 74.7 103 40.8
Lj1C149G8 Lonicera japonica HOM05D000758 ORTHO05D001216 1.1e-11 74.7 104 46.2
Sc12g0001420 Simmondsia chinensis HOM05D000758 ORTHO05D001216 1.1e-11 74.7 104 41.3
Haze_24117 Corylus avellana HOM05D000758 ORTHO05D001216 1.9e-11 73.9 103 44.7
Nn2g11144 Nelumbo nucifera HOM05D000758 ORTHO05D001216 4.2e-11 72.8 104 41.3
Oeu017399.2 Olea europaea HOM05D000758 ORTHO05D001216 4.2e-11 72.8 102 41.2
Prupe.6G074100 Prunus persica HOM05D000758 ORTHO05D001216 4.2e-11 72.8 102 43.1
Glyma.11G138700 Glycine max HOM05D000758 ORTHO05D001216 5.5e-11 72.4 102 40.2
Duzib150G1153 Durio zibethinus HOM05D000758 ORTHO05D001216 9.3e-11 71.6 104 42.3
CiPaw.14G067700 Carya illinoinensis HOM05D000758 ORTHO05D001216 1.2e-10 71.2 104 42.3
MBI05_g28378_MAGBIO Magnolia biondii HOM05D000758 ORTHO05D001216 1.2e-10 71.2 104 39.4
Phvul.L006443 Phaseolus vulgaris HOM05D000758 ORTHO05D001216 1.2e-10 71.2 103 41.7
MD11G1099200 Malus domestica HOM05D000758 ORTHO05D001216 1.6e-10 70.9 102 39.2
TAR633G1047 Trochodendron aralioides HOM05D000758 ORTHO05D001216 2.1e-10 70.5 104 42.3
HanXRQChr02g0033201 Helianthus annuus HOM05D000758 ORTHO05D001216 2.7e-10 70.1 123 43.9
Sc21g0005880 Simmondsia chinensis HOM05D000758 ORTHO05D001216 2.7e-10 70.1 102 38.2
Potri.001G241600 Populus trichocarpa HOM05D000758 ORTHO05D001216 3.5e-10 69.7 104 43.3
Potri.009G032000 Populus trichocarpa HOM05D000758 ORTHO05D001216 4.6e-10 69.3 103 44.7
Rhsim01G0229600 Rhododendron simsii HOM05D000758 ORTHO05D001216 4.6e-10 69.3 108 43.5
arahy.Tifrunner.gnm1.ann1.18CGRH Arachis hypogaea HOM05D000758 ORTHO05D001216 6.0e-10 68.9 105 45.7
MSTRG.21208 Avicennia marina HOM05D000758 ORTHO05D001216 7.9e-10 68.6 103 39.8
Glyma.12G062300 Glycine max HOM05D000758 ORTHO05D001216 7.9e-10 68.6 102 38.2
MD03G1089900 Malus domestica HOM05D000758 ORTHO05D001216 1.3e-09 67.8 102 39.2
TWI79G0413 Tripterygium wilfordii HOM05D000758 ORTHO05D001216 1.3e-09 67.8 102 39.2
arahy.Tifrunner.gnm1.ann1.53UM4C Arachis hypogaea HOM05D000758 ORTHO05D001216 1.8e-09 67.4 105 44.8
Sed0021170 Sechium edule HOM05D000758 ORTHO05D001216 1.8e-09 67.4 104 41.3
AUR62001769 Chenopodium quinoa HOM05D000758 ORTHO05D001216 3.0e-09 66.6 102 39.2
Duzib170G0081 Durio zibethinus HOM05D000758 ORTHO05D001216 3.0e-09 66.6 103 42.7
MBI14_g12119_MAGBIO Magnolia biondii HOM05D000758 ORTHO05D001216 3.0e-09 66.6 107 40.2
Sabra09G0022700 Salix brachista HOM05D000758 ORTHO05D001216 3.0e-09 66.6 116 42.2
GSVIVG01016524001 Vitis vinifera HOM05D000758 ORTHO05D001216 3.9e-09 66.2 103 40.8
DCAR_005963 Daucus carota HOM05D000758 ORTHO05D001216 6.7e-09 65.5 105 40.0
AUR62009557 Chenopodium quinoa HOM05D000758 ORTHO05D001216 1.1e-08 64.7 102 38.2
VMungo1080G1285 Vigna mungo HOM05D000758 ORTHO05D001216 1.1e-08 64.7 84 45.2
DCAR_007442 Daucus carota HOM05D000758 ORTHO05D001216 1.5e-08 64.3 102 39.2
RcHm_v2.0_Chr5g0065401 Rosa chinensis HOM05D000758 ORTHO05D001216 1.5e-08 64.3 102 37.3
RcHm_v2.0_Chr5g0065451 Rosa chinensis HOM05D000758 ORTHO05D001216 1.5e-08 64.3 102 37.3
Lj3g0017284 Lotus japonicus HOM05D000758 ORTHO05D001216 1.9e-08 63.9 102 38.2
Peaxi162Scf00774g00021 Petunia axillaris HOM05D000758 ORTHO05D001216 1.9e-08 63.9 106 41.5
arahy.Tifrunner.gnm1.ann1.N9TR2Q Arachis hypogaea HOM05D000758 ORTHO05D001216 2.5e-08 63.5 103 40.8
Sed0025539 Sechium edule HOM05D000758 ORTHO05D001216 2.5e-08 63.5 103 40.8
Glyma.13G337100 Glycine max HOM05D000758 ORTHO05D001216 3.3e-08 63.2 104 38.5
Lsat_1_v5_gn_5_169961 Lactuca sativa HOM05D000758 ORTHO05D001216 3.3e-08 63.2 90 44.4
Oeu004160.1 Olea europaea HOM05D000758 ORTHO05D001216 3.3e-08 63.2 104 40.4
SalBow3G4359 Salvia bowleyana HOM05D000758 ORTHO05D001216 4.3e-08 62.8 104 35.6
Glyma.15G037300 Glycine max HOM05D000758 ORTHO05D001216 5.6e-08 62.4 104 38.5
Cc01_g13040 Coffea canephora HOM05D000758 ORTHO05D001216 9.6e-08 61.6 105 41.0
ClCG03G001390 Citrullus lanatus HOM05D000758 ORTHO05D001216 1.6e-07 60.8 104 40.4
Psat5g286760 Pisum sativum HOM05D000758 ORTHO05D001216 1.6e-07 60.8 103 38.8
TPR.G34287 Trifolium pratense HOM05D000758 ORTHO05D001216 1.6e-07 60.8 104 38.5
arahy.Tifrunner.gnm1.ann1.ZFP9XM Arachis hypogaea HOM05D000758 ORTHO05D001216 2.1e-07 60.5 103 38.8
CAN.G394.65 Capsicum annuum HOM05D000758 ORTHO05D001216 2.1e-07 60.5 93 43.0
Oeu026707.1 Olea europaea HOM05D000758 ORTHO05D001216 2.1e-07 60.5 103 40.8
Lj3g0023191 Lotus japonicus HOM05D000758 ORTHO05D001216 2.8e-07 60.1 103 36.9
QL08p059536 Quercus lobata HOM05D000758 ORTHO05D001216 2.8e-07 60.1 102 37.3
Manes.02G131166 Manihot esculenta HOM05D000758 ORTHO05D001216 3.7e-07 59.7 102 36.3
Hund04943 Selenicereus undatus HOM05D000758 ORTHO05D001216 3.7e-07 59.7 102 35.3
PGSC0003DMG400030324 Solanum tuberosum HOM05D000758 ORTHO05D001216 4.8e-07 59.3 93 40.9
VMungo1127G2242 Vigna mungo HOM05D000758 ORTHO05D002867 6.2e-07 58.9 101 34.7
CSS0010319 Camellia sinensis var. sinensis HOM05D000758 ORTHO05D001216 8.1e-07 58.5 104 35.6
ECA248G1165 Erigeron canadensis HOM05D000758 ORTHO05D001216 8.1e-07 58.5 104 43.3
Ca_01318_v3 Cicer arietinum L. HOM05D000758 ORTHO05D001216 1.4e-06 57.8 85 42.4
FvH4_3g36520 Fragaria vesca HOM05D000758 ORTHO05D001216 1.4e-06 57.8 102 37.3
FAN11G3031 Fragaria x ananassa HOM05D000758 ORTHO05D001216 1.4e-06 57.8 102 37.3
EL10Ac7g16036 Beta vulgaris HOM05D000758 ORTHO05D001216 1.8e-06 57.4 102 35.3
CiPaw.01G288800 Carya illinoinensis HOM05D000758 ORTHO05D001216 2.4e-06 57.0 105 38.1
Lalb_Chr01g0003601 Lupinus albus HOM05D000758 ORTHO05D001216 2.4e-06 57.0 101 38.6
Dinv26029 Davidia involucrata HOM05D000758 ORTHO05D001216 3.1e-06 56.6 103 35.9
Sabra16G0146100 Salix brachista HOM05D000758 ORTHO05D001216 3.1e-06 56.6 125 33.6
PSO063G2845 Papaver somniferum HOM05D000758 ORTHO05D001216 4.0e-06 56.2 109 36.7
PSO339G2542 Papaver somniferum HOM05D000758 ORTHO05D001216 4.0e-06 56.2 109 36.7
Oeu002427.1 Olea europaea HOM05D000758 ORTHO05D001216 6.9e-06 55.5 101 38.6
Solyc06g076270.3 Solanum lycopersicum HOM05D000758 ORTHO05D001216 6.9e-06 55.5 92 39.1
Sopen06g032700 Solanum pennellii HOM05D000758 ORTHO05D001216 6.9e-06 55.5 92 39.1
MELO3C020620.2 Cucumis melo HOM05D000758 ORTHO05D001216 9.0e-06 55.1 104 39.4
CsaV3_1G034410 Cucumis sativus L. HOM05D000758 ORTHO05D001216 9.0e-06 55.1 104 38.5


User provided reference genes

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