Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia21101 Actinidia chinensis HOM05D001026 ORTHO05D007776 2.8e-73 278.5 139 100.0
CSS0035433 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D007776 9.8e-42 173.7 106 78.3
CSS0044600 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D007776 9.8e-42 173.7 106 78.3
Rhsim01G0276100 Rhododendron simsii HOM05D001026 ORTHO05D007776 1.3e-41 173.3 106 78.3
vmacro14935 Vaccinium macrocarpon HOM05D001026 ORTHO05D007776 1.7e-41 172.9 106 78.3
Dinv32961 Davidia involucrata HOM05D000321 ORTHO05D000204 9.2e-40 167.2 106 75.5
QL12p022621 Quercus lobata HOM05D001026 ORTHO05D007776 6.8e-35 151.0 106 67.0
Hma1.2p1_0257F.1_g103780 Hydrangea macrophylla HOM05D001026 ORTHO05D007776 1.2e-34 150.2 106 66.0
MD11G1289600 Malus domestica HOM05D001026 ORTHO05D007776 4.1e-32 141.7 106 61.3
Lj2P1178T14 Lonicera japonica HOM05D001026 ORTHO05D007776 3.5e-31 138.7 106 64.2
Cfa006105 Carpinus fangiana HOM05D001026 ORTHO05D007776 2.3e-30 136.0 108 61.1
CiPaw.08G103200 Carya illinoinensis HOM05D001026 ORTHO05D007776 3.0e-30 135.6 105 62.9
Prupe.8G244800 Prunus persica HOM05D001026 ORTHO05D007776 3.9e-30 135.2 106 56.6
PGSC0003DMG400000954 Solanum tuberosum HOM05D001026 ORTHO05D007776 8.6e-30 134.0 106 60.4
Cc08_g00630 Coffea canephora HOM05D001026 ORTHO05D007776 2.5e-29 132.5 106 62.3
DCAR_002753 Daucus carota HOM05D001026 ORTHO05D007776 2.5e-29 132.5 110 58.2
MD03G1268800 Malus domestica HOM05D001026 ORTHO05D007776 3.3e-29 132.1 106 57.5
Peaxi162Scf00104g00022 Petunia axillaris HOM05D001026 ORTHO05D007776 4.3e-29 131.7 106 61.3
Haze_04745 Corylus avellana HOM05D001026 ORTHO05D007776 7.3e-29 131.0 108 57.4
EL10Ac3g06307 Beta vulgaris HOM05D001026 ORTHO05D007776 9.5e-29 130.6 106 56.6
Solyc09g064800.3 Solanum lycopersicum HOM05D001026 ORTHO05D007776 2.1e-28 129.4 106 58.5
Sopen09g026500 Solanum pennellii HOM05D001026 ORTHO05D007776 2.1e-28 129.4 106 58.5
Nitab4.5_0006180g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 2.8e-28 129.0 106 59.4
CAN.G79.69 Capsicum annuum HOM05D001026 ORTHO05D007776 1.1e-27 127.1 105 59.0
TAR362G0069 Trochodendron aralioides HOM05D001026 ORTHO05D007776 1.4e-27 126.7 106 59.4
Atru.chr5.1362 Acer truncatum HOM05D001026 ORTHO05D007776 4.0e-27 125.2 106 55.7
Aqoxy2G03248 Aquilegia oxysepala HOM05D001026 ORTHO05D007776 4.0e-27 125.2 106 58.5
MELO3C015861.2 Cucumis melo HOM05D001026 ORTHO05D007776 4.0e-27 125.2 105 60.0
Nitab4.5_0007392g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 5.2e-27 124.8 106 57.5
CsaV3_7G028580 Cucumis sativus L. HOM05D001026 ORTHO05D007776 8.9e-27 124.0 105 57.1
Sed0000979 Sechium edule HOM05D001026 ORTHO05D007776 1.2e-26 123.6 102 57.8
Nn4g26174 Nelumbo nucifera HOM05D001026 ORTHO05D007776 2.0e-26 122.9 106 55.7
CANSAT80G1415 Cannabis sativa HOM05D001026 ORTHO05D007776 2.6e-26 122.5 126 49.2
ClCG09G006860 Citrullus lanatus HOM05D001026 ORTHO05D007776 3.4e-26 122.1 105 59.0
Oeu000145.1 Olea europaea HOM05D001026 ORTHO05D007776 3.4e-26 122.1 106 55.7
TWI59G0008 Tripterygium wilfordii HOM05D001026 ORTHO05D007776 3.4e-26 122.1 106 58.5
Ah.07g204130 Amaranthus hybridus HOM05D001026 ORTHO05D007776 7.6e-26 120.9 110 54.5
PSO170G4311 Papaver somniferum HOM05D001026 ORTHO05D007776 1.3e-25 120.2 106 56.6
AUR62030031 Chenopodium quinoa HOM05D001026 ORTHO05D007776 1.7e-25 119.8 106 53.8
ECA247G0901 Erigeron canadensis HOM05D001026 ORTHO05D007776 4.9e-25 118.2 106 57.5
Manes.05G073400 Manihot esculenta HOM05D001026 ORTHO05D007776 4.9e-25 118.2 106 57.5
Aa31LG1G9220 Aethionema arabicum HOM05D001026 ORTHO05D007776 8.4e-25 117.5 106 51.9
AUR62002608 Chenopodium quinoa HOM05D001026 ORTHO05D007776 8.4e-25 117.5 106 50.0
MBI17_g12003_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D007776 1.9e-24 116.3 114 51.8
PSO407G0091 Papaver somniferum HOM05D001026 ORTHO05D007776 1.9e-24 116.3 107 56.1
Cpa.g.sc485.4 Carica papaya HOM05D001026 ORTHO05D007776 2.4e-24 115.9 106 50.0
Sabra02G0167800 Salix brachista HOM05D001026 ORTHO05D007776 2.4e-24 115.9 111 55.0
RcHm_v2.0_Chr6g0291581 Rosa chinensis HOM05D001026 ORTHO05D007776 3.2e-24 115.5 106 51.9
Hund18056 Selenicereus undatus HOM05D001026 ORTHO05D007776 3.2e-24 115.5 106 52.8
Ciclev10023436m.g Citrus clementina HOM05D001026 ORTHO05D007776 4.1e-24 115.2 106 51.9
THA.LOC104801221 Tarenaya hassleriana HOM05D001026 ORTHO05D007776 4.1e-24 115.2 106 50.9
SGA_v2.0_scaffold8G04456 Striga asiatica HOM05D001026 ORTHO05D007776 5.4e-24 114.8 107 54.2
Thecc.01G283700 Theobroma cacao HOM05D001026 ORTHO05D007776 9.2e-24 114.0 96 54.2
COL.COLO4_09141 Corchorus olitorius HOM05D001026 ORTHO05D007776 1.6e-23 113.2 93 55.9
Gohir.D11G125900 Gossypium hirsutum HOM05D001026 ORTHO05D007776 1.6e-23 113.2 107 54.2
Gorai.007G134600 Gossypium raimondii HOM05D001026 ORTHO05D007776 2.1e-23 112.8 107 54.2
Lsat_1_v5_gn_9_4440 Lactuca sativa HOM05D001026 ORTHO05D007776 2.7e-23 112.5 106 57.5
Sc06g0006960 Simmondsia chinensis HOM05D001026 ORTHO05D007776 3.5e-23 112.1 100 55.0
MSTRG.5199 Avicennia marina HOM05D001026 ORTHO05D007776 4.6e-23 111.7 105 52.4
Potri.002G219900 Populus trichocarpa HOM05D001026 ORTHO05D007776 6.0e-23 111.3 111 52.3
Duzib133G0154 Durio zibethinus HOM05D001026 ORTHO05D007776 7.8e-23 110.9 128 45.3
Sp1g02300 Schrenkiella parvula HOM05D001026 ORTHO05D007776 1.3e-22 110.2 111 49.5
AL1G12820 Arabidopsis lyrata HOM05D001026 ORTHO05D007776 1.7e-22 109.8 107 50.5
FvH4_2g23951 Fragaria vesca HOM05D001026 ORTHO05D007776 3.0e-22 109.0 106 50.9
FAN20G1656 Fragaria x ananassa HOM05D001026 ORTHO05D007776 3.0e-22 109.0 104 51.9
Gohir.D13G211742 Gossypium hirsutum HOM05D001026 ORTHO05D007776 3.9e-22 108.6 96 55.2
HanXRQChr15g0466461 Helianthus annuus HOM05D001026 ORTHO05D007776 3.9e-22 108.6 106 53.8
BraA08t35637Z Brassica rapa HOM05D001026 ORTHO05D007776 1.1e-21 107.1 111 50.5
CARHR002620 Cardamine hirsuta HOM05D001026 ORTHO05D007776 1.5e-21 106.7 107 50.5
C08p00520 Brassica napus HOM05D001026 ORTHO05D007776 1.9e-21 106.3 108 50.9
Eucgr.K03392 Eucalyptus grandis HOM05D001026 ORTHO05D007776 1.9e-21 106.3 106 51.9
BcaC07g36972 Brassica carinata HOM05D001026 ORTHO05D007776 2.5e-21 105.9 108 50.9
BolC8t46852H Brassica oleracea HOM05D001026 ORTHO05D007776 2.5e-21 105.9 108 50.9
CARHR005920 Cardamine hirsuta HOM05D001026 ORTHO05D007776 2.5e-21 105.9 103 52.4
AT1G03310 Arabidopsis thaliana HOM05D001026 ORTHO05D007776 3.3e-21 105.5 107 48.6
Duzib138G1494 Durio zibethinus HOM05D001026 ORTHO05D007776 3.3e-21 105.5 107 49.5
Carub.0001s0242 Capsella rubella HOM05D001026 ORTHO05D007776 4.3e-21 105.1 107 48.6
FAN24G3460 Fragaria x ananassa HOM05D001026 ORTHO05D007776 4.3e-21 105.1 106 50.0
FAN15G0060 Fragaria x ananassa HOM05D001026 ORTHO05D007776 9.6e-21 104.0 104 50.0
BolC5t28961H Brassica oleracea HOM05D001026 ORTHO05D007776 2.8e-20 102.4 108 50.9
FAN27G1002 Fragaria x ananassa HOM05D001026 ORTHO05D007776 2.8e-20 102.4 82 56.1
C05p01830 Brassica napus HOM05D001026 ORTHO05D007776 3.6e-20 102.1 108 50.0
A10p01850 Brassica napus HOM05D001026 ORTHO05D007776 4.7e-20 101.7 108 50.0
BraA10t42459Z Brassica rapa HOM05D001026 ORTHO05D007776 4.7e-20 101.7 108 50.0
BcaC05g24643 Brassica carinata HOM05D001026 ORTHO05D007776 1.8e-19 99.8 108 49.1
Migut.N00854 Erythranthe guttata HOM05D001026 ORTHO05D007776 1.8e-19 99.8 105 53.3
Thhalv10006762m.g Eutrema salsugineum HOM05D001026 ORTHO05D007776 2.4e-19 99.4 107 47.7
VMungo1383G3283 Vigna mungo HOM05D001026 ORTHO05D007776 6.8e-19 97.8 105 46.7
Glyma.19G153700 Glycine max HOM05D001026 ORTHO05D007776 8.9e-19 97.4 106 47.2
Glyma.03G151200 Glycine max HOM05D001026 ORTHO05D007776 1.5e-18 96.7 107 47.7
BcaC05g24547 Brassica carinata HOM05D001026 ORTHO05D007776 3.4e-18 95.5 108 49.1
A08p37400 Brassica napus HOM05D001026 ORTHO05D007776 3.4e-18 95.5 108 48.1
Medtr7g094560 Medicago truncatula HOM05D001026 ORTHO05D007776 4.4e-18 95.1 94 51.1
Phvul.001G148700 Phaseolus vulgaris HOM05D001026 ORTHO05D007776 1.3e-17 93.6 105 45.7
Lj1g0013086 Lotus japonicus HOM05D001026 ORTHO05D007776 1.7e-17 93.2 94 51.1
unitig_747.g21274 Utricularia gibba HOM05D001026 ORTHO05D007776 2.2e-17 92.8 110 49.1
TPR.G18118 Trifolium pratense HOM05D001026 ORTHO05D007776 2.9e-17 92.4 94 50.0
Ca_08568_v3 Cicer arietinum L. HOM05D001026 ORTHO05D007776 4.9e-17 91.7 83 53.0
Phvul.005G040300 Phaseolus vulgaris HOM05D001026 ORTHO05D007776 4.9e-17 91.7 79 55.7
CDE02G1450 Ceratophyllum demersum HOM05D001026 ORTHO05D007776 1.9e-16 89.7 89 50.6
Psat3g063520 Pisum sativum HOM05D001026 ORTHO05D007776 2.4e-16 89.4 82 52.4
PGR044G0834 Punica granatum HOM05D001026 ORTHO05D007776 2.1e-15 86.3 106 46.2
Gohir.A11G120800 Gossypium hirsutum HOM05D001026 ORTHO05D007776 1.3e-14 83.6 96 46.9
ATR0171G036 Amborella trichopoda HOM05D001026 ORTHO05D007776 1.7e-14 83.2 113 39.8
Os05g0393700 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D007776 1.1e-13 80.5 72 52.8
Mapoly0105s0013 Marchantia polymorpha HOM05D001026 ORTHO05D007776 1.5e-13 80.1 111 35.1
SMO143G0219 Selaginella moellendorffii HOM05D001026 ORTHO05D007776 3.6e-12 75.5 111 36.9
Pp3c8_12820 Physcomitrium patens HOM05D001026 ORTHO05D007776 1.8e-11 73.2 112 33.0
Zm00001eb287400 Zea mays HOM05D001026 ORTHO05D007776 5.3e-11 71.6 74 47.3
SalBow1G2928 Salvia bowleyana HOM05D001026 ORTHO05D007776 2.2e-09 66.2 106 40.6
SalBow1G6883 Salvia bowleyana HOM05D001026 ORTHO05D007776 1.9e-08 63.2 48 54.2
CBR_g22242 Chara braunii HOM05D001026 ORTHO05D007776 5.4e-08 61.6 89 34.8


User provided reference genes

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