Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia20003 Actinidia chinensis HOM05D000245 ORTHO05D021158 2.6e-43 178.3 92 100.0
Actinidia21434 Actinidia chinensis HOM05D000245 ORTHO05D000020 4.2e-33 144.4 89 83.1
Dinv02023 Davidia involucrata HOM05D000245 ORTHO05D021158 2.3e-15 85.5 84 57.1
Dinv10040 Davidia involucrata HOM05D000245 ORTHO05D000020 4.0e-15 84.7 84 56.0
Dinv19668 Davidia involucrata HOM05D000245 ORTHO05D000020 4.0e-15 84.7 84 56.0
vmacro15137 Vaccinium macrocarpon HOM05D000245 ORTHO05D000020 1.5e-14 82.8 60 65.0
Actinidia25820 Actinidia chinensis HOM05D000245 ORTHO05D000020 7.5e-14 80.5 88 55.7
Rhsim01G0287500 Rhododendron simsii HOM05D000245 ORTHO05D000020 1.3e-13 79.7 60 65.0
Dinv33076 Davidia involucrata HOM05D000245 ORTHO05D000020 2.8e-13 78.6 63 61.9
Actinidia21025 Actinidia chinensis HOM05D000245 ORTHO05D000020 3.7e-13 78.2 85 55.3
Eucgr.H01085 Eucalyptus grandis HOM05D000245 ORTHO05D000020 8.3e-13 77.0 68 55.9
CSS0031448 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 1.1e-12 76.6 83 54.2
HanXRQChr06g0167701 Helianthus annuus HOM05D000245 ORTHO05D000020 1.2e-11 73.2 77 51.9
CSS0035247 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 2.0e-11 72.4 54 66.7
Oeu008343.1 Olea europaea HOM05D000245 ORTHO05D000020 2.0e-11 72.4 61 60.7
Oeu008345.1 Olea europaea HOM05D000245 ORTHO05D000020 2.0e-11 72.4 74 55.4
Nitab4.5_0000803g0030 Nicotiana tabacum HOM05D000245 ORTHO05D000020 2.7e-11 72.0 63 57.1
Hund05450 Selenicereus undatus HOM05D000245 ORTHO05D000020 5.9e-11 70.9 93 47.3
Nitab4.5_0000116g0330 Nicotiana tabacum HOM05D000245 ORTHO05D000020 7.8e-11 70.5 65 56.9
PGR119G0257 Punica granatum HOM05D000245 ORTHO05D000020 7.8e-11 70.5 60 60.0
MD11G1306500 Malus domestica HOM05D000245 ORTHO05D000020 1.0e-10 70.1 56 62.5
Cc01_g21090 Coffea canephora HOM05D000245 ORTHO05D000020 1.3e-10 69.7 61 57.4
CAN.G862.63 Capsicum annuum HOM05D000245 ORTHO05D000020 2.9e-10 68.6 61 57.4
TAR633G0380 Trochodendron aralioides HOM05D000245 ORTHO05D000020 2.9e-10 68.6 58 56.9
Peaxi162Scf00001g00352 Petunia axillaris HOM05D000245 ORTHO05D000020 6.6e-10 67.4 64 53.1
Sopen09g030200 Solanum pennellii HOM05D000245 ORTHO05D000020 8.6e-10 67.0 68 50.0
Solyc09g075420.3 Solanum lycopersicum HOM05D000245 ORTHO05D000020 1.1e-09 66.6 61 54.1
PGSC0003DMG400031795 Solanum tuberosum HOM05D000245 ORTHO05D000020 1.1e-09 66.6 61 54.1
TWI14G1013 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 1.5e-09 66.2 72 52.8
CiPaw.07G112200 Carya illinoinensis HOM05D000245 ORTHO05D000020 1.9e-09 65.9 71 52.1
AUR62008711 Chenopodium quinoa HOM05D000245 ORTHO05D000020 1.9e-09 65.9 58 56.9
AUR62025525 Chenopodium quinoa HOM05D000245 ORTHO05D000020 1.9e-09 65.9 63 54.0
Lj1C22T12 Lonicera japonica HOM05D000245 ORTHO05D000020 1.9e-09 65.9 78 47.4
HanXRQChr04g0114741 Helianthus annuus HOM05D000245 ORTHO05D000020 2.5e-09 65.5 63 50.8
GSVIVG01028050001 Vitis vinifera HOM05D000245 ORTHO05D000020 2.5e-09 65.5 84 52.4
MSTRG.18135 Avicennia marina HOM05D000245 ORTHO05D000020 3.3e-09 65.1 67 50.7
Duzib138G0004 Durio zibethinus HOM05D000245 ORTHO05D000020 4.3e-09 64.7 60 56.7
Ah.15g093020 Amaranthus hybridus HOM05D000245 ORTHO05D000020 5.6e-09 64.3 60 51.7
AUR62043487 Chenopodium quinoa HOM05D000245 ORTHO05D000020 5.6e-09 64.3 58 55.2
Duzib133G0934 Durio zibethinus HOM05D000245 ORTHO05D000020 5.6e-09 64.3 81 48.1
FAN15G3494 Fragaria x ananassa HOM05D000245 ORTHO05D000020 5.6e-09 64.3 86 46.5
Lsat_1_v5_gn_8_164520 Lactuca sativa HOM05D000245 ORTHO05D000020 7.3e-09 63.9 67 49.3
Thecc.01G305800 Theobroma cacao HOM05D000245 ORTHO05D000020 7.3e-09 63.9 60 56.7
Glyma.10G016500 Glycine max HOM05D000245 ORTHO05D000020 9.5e-09 63.5 59 54.2
TAR362G0701 Trochodendron aralioides HOM05D000245 ORTHO05D000020 9.5e-09 63.5 58 53.4
MSTRG.21648 Avicennia marina HOM05D000245 ORTHO05D000020 1.2e-08 63.2 55 56.4
COL.COLO4_23306 Corchorus olitorius HOM05D000245 ORTHO05D000020 1.2e-08 63.2 82 47.6
Potri.014G126100 Populus trichocarpa HOM05D000245 ORTHO05D000020 1.2e-08 63.2 62 59.7
Hma1.2p1_0494F.1_g165440 Hydrangea macrophylla HOM05D000245 ORTHO05D000020 1.6e-08 62.8 86 48.8
Potri.002G201600 Populus trichocarpa HOM05D000245 ORTHO05D000020 1.6e-08 62.8 90 46.7
Haze_04979 Corylus avellana HOM05D000245 ORTHO05D000020 2.1e-08 62.4 67 50.7
Migut.D00130 Erythranthe guttata HOM05D000245 ORTHO05D000020 2.1e-08 62.4 60 56.7
Gohir.D08G139100 Gossypium hirsutum HOM05D000245 ORTHO05D000020 2.1e-08 62.4 59 55.9
Gorai.004G142800 Gossypium raimondii HOM05D000245 ORTHO05D000020 2.1e-08 62.4 59 55.9
DCAR_018316 Daucus carota HOM05D000245 ORTHO05D000020 3.6e-08 61.6 70 51.4
Sed0016897 Sechium edule HOM05D000245 ORTHO05D000020 4.7e-08 61.2 83 43.4
Sc17g0003030 Simmondsia chinensis HOM05D000245 ORTHO05D000020 4.7e-08 61.2 84 45.2
RcHm_v2.0_Chr6g0294441 Rosa chinensis HOM05D000245 ORTHO05D000020 6.1e-08 60.8 83 43.4
Sabra02G0157400 Salix brachista HOM05D000245 ORTHO05D000020 6.1e-08 60.8 82 46.3
ClCG10G011120 Citrullus lanatus HOM05D000245 ORTHO05D000020 8.0e-08 60.5 80 47.5
MELO3C017940.2 Cucumis melo HOM05D000245 ORTHO05D000020 8.0e-08 60.5 83 44.6
FvH4_2g26080 Fragaria vesca HOM05D000245 ORTHO05D000020 8.0e-08 60.5 78 48.7
FAN24G2143 Fragaria x ananassa HOM05D000245 ORTHO05D000020 8.0e-08 60.5 78 48.7
Thecc.01G305200 Theobroma cacao HOM05D000245 ORTHO05D000020 8.0e-08 60.5 85 43.5
ECA236G1351 Erigeron canadensis HOM05D000245 ORTHO05D000020 1.0e-07 60.1 67 53.7
FAN27G1186 Fragaria x ananassa HOM05D000245 ORTHO05D000020 1.0e-07 60.1 75 48.0
Gohir.A08G118100 Gossypium hirsutum HOM05D000245 ORTHO05D000020 1.0e-07 60.1 59 52.5
QL08p052215 Quercus lobata HOM05D000245 ORTHO05D021158 1.0e-07 60.1 86 44.2
MSTRG.21649 Avicennia marina HOM05D000245 ORTHO05D000020 1.4e-07 59.7 55 54.5
FAN20G2087 Fragaria x ananassa HOM05D000245 ORTHO05D000020 1.4e-07 59.7 75 48.0
VMungo0720G1171 Vigna mungo HOM05D000245 ORTHO05D000020 1.4e-07 59.7 85 42.4
CsaV3_4G000990 Cucumis sativus L. HOM05D000245 ORTHO05D000020 1.8e-07 59.3 83 44.6
Gohir.A08G041600 Gossypium hirsutum HOM05D000245 ORTHO05D000020 3.0e-07 58.5 62 51.6
Gorai.004G051600 Gossypium raimondii HOM05D000245 ORTHO05D000020 3.0e-07 58.5 62 51.6
Nn4g25739 Nelumbo nucifera HOM05D000245 ORTHO05D000020 3.0e-07 58.5 57 47.4
Prupe.8G264900 Prunus persica HOM05D000245 ORTHO05D000020 3.0e-07 58.5 77 46.8
THA.LOC104802181 Tarenaya hassleriana HOM05D000245 ORTHO05D000020 3.0e-07 58.5 65 49.2
unitig_60.g25583 Utricularia gibba HOM05D000245 ORTHO05D000020 3.0e-07 58.5 63 50.8
Ah.03g147330 Amaranthus hybridus HOM05D000245 ORTHO05D021158 4.0e-07 58.2 55 50.9
Ah.08g213540 Amaranthus hybridus HOM05D001493 ORTHO05D000020 4.0e-07 58.2 59 49.2
Cpa.g.sc151.30 Carica papaya HOM05D000245 ORTHO05D000020 4.0e-07 58.2 54 57.4
Duzib138G0617 Durio zibethinus HOM05D000245 ORTHO05D000020 4.0e-07 58.2 92 43.5
Manes.01G222600 Manihot esculenta HOM05D000245 ORTHO05D000020 4.0e-07 58.2 58 55.2
QL12p027792 Quercus lobata HOM05D000245 ORTHO05D000020 4.0e-07 58.2 85 43.5
CANSAT25G2954 Cannabis sativa HOM05D000245 ORTHO05D000020 5.2e-07 57.8 81 42.0
DCAR_005784 Daucus carota HOM05D000245 ORTHO05D000020 5.2e-07 57.8 60 50.0
Thecc.01G305400 Theobroma cacao HOM05D000245 ORTHO05D000020 8.9e-07 57.0 85 42.4
Cfa005868 Carpinus fangiana HOM05D000245 ORTHO05D000020 1.2e-06 56.6 84 44.0
Gohir.D08G051700 Gossypium hirsutum HOM05D000245 ORTHO05D000020 1.2e-06 56.6 58 50.0
PSO170G1965 Papaver somniferum HOM05D000245 ORTHO05D000020 1.5e-06 56.2 76 40.8
THA.LOC104817479 Tarenaya hassleriana HOM05D000245 ORTHO05D000020 1.5e-06 56.2 60 46.7
EL10Ac7g17571 Beta vulgaris HOM05D000245 ORTHO05D000020 2.0e-06 55.8 82 42.7
Aqoxy2G02880 Aquilegia oxysepala HOM05D000245 ORTHO05D000020 2.6e-06 55.5 63 50.8
Psat6g163880 Pisum sativum HOM05D000245 ORTHO05D000020 2.6e-06 55.5 54 51.9
SGA_v2.0_scaffold2G01381 Striga asiatica HOM05D000245 ORTHO05D000020 2.6e-06 55.5 57 47.4
Ca_10317_v3 Cicer arietinum L. HOM05D000245 ORTHO05D021158 3.4e-06 55.1 54 51.9
Glyma.02G016100 Glycine max HOM05D000245 ORTHO05D000020 3.4e-06 55.1 71 42.3
Lalb_Chr06g0166561 Lupinus albus HOM05D000245 ORTHO05D000020 3.4e-06 55.1 80 40.0
Phvul.007G217800 Phaseolus vulgaris HOM05D000245 ORTHO05D000020 3.4e-06 55.1 80 41.2
ATR0693G281 Amborella trichopoda HOM05D000245 ORTHO05D000020 4.4e-06 54.7 66 43.9
Ciclev10021059m.g Citrus clementina HOM05D000245 ORTHO05D000020 5.7e-06 54.3 59 47.5
BcaB06g29442 Brassica carinata HOM05D000245 ORTHO05D000020 7.5e-06 53.9 56 50.0
CDE11G0584 Ceratophyllum demersum HOM05D000245 ORTHO05D000020 7.5e-06 53.9 60 45.0
PSO407G0293 Papaver somniferum HOM05D000245 ORTHO05D000020 7.5e-06 53.9 74 40.5
Ah.02g117140 Amaranthus hybridus HOM05D000245 ORTHO05D021158 9.8e-06 53.5 57 47.4
TPR.G33964 Trifolium pratense HOM05D000245 ORTHO05D000020 9.8e-06 53.5 84 42.9


User provided reference genes

Program Settings