Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia09730 Actinidia chinensis HOM05D002380 ORTHO05D008286 6.7e-63 243.8 121 100.0
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.4e-31 139.8 123 64.2
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 4.9e-29 131.3 122 61.5
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 1.2e-24 116.7 116 57.8
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 1.0e-23 113.6 123 56.9
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 2.3e-23 112.5 116 57.8
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 1.2e-22 110.2 121 54.5
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.2e-22 110.2 123 52.8
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 2.6e-22 109.0 123 52.0
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 3.4e-22 108.6 123 52.0
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 5.8e-22 107.8 123 51.2
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 6.4e-21 104.4 123 50.4
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 1.4e-20 103.2 115 52.2
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.4e-20 103.2 121 49.6
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 1.4e-20 103.2 123 48.8
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 1.9e-20 102.8 109 53.2
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 2.4e-20 102.4 108 51.9
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 2.4e-20 102.4 104 55.8
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 3.2e-20 102.1 104 55.8
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 4.1e-20 101.7 105 54.3
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 4.1e-20 101.7 123 48.8
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 5.4e-20 101.3 109 54.1
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 5.4e-20 101.3 104 54.8
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 9.2e-20 100.5 105 53.3
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.2e-19 100.1 109 53.2
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.2e-19 100.1 109 53.2
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 1.6e-19 99.8 109 51.4
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 2.0e-19 99.4 104 54.8
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 2.7e-19 99.0 105 51.4
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 2.7e-19 99.0 106 52.8
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 3.5e-19 98.6 112 48.2
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 4.6e-19 98.2 104 51.9
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 6.0e-19 97.8 105 52.4
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 6.0e-19 97.8 105 54.3
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 7.8e-19 97.4 105 52.4
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 7.8e-19 97.4 105 54.3
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 7.8e-19 97.4 105 50.5
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 1.0e-18 97.1 107 52.3
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 1.3e-18 96.7 105 52.4
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 1.7e-18 96.3 105 50.5
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.7e-18 96.3 106 50.0
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 3.9e-18 95.1 105 49.5
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 3.9e-18 95.1 105 49.5
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.9e-18 95.1 109 54.1
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 3.9e-18 95.1 101 51.5
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 3.9e-18 95.1 106 51.9
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 3.9e-18 95.1 111 50.5
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 5.0e-18 94.7 105 50.5
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 5.0e-18 94.7 105 50.5
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 5.0e-18 94.7 109 54.1
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 5.0e-18 94.7 109 54.1
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 5.0e-18 94.7 105 50.5
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 5.0e-18 94.7 105 50.5
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 6.6e-18 94.4 105 52.4
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 8.6e-18 94.0 105 52.4
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 8.6e-18 94.0 105 49.5
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 8.6e-18 94.0 106 51.9
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 8.6e-18 94.0 107 55.1
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 1.1e-17 93.6 106 51.9
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 1.1e-17 93.6 105 51.4
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.1e-17 93.6 105 49.5
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.1e-17 93.6 105 49.5
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 1.5e-17 93.2 105 51.4
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 1.5e-17 93.2 105 51.4
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 2.5e-17 92.4 103 51.5
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 2.5e-17 92.4 105 51.4
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 2.5e-17 92.4 105 49.5
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 2.5e-17 92.4 106 50.9
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 4.3e-17 91.7 105 48.6
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 4.3e-17 91.7 105 47.6
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 4.3e-17 91.7 113 48.7
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 9.5e-17 90.5 105 47.6
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 9.5e-17 90.5 110 50.0
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 9.5e-17 90.5 105 48.6
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 9.5e-17 90.5 105 51.4
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 9.5e-17 90.5 107 48.6
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 1.2e-16 90.1 105 47.6
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 1.6e-16 89.7 105 47.6
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 2.8e-16 89.0 105 50.5
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 6.2e-16 87.8 105 49.5
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 8.1e-16 87.4 106 47.2
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 8.1e-16 87.4 111 47.7
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 3.1e-15 85.5 105 49.5
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 1.2e-14 83.6 106 49.1
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 3.4e-14 82.0 105 47.6
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 9.8e-14 80.5 105 47.6
COL.COLO4_21854 Corchorus olitorius HOM05D002380 ORTHO05D008286 1.3e-13 80.1 97 46.4
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 1.7e-13 79.7 93 50.5
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 8.3e-13 77.4 108 43.5
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 8.3e-13 77.4 93 48.4
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 3.2e-12 75.5 105 39.0
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 3.2e-12 75.5 45 82.2
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 1.6e-11 73.2 44 79.5
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 1.3e-10 70.1 44 77.3
CBR_g12620 Chara braunii HOM05D005350 ORTHO05D008838 2.3e-10 69.3 104 38.5
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 2.3e-10 69.3 44 75.0
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 3.3e-09 65.5 41 70.7
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.5e-06 56.6 42 71.4


User provided reference genes

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