Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 3.9e-218 761.1 373 100.0
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 2.3e-170 602.4 373 79.1
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 5.5e-164 581.3 392 74.2
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 6.3e-160 567.8 436 67.9
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 6.5e-149 531.2 393 71.5
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 5.2e-146 521.5 385 67.8
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 1.8e-143 513.1 376 68.1
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 5.3e-143 511.5 377 68.4
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 5.3e-143 511.5 370 68.1
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.2e-142 510.4 368 69.0
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.3e-141 506.9 378 68.8
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 6.5e-141 504.6 367 70.0
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 1.1e-140 503.8 375 66.1
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.5e-140 503.4 380 68.4
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 3.2e-140 502.3 373 66.0
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 7.2e-140 501.1 389 65.8
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 7.2e-140 501.1 378 65.9
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 3.6e-139 498.8 363 68.6
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 1.4e-138 496.9 391 65.0
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.5e-137 493.4 357 68.9
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 4.4e-137 491.9 357 68.1
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 4.4e-137 491.9 377 66.3
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 5.7e-137 491.5 384 64.8
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.3e-136 490.3 374 65.8
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 4.8e-136 488.4 330 70.9
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 4.8e-136 488.4 368 65.5
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 6.3e-136 488.0 391 64.5
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 1.1e-135 487.3 330 71.2
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.4e-135 486.9 375 66.4
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.4e-135 486.1 368 65.8
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 3.1e-135 485.7 377 65.3
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 1.2e-134 483.8 372 65.3
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 2.7e-134 482.6 367 65.1
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 3.5e-134 482.3 347 68.3
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 3.5e-134 482.3 375 65.6
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 5.9e-134 481.5 389 64.0
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.9e-133 479.2 361 65.9
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.8e-133 478.8 364 67.0
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 5.0e-133 478.4 365 64.7
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 6.5e-133 478.0 375 65.6
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 8.5e-133 477.6 352 67.3
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.1e-132 477.2 360 63.9
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.1e-132 477.2 380 63.9
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 3.2e-132 475.7 351 64.4
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 7.2e-132 474.6 367 64.3
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 9.4e-132 474.2 365 65.8
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 1.6e-131 473.4 339 67.6
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.1e-131 473.0 372 62.1
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 2.7e-131 472.6 339 67.0
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 3.6e-131 472.2 324 67.3
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.4e-130 470.3 379 64.9
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.4e-130 470.3 333 68.2
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.3e-130 469.5 389 61.7
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 2.3e-130 469.5 361 64.8
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 5.2e-130 468.4 361 64.5
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 5.2e-130 468.4 398 59.8
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.0e-129 466.5 363 61.7
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 7.5e-129 464.5 345 64.9
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 9.8e-129 464.2 339 66.7
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.7e-128 463.4 364 61.5
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 2.2e-128 463.0 347 66.0
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.8e-128 462.6 361 63.7
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 8.3e-128 461.1 374 62.3
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.1e-127 460.7 327 70.3
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.4e-127 460.3 380 59.5
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 1.8e-127 459.9 389 62.2
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 3.1e-127 459.1 371 63.6
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.1e-127 459.1 374 61.8
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.1e-127 459.1 374 61.8
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 5.4e-127 458.4 345 67.8
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.4e-127 458.4 346 65.9
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 7.0e-127 458.0 353 64.9
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.0e-126 456.4 327 69.4
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 3.5e-126 455.7 327 69.1
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.0e-125 454.1 363 61.2
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.3e-125 453.8 352 65.3
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.7e-125 453.4 352 62.5
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 6.5e-125 451.4 349 65.0
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.5e-124 450.3 351 64.4
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 5.5e-124 448.4 357 64.7
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 1.2e-123 447.2 368 63.3
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 1.6e-123 446.8 377 61.5
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 2.1e-123 446.4 325 64.3
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 1.4e-122 443.7 351 62.1
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 8.9e-122 441.0 329 63.5
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 8.9e-122 441.0 316 65.2
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 3.7e-120 435.6 280 73.6
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 4.9e-120 435.3 270 75.6
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.1e-119 434.1 352 64.2
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.4e-119 433.7 397 58.2
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 9.2e-119 431.0 371 62.0
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 2.0e-118 429.9 358 63.7
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 5.9e-118 428.3 327 66.1
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 8.6e-117 424.5 283 71.4
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.3e-116 422.2 333 61.0
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 8.0e-115 417.9 327 65.4
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 3.4e-113 412.5 378 60.3
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 4.4e-113 412.1 282 70.6
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 7.8e-110 401.4 363 58.7
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 1.5e-108 397.1 379 55.9
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 4.7e-107 392.1 324 62.3
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 1.5e-105 387.1 332 62.3
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 4.9e-104 382.1 398 54.5
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 1.1e-103 380.9 351 58.1
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 5.6e-100 368.6 286 65.0
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.3e-96 357.5 327 58.4
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 8.3e-96 354.8 335 53.4
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 1.7e-93 347.1 305 54.8
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 3.4e-89 332.8 347 52.7
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 9.9e-89 331.3 295 55.9
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 1.7e-80 303.9 268 59.7
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 2.3e-77 293.5 301 50.2
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 7.3e-76 288.5 212 65.6
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 8.1e-75 285.0 282 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 2.7e-70 270.0 213 61.0
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.3e-64 251.1 285 41.8
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.2e-64 250.4 299 43.1
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 8.7e-61 238.4 293 44.7
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 3.2e-55 219.9 297 42.1
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 8.2e-51 205.3 129 76.0
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 3.8e-40 169.9 147 53.7
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 8.2e-35 152.1 90 76.7
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 2.9e-32 143.7 85 74.1
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.0e-28 131.0 199 38.2
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.5e-23 114.8 69 71.0
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.8e-13 81.3 61 62.3
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 2.2e-11 74.3 42 76.2
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 4.5e-09 66.6 74 48.6
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 4.7e-06 56.6 76 38.2


User provided reference genes

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