Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia06975 Actinidia chinensis HOM05D009394 ORTHO05D002431 2.3e-115 419.1 239 100.0
Rhsim13G0207800 Rhododendron simsii HOM05D002917 ORTHO05D002431 4.3e-13 79.3 84 50.0
Eucgr.J00684 Eucalyptus grandis HOM05D002917 ORTHO05D002431 9.0e-11 71.6 93 45.2
PGR119G1093 Punica granatum HOM05D002917 ORTHO05D002431 1.2e-10 71.2 94 42.6
Dinv15024 Davidia involucrata HOM05D002917 ORTHO05D002431 3.4e-10 69.7 58 56.9
Atru.chr3.2999 Acer truncatum HOM05D002917 ORTHO05D002431 4.5e-10 69.3 91 41.8
GSVIVG01037326001 Vitis vinifera HOM05D002917 ORTHO05D002431 7.7e-10 68.6 90 41.1
CSS0039673 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 1.0e-09 68.2 95 42.1
Haze_23253 Corylus avellana HOM05D002917 ORTHO05D002431 1.0e-09 68.2 94 42.6
CiPaw.13G149300 Carya illinoinensis HOM05D002917 ORTHO05D002431 1.3e-09 67.8 93 40.9
Ciclev10018107m.g Citrus clementina HOM05D002917 ORTHO05D002431 1.7e-09 67.4 90 42.2
Manes.02G136400 Manihot esculenta HOM05D002917 ORTHO05D002431 8.5e-09 65.1 92 41.3
Nn7g36760 Nelumbo nucifera HOM05D002917 ORTHO05D002431 8.5e-09 65.1 94 40.4
Thecc.09G247400 Theobroma cacao HOM05D002917 ORTHO05D002431 8.5e-09 65.1 83 45.8
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 1.4e-08 64.3 83 43.4
Glyma.15G055400 Glycine max HOM05D009394 ORTHO05D002431 1.9e-08 63.9 101 47.5
Lalb_Chr04g0249281 Lupinus albus HOM05D009394 ORTHO05D002431 1.9e-08 63.9 94 37.2
Phvul.008G202100 Phaseolus vulgaris HOM05D009394 ORTHO05D002431 1.9e-08 63.9 93 38.7
MBI19_g20793_MAGBIO Magnolia biondii HOM05D002917 ORTHO05D002431 3.2e-08 63.2 83 59.0
Prupe.4G264200 Prunus persica HOM05D002917 ORTHO05D002431 3.2e-08 63.2 94 38.3
Gohir.A09G110600 Gossypium hirsutum HOM05D009394 ORTHO05D002431 4.2e-08 62.8 82 42.7
Gohir.D09G107100 Gossypium hirsutum HOM05D009394 ORTHO05D002431 4.2e-08 62.8 82 42.7
Gorai.006G124700 Gossypium raimondii HOM05D009394 ORTHO05D002431 4.2e-08 62.8 82 42.7
QL01p016834 Quercus lobata HOM05D012161 ORTHO05D002431 4.2e-08 62.8 77 40.3
CANSAT54G1823 Cannabis sativa HOM05D002917 ORTHO05D002431 9.4e-08 61.6 95 40.0
AT5G19473 Arabidopsis thaliana HOM05D002917 ORTHO05D002431 1.2e-07 61.2 93 40.9
AL6G30970 Arabidopsis lyrata HOM05D002917 ORTHO05D002431 1.6e-07 60.8 86 47.7
Oeu032569.1 Olea europaea HOM05D002917 ORTHO05D002431 3.6e-07 59.7 89 40.4
LjContig00564g0021896 Lotus japonicus HOM05D009394 ORTHO05D002431 4.6e-07 59.3 62 46.8
COL.COLO4_24485 Corchorus olitorius HOM05D009394 ORTHO05D002431 7.9e-07 58.5 55 58.2
CSS0017424 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 1.0e-06 58.2 59 49.2
Potri.001G273300 Populus trichocarpa HOM05D002917 ORTHO05D002431 1.0e-06 58.2 89 40.4
CSS0010926 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 1.8e-06 57.4 61 49.2
Carub.0006s1781 Capsella rubella HOM05D002917 ORTHO05D002431 1.8e-06 57.4 86 43.0
CsaV3_6G038900 Cucumis sativus L. HOM05D009394 ORTHO05D002431 3.0e-06 56.6 61 45.9
MD03G1164700 Malus domestica HOM05D012161 ORTHO05D002431 3.9e-06 56.2 92 45.7
Aqoxy1G00393 Aquilegia oxysepala HOM05D002917 ORTHO05D002431 5.1e-06 55.8 85 34.1
Gohir.A08G010300 Gossypium hirsutum HOM05D009394 ORTHO05D002431 5.1e-06 55.8 33 69.7
Gohir.D08G020400 Gossypium hirsutum HOM05D009394 ORTHO05D002431 5.1e-06 55.8 33 69.7
Gorai.004G015000 Gossypium raimondii HOM05D009394 ORTHO05D002431 5.1e-06 55.8 41 56.1
arahy.Tifrunner.gnm1.ann1.NQ28YP Arachis hypogaea HOM05D009394 ORTHO05D002431 8.8e-06 55.1 40 55.0
arahy.Tifrunner.gnm1.ann1.S8RCCH Arachis hypogaea HOM05D009394 ORTHO05D002431 8.8e-06 55.1 40 55.0
Sabra16G0168400 Salix brachista HOM05D002917 ORTHO05D002431 8.8e-06 55.1 89 47.2
TPR.G16410 Trifolium pratense HOM05D009394 ORTHO05D002431 8.8e-06 55.1 36 61.1


User provided reference genes

Program Settings