Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia03984 Actinidia chinensis HOM05D004363 ORTHO05D005110 3.9e-218 761.1 379 100.0
Actinidia03876 Actinidia chinensis HOM05D004363 ORTHO05D005110 4.1e-143 511.9 257 98.8
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.6e-126 456.8 478 54.6
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 5.6e-124 448.4 500 51.4
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 8.4e-120 434.5 478 51.7
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 1.5e-113 413.7 483 49.5
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 3.4e-113 412.5 478 49.6
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 8.8e-101 371.3 478 45.6
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 1.1e-100 370.9 476 44.5
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.5e-100 369.8 488 44.5
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 4.8e-99 365.5 490 44.3
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 8.2e-99 364.8 473 45.7
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 5.3e-98 362.1 476 44.1
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 2.6e-97 359.8 485 43.7
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 2.6e-97 359.8 474 44.9
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 3.4e-97 359.4 474 44.3
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 7.7e-97 358.2 472 44.7
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 7.7e-97 358.2 473 44.8
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 1.3e-96 357.5 477 43.4
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 1.3e-96 357.5 467 43.0
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 1.7e-96 357.1 479 43.6
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 1.7e-96 357.1 474 43.7
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 5.0e-96 355.5 474 44.5
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 5.0e-96 355.5 475 43.2
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 5.0e-96 355.5 474 43.7
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 1.1e-95 354.4 473 42.5
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 2.5e-95 353.2 455 45.5
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 3.2e-95 352.8 478 42.1
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 4.2e-95 352.4 477 43.6
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 4.2e-95 352.4 473 42.7
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 4.2e-95 352.4 488 42.8
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 1.6e-94 350.5 468 42.1
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 3.6e-94 349.4 478 43.5
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 3.6e-94 349.4 477 43.6
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 6.1e-94 348.6 476 42.4
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 6.1e-94 348.6 486 42.2
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 1.4e-93 347.4 473 43.1
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 2.3e-93 346.7 474 41.6
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 3.0e-93 346.3 478 43.1
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 3.9e-93 345.9 472 41.3
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 1.1e-92 344.4 473 41.4
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 2.0e-92 343.6 475 43.6
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 4.4e-92 342.4 473 42.1
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 7.4e-92 341.7 476 42.2
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 4.8e-91 339.0 473 42.3
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 2.4e-90 336.7 492 39.8
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 4.1e-90 335.9 479 42.2
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 4.1e-90 335.9 478 42.7
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 4.1e-90 335.9 478 42.7
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 6.9e-90 335.1 425 44.7
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 6.9e-90 335.1 426 43.2
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 1.5e-89 334.0 473 41.2
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 1.5e-89 334.0 490 41.2
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.0e-89 333.6 478 42.5
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 2.6e-89 333.2 475 42.5
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 7.7e-89 331.6 458 41.9
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 1.0e-88 331.3 479 40.7
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.0e-88 331.3 478 42.3
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.3e-88 330.9 473 42.5
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 1.3e-88 330.9 485 41.2
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 5.0e-88 328.9 476 39.9
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 8.5e-88 328.2 485 42.1
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 8.5e-88 328.2 479 42.2
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.1e-87 327.8 485 42.1
Gohir.A04G054800 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.4e-87 327.4 473 42.1
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 2.5e-87 326.6 485 40.8
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 3.2e-87 326.2 471 40.8
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 5.5e-87 325.5 475 41.7
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 9.4e-87 324.7 471 41.0
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 1.2e-86 324.3 476 39.7
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 3.6e-86 322.8 479 39.9
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 6.1e-86 322.0 426 41.5
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 8.0e-86 321.6 428 44.2
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 1.8e-85 320.5 473 40.8
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 3.9e-85 319.3 475 40.8
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 6.7e-85 318.5 492 40.4
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 4.4e-84 315.8 473 42.9
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 5.7e-84 315.5 467 41.3
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 7.4e-84 315.1 452 42.9
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 1.4e-82 310.8 456 41.2
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 1.2e-81 307.8 472 39.0
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 5.9e-81 305.4 452 42.3
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 1.7e-80 303.9 456 41.2
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 1.7e-80 303.9 463 40.0
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 5.0e-80 302.4 452 42.0
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 6.1e-78 295.4 458 40.4
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 6.1e-78 295.4 458 40.2
TAR623G0254 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.4e-77 294.3 286 53.5
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 8.8e-77 291.6 445 40.2
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 1.2e-76 291.2 458 39.7
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 1.2e-76 291.2 475 38.7
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 2.6e-76 290.0 475 38.5
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 7.5e-76 288.5 471 39.9
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 1.3e-75 287.7 472 38.1
Nitab4.5_0001191g0010 Nicotiana tabacum HOM05D004363 ORTHO05D005110 1.3e-75 287.7 285 52.6
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 2.2e-75 287.0 472 37.9
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 3.7e-75 286.2 475 38.3
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 3.7e-75 286.2 475 38.3
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 6.3e-75 285.4 472 38.1
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 6.3e-75 285.4 472 38.1
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 1.1e-74 284.6 457 39.6
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 2.0e-73 280.4 446 39.9
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 3.4e-68 263.1 437 38.4
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 2.8e-67 260.0 478 35.4
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 1.4e-66 257.7 478 34.5
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.0e-64 251.5 475 33.9
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 2.5e-63 246.9 426 36.6
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 1.2e-57 228.0 473 34.2
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.5e-55 221.1 433 33.5
Nn3g20229 Nelumbo nucifera HOM05D004363 ORTHO05D005110 2.1e-46 190.7 167 56.9
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 1.1e-45 188.3 438 31.1
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 8.9e-45 185.3 287 40.1
Actinidia03877 Actinidia chinensis HOM05D004363 ORTHO05D005110 2.9e-43 180.3 92 97.8
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 1.4e-42 177.9 240 40.4
Cpa.g.sc104.13 Carica papaya HOM05D004363 ORTHO05D005110 1.9e-42 177.6 184 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 6.0e-41 172.6 241 36.5
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 1.9e-39 167.5 392 29.6
SEGI_22432 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.3e-35 154.8 224 38.4
CBR_g74641 Chara braunii HOM05D004363 ORTHO05D005110 2.3e-32 144.1 265 33.2
Cpa.g.sc104.16 Carica papaya HOM05D004363 ORTHO05D005110 4.3e-23 113.2 100 60.0
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 2.8e-14 84.0 81 51.9
SHI08961 Sapria himalayana HOM05D004363 ORTHO05D005110 1.4e-13 81.6 126 37.3
Haze_20157 Corylus avellana HOM05D004363 ORTHO05D005110 1.4e-10 71.6 61 59.0
ATR0820G261 Amborella trichopoda HOM05D004363 ORTHO05D005110 5.1e-08 63.2 97 40.2
Lalb_Chr02g0153261 Lupinus albus HOM05D004363 ORTHO05D005110 7.4e-07 59.3 60 51.7


User provided reference genes

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