Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia02211 Actinidia chinensis HOM05D003492 ORTHO05D005115 4.6e-103 377.9 188 100.0
Actinidia02220 Actinidia chinensis HOM05D003492 ORTHO05D005115 4.3e-24 115.5 63 90.5
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.9e-16 90.1 138 42.8
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 3.1e-14 82.8 99 50.5
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.1e-14 82.8 99 50.5
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.1e-14 82.8 99 50.5
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.1e-14 82.8 99 50.5
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 4.0e-14 82.4 99 49.5
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 5.3e-14 82.0 102 47.1
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 6.9e-14 81.6 102 48.0
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 6.9e-14 81.6 109 46.8
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 1.2e-13 80.9 102 46.1
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 1.2e-13 80.9 86 52.3
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 1.2e-13 80.9 102 48.0
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 1.5e-13 80.5 86 51.2
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 2.0e-13 80.1 101 47.5
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 2.0e-13 80.1 102 46.1
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 2.6e-13 79.7 102 46.1
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 3.4e-13 79.3 102 45.1
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 3.4e-13 79.3 86 51.2
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 5.8e-13 78.6 102 45.1
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 5.8e-13 78.6 86 48.8
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 7.6e-13 78.2 102 43.1
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 7.6e-13 78.2 102 44.1
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 7.6e-13 78.2 102 46.1
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 7.6e-13 78.2 86 50.0
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 9.9e-13 77.8 102 46.1
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 9.9e-13 77.8 86 50.0
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 9.9e-13 77.8 86 50.0
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 9.9e-13 77.8 86 50.0
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 9.9e-13 77.8 102 44.1
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.3e-12 77.4 102 44.1
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.3e-12 77.4 102 43.1
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.3e-12 77.4 86 50.0
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 1.3e-12 77.4 102 44.1
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.7e-12 77.0 102 42.2
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.7e-12 77.0 102 43.1
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 1.7e-12 77.0 102 43.1
Lj8A65G43 Lonicera japonica HOM05D003492 ORTHO05D005115 1.7e-12 77.0 86 48.8
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 2.2e-12 76.6 102 45.1
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 2.2e-12 76.6 102 44.1
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 2.2e-12 76.6 102 44.1
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 2.2e-12 76.6 102 44.1
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 2.2e-12 76.6 102 44.1
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 2.9e-12 76.3 102 43.1
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 3.8e-12 75.9 102 46.1
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 4.9e-12 75.5 86 51.2
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 4.9e-12 75.5 99 42.4
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 6.4e-12 75.1 85 48.2
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 1.1e-11 74.3 102 42.2
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 1.1e-11 74.3 102 42.2
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 1.1e-11 74.3 107 43.9
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.1e-11 74.3 101 45.5
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.1e-11 74.3 102 42.2
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.1e-11 74.3 86 46.5
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.1e-11 74.3 102 42.2
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 1.1e-11 74.3 86 47.7
CAN.G78.71 Capsicum annuum HOM05D003492 ORTHO05D005115 1.4e-11 73.9 86 51.2
Peaxi162Scf00284g00913 Petunia axillaris HOM05D003492 ORTHO05D005115 1.4e-11 73.9 101 45.5
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 1.4e-11 73.9 86 48.8
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 1.9e-11 73.6 102 42.2
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.9e-11 73.6 86 46.5
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 1.9e-11 73.6 102 42.2
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 1.9e-11 73.6 86 50.0
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 2.4e-11 73.2 101 42.6
CAN.G1193.3 Capsicum annuum HOM05D003492 ORTHO05D005115 4.2e-11 72.4 86 50.0
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 4.2e-11 72.4 86 45.3
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 5.4e-11 72.0 89 46.1
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 7.1e-11 71.6 83 47.0
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 1.2e-10 70.9 105 41.9
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 1.2e-10 70.9 105 41.9
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 1.6e-10 70.5 107 42.1
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 2.1e-10 70.1 102 40.2
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 2.1e-10 70.1 102 43.1
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 2.7e-10 69.7 101 42.6
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 3.5e-10 69.3 86 47.7
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 6.0e-10 68.6 86 44.2
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 7.9e-10 68.2 102 39.2
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 1.0e-09 67.8 101 41.6
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 1.0e-09 67.8 101 41.6
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.0e-09 67.8 86 44.2
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 1.8e-09 67.0 86 43.0
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 2.3e-09 66.6 86 44.2
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 2.3e-09 66.6 99 40.4
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 3.0e-09 66.2 101 39.6
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 3.0e-09 66.2 101 40.6
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 3.0e-09 66.2 86 43.0
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 3.9e-09 65.9 107 39.3
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 3.9e-09 65.9 142 32.4
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 6.7e-09 65.1 101 41.6
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 6.7e-09 65.1 83 44.6
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 6.7e-09 65.1 83 44.6
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 1.1e-08 64.3 113 38.1
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.1e-08 64.3 101 38.6
SHI03328 Sapria himalayana HOM05D003492 ORTHO05D005115 1.1e-08 64.3 96 40.6
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 1.5e-08 63.9 101 38.6
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 1.9e-08 63.5 102 35.3
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 9.6e-08 61.2 102 36.3
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 4.0e-06 55.8 86 37.2
SMO105G0008 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 4.0e-06 55.8 86 40.7
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 4.0e-06 55.8 86 40.7
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 5.3e-06 55.5 86 39.5
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 5.3e-06 55.5 157 29.3


User provided reference genes

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