Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 8.8e-135 485.0 237 100.0
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 5.2e-26 123.6 194 38.1
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 5.2e-26 123.6 128 46.1
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 3.3e-25 120.9 140 37.1
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 4.4e-25 120.6 128 46.1
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 6.3e-24 116.7 170 35.3
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 9.1e-23 112.8 128 39.8
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 2.0e-22 111.7 128 41.4
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 2.0e-22 111.7 128 39.1
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 3.5e-22 110.9 128 37.5
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 4.5e-22 110.5 128 39.8
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 4.5e-22 110.5 128 38.3
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 5.9e-22 110.2 128 39.1
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.0e-21 109.4 128 39.8
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.3e-21 109.0 128 38.3
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.3e-21 109.0 128 39.1
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.3e-21 109.0 128 39.1
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.7e-21 108.6 128 37.5
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.7e-21 108.6 128 38.3
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 2.9e-21 107.8 128 38.3
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.8e-21 107.5 128 37.5
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 3.8e-21 107.5 128 39.8
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 5.0e-21 107.1 128 35.2
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 5.0e-21 107.1 128 35.2
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 5.0e-21 107.1 128 36.7
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 6.5e-21 106.7 128 38.3
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 6.5e-21 106.7 128 35.9
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 6.5e-21 106.7 128 35.2
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 6.5e-21 106.7 128 38.3
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 8.5e-21 106.3 128 39.1
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 8.5e-21 106.3 128 35.9
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 8.5e-21 106.3 128 35.9
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 8.5e-21 106.3 128 37.5
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.1e-20 105.9 128 37.5
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.1e-20 105.9 129 40.3
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.9e-20 105.1 128 38.3
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 1.9e-20 105.1 128 37.5
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 2.5e-20 104.8 128 38.3
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 2.5e-20 104.8 172 33.7
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 2.5e-20 104.8 129 36.4
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 3.2e-20 104.4 128 35.2
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 3.2e-20 104.4 128 38.3
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 3.2e-20 104.4 128 34.4
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 3.2e-20 104.4 128 37.5
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 4.2e-20 104.0 128 37.5
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 4.2e-20 104.0 128 33.6
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 5.5e-20 103.6 128 36.7
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 7.2e-20 103.2 128 38.3
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 7.2e-20 103.2 128 34.4
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 7.2e-20 103.2 128 36.7
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 7.2e-20 103.2 128 33.6
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 9.4e-20 102.8 128 36.7
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 9.4e-20 102.8 128 32.8
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 9.4e-20 102.8 128 35.2
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.2e-19 102.4 128 35.9
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 2.1e-19 101.7 109 38.5
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 2.1e-19 101.7 128 37.5
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 2.7e-19 101.3 128 36.7
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 2.7e-19 101.3 129 38.8
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 3.6e-19 100.9 128 32.8
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 4.7e-19 100.5 128 35.9
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 4.7e-19 100.5 128 37.5
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 6.1e-19 100.1 128 35.2
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 6.1e-19 100.1 128 35.2
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 8.0e-19 99.8 109 39.4
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 8.0e-19 99.8 145 35.9
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 8.0e-19 99.8 128 37.5
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.0e-18 99.4 128 35.9
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 1.4e-18 99.0 128 35.9
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.4e-18 99.0 128 35.2
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 3.0e-18 97.8 128 35.2
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 3.0e-18 97.8 128 35.2
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 3.0e-18 97.8 128 35.2
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 4.0e-18 97.4 128 33.6
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 6.8e-18 96.7 192 30.7
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 8.8e-18 96.3 109 33.9
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 8.8e-18 96.3 128 33.6
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.2e-17 95.9 192 30.7
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 1.5e-17 95.5 192 30.2
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 1.5e-17 95.5 192 30.7
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 2.0e-17 95.1 192 30.7
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 2.0e-17 95.1 128 35.2
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 2.6e-17 94.7 128 35.2
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.6e-17 94.7 128 35.2
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 3.4e-17 94.4 101 35.6
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 5.7e-17 93.6 134 32.1
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 7.5e-17 93.2 128 35.9
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 7.5e-17 93.2 134 33.6
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.7e-16 92.0 128 34.4
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 3.7e-16 90.9 126 33.3
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 4.1e-15 87.4 156 28.8
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 5.2e-10 70.5 74 41.9
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 3.4e-09 67.8 109 29.4
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.7e-08 64.3 128 26.6
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 2.7e-06 58.2 109 28.4
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 3.5e-06 57.8 91 31.9
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 5.9e-06 57.0 75 36.0
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 7.7e-06 56.6 50 48.0


User provided reference genes

Program Settings