Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_26.3 Anthoceros agrestis HOM05D004931 ORTHO05D006579 1.9e-127 459.1 228 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2426 Anthoceros agrestis HOM05D004931 ORTHO05D006579 1.2e-124 449.9 223 99.6
Mapoly0005s0248 Marchantia polymorpha HOM05D004931 ORTHO05D006579 2.9e-91 339.0 223 74.0
SMO358G0085 Selaginella moellendorffii HOM05D004931 ORTHO05D006579 5.5e-90 334.7 223 70.9
AUR62028841 Chenopodium quinoa HOM05D004931 ORTHO05D006579 5.7e-87 324.7 223 72.2
AUR62005713 Chenopodium quinoa HOM05D004931 ORTHO05D006579 9.6e-87 323.9 223 72.2
Nn3g16276 Nelumbo nucifera HOM05D004931 ORTHO05D006579 9.6e-87 323.9 226 69.9
Cfa009447 Carpinus fangiana HOM05D004931 ORTHO05D006579 1.6e-86 323.2 225 70.2
Duzib248G0794 Durio zibethinus HOM05D004931 ORTHO05D006579 2.8e-86 322.4 226 69.0
PSO478G0594 Papaver somniferum HOM05D004931 ORTHO05D006579 3.7e-86 322.0 233 68.2
PSO017G2176 Papaver somniferum HOM05D004931 ORTHO05D006579 4.8e-86 321.6 233 67.8
THA.LOC104814207 Tarenaya hassleriana HOM05D004931 ORTHO05D006579 4.8e-86 321.6 217 69.6
ECA238G3692 Erigeron canadensis HOM05D004931 ORTHO05D006579 8.2e-86 320.9 227 69.2
FvH4_4g22670 Fragaria vesca HOM05D004931 ORTHO05D006579 2.4e-85 319.3 225 69.8
Os08g0537800 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D006579 3.1e-85 318.9 222 70.3
RcHm_v2.0_Chr4g0428911 Rosa chinensis HOM05D004931 ORTHO05D006579 4.0e-85 318.5 225 69.3
Pp3c5_2520 Physcomitrium patens HOM05D004931 ORTHO05D006579 6.9e-85 317.8 220 71.4
Prupe.1G215300 Prunus persica HOM05D004931 ORTHO05D006579 6.9e-85 317.8 225 68.4
MD00G1177400 Malus domestica HOM05D004931 ORTHO05D006579 9.0e-85 317.4 225 68.4
CiPaw.05G101400 Carya illinoinensis HOM05D004931 ORTHO05D006579 1.5e-84 316.6 226 69.9
COL.COLO4_21767 Corchorus olitorius HOM05D004931 ORTHO05D006579 1.5e-84 316.6 222 68.9
HanXRQChr17g0559151 Helianthus annuus HOM05D004931 ORTHO05D006579 1.5e-84 316.6 227 67.8
Lj6A838G27 Lonicera japonica HOM05D004931 ORTHO05D006579 1.5e-84 316.6 229 68.1
EL10Ac6g13609 Beta vulgaris HOM05D004931 ORTHO05D006579 2.0e-84 316.2 223 69.5
SEGI_13679 Sequoiadendron giganteum HOM05D004931 ORTHO05D006579 2.0e-84 316.2 226 69.5
Thecc.02G192700 Theobroma cacao HOM05D004931 ORTHO05D006579 2.0e-84 316.2 222 68.5
Actinidia34703 Actinidia chinensis HOM05D004931 ORTHO05D006579 3.4e-84 315.5 227 67.4
MSTRG.455 Avicennia marina HOM05D004931 ORTHO05D006579 3.4e-84 315.5 228 68.4
Cpa.g.sc38.82 Carica papaya HOM05D004931 ORTHO05D006579 3.4e-84 315.5 217 70.5
Potri.003G162600 Populus trichocarpa HOM05D004931 ORTHO05D006579 3.4e-84 315.5 222 69.4
TWI36G0173 Tripterygium wilfordii HOM05D004931 ORTHO05D006579 7.6e-84 314.3 232 67.2
Aqoxy5G03136 Aquilegia oxysepala HOM05D004931 ORTHO05D006579 1.0e-83 313.9 225 67.6
Ciclev10005352m.g Citrus clementina HOM05D004931 ORTHO05D006579 1.0e-83 313.9 226 69.0
MD13G1130400 Malus domestica HOM05D004931 ORTHO05D006579 1.0e-83 313.9 225 66.7
TAR622G0753 Trochodendron aralioides HOM05D004931 ORTHO05D006579 1.0e-83 313.9 225 67.6
Atru.chr12.1413 Acer truncatum HOM05D004931 ORTHO05D006579 1.3e-83 313.5 226 66.4
Sc14g0009240 Simmondsia chinensis HOM05D004931 ORTHO05D006579 1.3e-83 313.5 221 68.8
Gohir.D02G175400 Gossypium hirsutum HOM05D004931 ORTHO05D006579 1.7e-83 313.2 222 68.9
Gorai.005G197000 Gossypium raimondii HOM05D004931 ORTHO05D006579 1.7e-83 313.2 222 68.9
Pp3c6_24540 Physcomitrium patens HOM05D004931 ORTHO05D006579 1.7e-83 313.2 226 69.9
Potri.001G067400 Populus trichocarpa HOM05D004931 ORTHO05D006579 1.7e-83 313.2 222 68.5
CANSAT01G2308 Cannabis sativa HOM05D004931 ORTHO05D006579 2.2e-83 312.8 226 67.3
Haze_12500 Corylus avellana HOM05D004931 ORTHO05D006579 2.2e-83 312.8 226 69.0
HPP92_011736 Vanilla planifolia HOM05D004931 ORTHO05D006579 2.2e-83 312.8 227 68.3
MELO3C017814.2 Cucumis melo HOM05D004931 ORTHO05D006579 2.9e-83 312.4 221 68.8
Dinv06619 Davidia involucrata HOM05D004931 ORTHO05D006579 2.9e-83 312.4 227 67.0
Gohir.A03G152300 Gossypium hirsutum HOM05D004931 ORTHO05D006579 2.9e-83 312.4 222 68.5
BcaB03g12136 Brassica carinata HOM05D004931 ORTHO05D006579 3.8e-83 312.0 218 67.9
Cc11_g15020 Coffea canephora HOM05D004931 ORTHO05D006579 3.8e-83 312.0 226 65.5
Carub.0001s2655 Capsella rubella HOM05D004931 ORTHO05D006579 6.5e-83 311.2 216 68.5
Manes.08G101500 Manihot esculenta HOM05D004931 ORTHO05D006579 6.5e-83 311.2 226 66.8
CsaV3_4G002250 Cucumis sativus L. HOM05D004931 ORTHO05D006579 8.4e-83 310.8 221 68.8
GSVIVG01001087001 Vitis vinifera HOM05D004931 ORTHO05D006579 8.4e-83 310.8 228 68.4
AL1G41640 Arabidopsis lyrata HOM05D004931 ORTHO05D006579 1.4e-82 310.1 216 67.6
TAR374G0634 Trochodendron aralioides HOM05D004931 ORTHO05D006579 1.4e-82 310.1 226 66.4
CARHR027590 Cardamine hirsuta HOM05D004931 ORTHO05D006579 1.9e-82 309.7 216 67.6
Glyma.15G065800 Glycine max HOM05D004931 ORTHO05D006579 1.9e-82 309.7 225 67.1
CSS0024647 Camellia sinensis var. sinensis HOM05D004931 ORTHO05D006579 2.5e-82 309.3 225 67.1
Thhalv10008031m.g Eutrema salsugineum HOM05D004931 ORTHO05D006579 2.5e-82 309.3 216 67.6
Sed0000722 Sechium edule HOM05D004931 ORTHO05D006579 4.2e-82 308.5 230 66.1
SGA_v2.0_scaffold80G25951 Striga asiatica HOM05D004931 ORTHO05D006579 4.2e-82 308.5 224 69.2
AT1G28120 Arabidopsis thaliana HOM05D004931 ORTHO05D006579 7.1e-82 307.8 218 67.9
Sp1g24310 Schrenkiella parvula HOM05D004931 ORTHO05D006579 7.1e-82 307.8 216 68.1
PGR102G0149 Punica granatum HOM05D004931 ORTHO05D006579 9.3e-82 307.4 227 65.6
SGA_v2.0_scaffold81G25976 Striga asiatica HOM05D004931 ORTHO05D006579 9.3e-82 307.4 229 69.0
Lsat_1_v5_gn_2_17061 Lactuca sativa HOM05D004931 ORTHO05D006579 1.6e-81 306.6 234 63.7
vmacro10419 Vaccinium macrocarpon HOM05D004931 ORTHO05D006579 1.6e-81 306.6 242 62.4
Sopen04g017340 Solanum pennellii HOM05D004931 ORTHO05D006579 2.1e-81 306.2 225 67.1
BcaC01g00008 Brassica carinata HOM05D004931 ORTHO05D006579 2.7e-81 305.8 219 66.2
BolC3t19725H Brassica oleracea HOM05D004931 ORTHO05D006579 2.7e-81 305.8 219 66.2
Migut.K01057 Erythranthe guttata HOM05D004931 ORTHO05D006579 2.7e-81 305.8 227 67.4
Phvul.006G193900 Phaseolus vulgaris HOM05D004931 ORTHO05D006579 2.7e-81 305.8 225 67.1
CDE05G3195 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 4.6e-81 305.1 235 64.3
SalBow2G3164 Salvia bowleyana HOM05D004931 ORTHO05D006579 4.6e-81 305.1 239 64.0
VMungo0540G0694 Vigna mungo HOM05D004931 ORTHO05D006579 4.6e-81 305.1 225 67.6
CDE05G1203 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 7.9e-81 304.3 235 64.3
Solyc04g045480.3 Solanum lycopersicum HOM05D004931 ORTHO05D006579 7.9e-81 304.3 225 66.7
QL03p049374 Quercus lobata HOM05D004931 ORTHO05D006579 1.0e-80 303.9 247 63.2
Glyma.13G248100 Glycine max HOM05D004931 ORTHO05D006579 1.3e-80 303.5 225 66.7
Manes.09G188000 Manihot esculenta HOM05D004931 ORTHO05D006579 1.3e-80 303.5 226 65.9
Ca_00224_v3 Cicer arietinum L. HOM05D004931 ORTHO05D006579 1.8e-80 303.1 224 66.1
Aa31sc45G20 Aethionema arabicum HOM05D004931 ORTHO05D006579 3.9e-80 302.0 216 66.7
Lj6g0004184 Lotus japonicus HOM05D004931 ORTHO05D006579 3.9e-80 302.0 220 66.4
Psat1g210240 Pisum sativum HOM05D004931 ORTHO05D006579 3.9e-80 302.0 225 66.2
arahy.Tifrunner.gnm1.ann1.BF7HNV Arachis hypogaea HOM05D004931 ORTHO05D006579 8.7e-80 300.8 225 66.2
arahy.Tifrunner.gnm1.ann1.Q671IP Arachis hypogaea HOM05D004931 ORTHO05D006579 8.7e-80 300.8 225 66.2
Medtr2g011420 Medicago truncatula HOM05D004931 ORTHO05D006579 1.9e-79 299.7 221 66.1
Peaxi162Scf00128g01757 Petunia axillaris HOM05D004931 ORTHO05D006579 1.9e-79 299.7 249 61.8
Nitab4.5_0007183g0010 Nicotiana tabacum HOM05D004931 ORTHO05D006579 2.5e-79 299.3 228 64.9
unitig_8.g2895 Utricularia gibba HOM05D004931 ORTHO05D006579 2.5e-79 299.3 223 67.7
TPR.G19613 Trifolium pratense HOM05D004931 ORTHO05D006579 9.7e-79 297.4 221 65.2
CAN.G465.9 Capsicum annuum HOM05D004931 ORTHO05D006579 2.2e-78 296.2 246 61.0
Ah.02g131420 Amaranthus hybridus HOM05D004931 ORTHO05D006579 3.7e-78 295.4 222 65.8
C03p74760 Brassica napus HOM05D004931 ORTHO05D006579 3.1e-77 292.4 244 59.8
FAN17G1056 Fragaria x ananassa HOM05D004931 ORTHO05D006579 3.1e-77 292.4 207 68.6
BcaB03g13953 Brassica carinata HOM05D004931 ORTHO05D006579 4.1e-77 292.0 218 66.1
A08p25870 Brassica napus HOM05D004931 ORTHO05D006579 6.9e-77 291.2 243 59.3
ATR0582G144 Amborella trichopoda HOM05D004931 ORTHO05D006579 2.6e-76 289.3 219 63.5
ClCG07G011910 Citrullus lanatus HOM05D004931 ORTHO05D006579 3.4e-76 288.9 220 64.5
HPP92_011677 Vanilla planifolia HOM05D004931 ORTHO05D006579 1.3e-75 287.0 201 69.7
Rhsim09G0128100 Rhododendron simsii HOM05D004931 ORTHO05D006579 8.5e-75 284.3 278 54.0
DCAR_024966 Daucus carota HOM05D004931 ORTHO05D006579 4.2e-74 282.0 226 63.7
BraA08t34541Z Brassica rapa HOM05D004931 ORTHO05D006579 3.6e-73 278.9 243 58.0
Zm00001eb175560 Zea mays HOM05D004931 ORTHO05D006579 1.8e-72 276.6 228 63.2
BolC7t42231H Brassica oleracea HOM05D004931 ORTHO05D006579 2.3e-72 276.2 216 63.9
FAN07G1868 Fragaria x ananassa HOM05D004931 ORTHO05D006579 4.3e-71 271.9 221 62.4
Hund26708 Selenicereus undatus HOM05D004931 ORTHO05D006579 1.3e-70 270.4 193 66.3
C07p17280 Brassica napus HOM05D004931 ORTHO05D006579 6.3e-70 268.1 216 63.0
BcaC06g35334 Brassica carinata HOM05D004931 ORTHO05D006579 3.1e-69 265.8 216 62.0
Nitab4.5_0001408g0040 Nicotiana tabacum HOM05D004931 ORTHO05D006579 5.0e-67 258.5 184 67.9
MBI10_g42797_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 1.4e-66 256.9 220 56.8
Lalb_Chr15g0090151 Lupinus albus HOM05D004931 ORTHO05D006579 1.9e-66 256.5 203 63.1
FAN12G1488 Fragaria x ananassa HOM05D004931 ORTHO05D006579 1.6e-65 253.4 209 61.7
MBI07_g35974_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 7.4e-63 244.6 226 57.1
Sabra01G0046800 Salix brachista HOM05D004931 ORTHO05D006579 1.4e-61 240.4 222 56.3
Actinidia31350 Actinidia chinensis HOM05D004931 ORTHO05D006579 3.6e-57 225.7 205 57.6
PSO832G0491 Papaver somniferum HOM05D004931 ORTHO05D006579 1.8e-56 223.4 220 54.1
Cre10.g441500 Chlamydomonas reinhardtii HOM05D004931 ORTHO05D006579 2.2e-51 206.5 230 47.0
Dinv02758 Davidia involucrata HOM05D004931 ORTHO05D006579 1.9e-50 203.4 145 65.5
A07p11470 Brassica napus HOM05D004931 ORTHO05D006579 9.4e-50 201.1 154 64.9
BraA07t28936Z Brassica rapa HOM05D004931 ORTHO05D006579 9.4e-50 201.1 154 64.9
Sed0016914 Sechium edule HOM05D004931 ORTHO05D006579 1.6e-49 200.3 136 69.1
Duzib132G0410 Durio zibethinus HOM05D004931 ORTHO05D006579 3.1e-45 186.0 185 53.0
CBR_g45420 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-43 180.3 149 63.8
Eucgr.B03557 Eucalyptus grandis HOM05D004931 ORTHO05D006579 3.6e-41 172.6 118 68.6
PRCOL_00001027 Prasinoderma coloniale HOM05D004931 ORTHO05D006579 1.8e-40 170.2 220 43.6
Haze_27431 Corylus avellana HOM05D004931 ORTHO05D006579 2.6e-39 166.4 215 43.3
Lalb_Chr18g0060061 Lupinus albus HOM05D004931 ORTHO05D006579 3.4e-39 166.0 131 62.6
PGSC0003DMG402006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 2.2e-38 163.3 121 67.8
PSO170G5257 Papaver somniferum HOM05D004650 ORTHO05D005715 1.2e-28 131.0 119 56.3
RcHm_v2.0_Chr7g0205601 Rosa chinensis HOM05D004931 ORTHO05D006579 1.6e-28 130.6 88 69.3
Sc17g0004710 Simmondsia chinensis HOM05D004931 ORTHO05D006579 1.9e-26 123.6 92 66.3
PGSC0003DMG401006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 1.1e-21 107.8 69 69.6
ECA238G1930 Erigeron canadensis HOM05D000406 ORTHO05D006918 4.0e-16 89.4 55 72.7
Os02g0521600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D037234 1.2e-15 87.8 222 27.9
Os04g0652600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D299584 1.2e-15 87.8 205 29.3
Zm00001eb242070 Zea mays HOM05D004931 ORTHO05D037234 3.7e-14 82.8 235 28.5
Zm00001eb406040 Zea mays HOM05D004931 ORTHO05D006579 3.2e-13 79.7 175 28.6
BolC2t10441H Brassica oleracea HOM05D004931 ORTHO05D027277 3.5e-12 76.3 76 56.6
Solyc03g059395.1 Solanum lycopersicum HOM05D004931 ORTHO05D006579 6.6e-11 72.0 54 55.6
C01p27720 Brassica napus HOM05D004931 ORTHO05D027277 1.9e-10 70.5 74 51.4
Zm00001eb406050 Zea mays HOM05D004931 ORTHO05D444756 2.5e-10 70.1 196 26.5
Lalb_Chr18g0060051 Lupinus albus HOM05D004931 ORTHO05D006579 4.0e-08 62.8 47 57.4
BcaC03g16580 Brassica carinata HOM05D004931 ORTHO05D027277 8.9e-08 61.6 60 55.0
Cre06.g253755 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D145199 1.3e-06 57.8 123 30.1
Cre06.g253459 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D146359 4.9e-06 55.8 123 29.3
Cre06.g253566 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D138934 4.9e-06 55.8 123 29.3
Cre06.g253851 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D145445 4.9e-06 55.8 123 29.3
Sopen03g014100 Solanum pennellii HOM05D004931 ORTHO05D006579 6.4e-06 55.5 39 56.4
TPR.G382 Trifolium pratense HOM05D004931 ORTHO05D006579 8.4e-06 55.1 26 84.6


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