Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_228.3670 Anthoceros agrestis HOM05D003156 ORTHO05D003508 0.0e+00 3202.9 1679 100.0
AagrBONN_evm.TU.Sc2ySwM_351.7 Anthoceros agrestis HOM05D003156 ORTHO05D003508 0.0e+00 1247.6 1021 71.0
AagrBONN_evm.TU.Sc2ySwM_185.8 Anthoceros agrestis HOM05D003156 ORTHO05D003508 0.0e+00 1238.8 1024 70.6
AagrBONN_evm.TU.Sc2ySwM_203.1 Anthoceros agrestis HOM05D003156 ORTHO05D003508 0.0e+00 1080.5 697 85.4
AagrBONN_evm.TU.Sc2ySwM_351.4 Anthoceros agrestis HOM05D003156 ORTHO05D003508 7.0e-243 845.5 541 85.6
AagrBONN_evm.TU.Sc2ySwM_186.2 Anthoceros agrestis HOM05D003156 ORTHO05D003508 1.1e-219 768.5 808 59.3
Pp3c4_7100 Physcomitrium patens HOM05D003156 ORTHO05D003508 4.6e-186 656.8 1885 34.4
AagrBONN_evm.TU.Sc2ySwM_25.2 Anthoceros agrestis HOM05D003156 ORTHO05D003508 2.9e-172 610.9 385 86.2
AagrBONN_evm.TU.Sc2ySwM_186.4 Anthoceros agrestis HOM05D003156 ORTHO05D003508 2.3e-169 601.3 601 61.7
Pp3c12_21290 Physcomitrium patens HOM05D003156 ORTHO05D003508 1.2e-165 589.0 1853 33.2
Pp3c4_6990 Physcomitrium patens HOM05D003156 ORTHO05D003508 6.1e-162 576.6 1911 32.3
Mapoly0001s0480 Marchantia polymorpha HOM05D003156 ORTHO05D003508 4.4e-120 437.6 1473 31.8
SEGI_14984 Sequoiadendron giganteum HOM05D003156 ORTHO05D003508 2.9e-111 408.3 1496 30.5
Pp3c11_8780 Physcomitrium patens HOM05D003156 ORTHO05D003508 2.8e-106 391.7 914 35.7
Pp3c11_8790 Physcomitrium patens HOM05D003156 ORTHO05D003508 2.8e-106 391.7 914 35.7
Pp3c12_21500 Physcomitrium patens HOM05D003156 ORTHO05D003508 4.4e-104 384.4 1166 33.4
Pp3c7_16800 Physcomitrium patens HOM05D003156 ORTHO05D003508 4.0e-97 361.3 1510 30.5
AagrBONN_evm.TU.Sc2ySwM_351.5 Anthoceros agrestis HOM05D003156 ORTHO05D003508 8.4e-87 327.0 437 50.1
MBI14_g09786_MAGBIO Magnolia biondii HOM05D003156 ORTHO05D003508 2.1e-53 216.1 935 28.2
TAR081G0003 Trochodendron aralioides HOM05D003156 ORTHO05D003508 2.7e-53 215.7 960 28.1
Lj1C919T3 Lonicera japonica HOM05D003156 ORTHO05D003508 4.6e-53 214.9 973 28.1
Glyma.10G212600 Glycine max HOM05D003156 ORTHO05D003508 6.7e-52 211.1 1003 28.4
SEGI_14396 Sequoiadendron giganteum HOM05D003156 ORTHO05D003508 2.5e-51 209.1 1262 25.0
Thecc.10G070400 Theobroma cacao HOM05D003156 ORTHO05D003508 3.7e-50 205.3 1025 27.2
Dinv31359 Davidia involucrata HOM05D003156 ORTHO05D003508 1.1e-49 203.8 971 27.0
AUR62027953 Chenopodium quinoa HOM05D003156 ORTHO05D003508 5.3e-49 201.4 1004 27.9
Cpa.g.sc53.53 Carica papaya HOM05D003156 ORTHO05D003508 4.5e-48 198.4 1001 26.9
Sabra08G0028800 Salix brachista HOM05D003156 ORTHO05D003508 4.5e-48 198.4 956 26.6
MELO3C002897.2 Cucumis melo HOM05D003156 ORTHO05D003508 7.7e-48 197.6 504 32.1
Sed0022604 Sechium edule HOM05D003156 ORTHO05D003508 1.0e-47 197.2 524 32.6
GSVIVG01016309001 Vitis vinifera HOM05D003156 ORTHO05D003508 1.0e-47 197.2 974 26.2
CBR_g49682 Chara braunii HOM05D000785 ORTHO05D000231 1.3e-47 196.8 262 46.6
Glyma.20G178500 Glycine max HOM05D003156 ORTHO05D003508 1.7e-47 196.4 998 27.3
CSS0000465 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 2.2e-47 196.1 1230 26.1
Cfa001606 Carpinus fangiana HOM05D003156 ORTHO05D003508 2.9e-47 195.7 940 28.0
EL10Ac2g03591 Beta vulgaris HOM05D003156 ORTHO05D003508 8.5e-47 194.1 1057 26.3
AUR62020759 Chenopodium quinoa HOM05D003156 ORTHO05D003508 1.1e-46 193.7 975 27.3
RcHm_v2.0_Chr1g0363841 Rosa chinensis HOM05D003156 ORTHO05D003508 1.4e-46 193.4 1022 26.5
QL08p056552 Quercus lobata HOM05D003156 ORTHO05D003508 1.9e-46 193.0 1066 26.6
Sc20g0001950 Simmondsia chinensis HOM05D003156 ORTHO05D003508 4.2e-46 191.8 1259 25.6
Duzib106G1668 Durio zibethinus HOM05D003156 ORTHO05D003508 7.2e-46 191.0 581 30.6
ClCG05G020880 Citrullus lanatus HOM05D003156 ORTHO05D003508 9.4e-46 190.7 1068 27.0
Gohir.D10G215300 Gossypium hirsutum HOM05D003156 ORTHO05D003508 9.4e-46 190.7 525 31.6
MD12G1111500 Malus domestica HOM05D003156 ORTHO05D003508 1.2e-45 190.3 865 26.8
Atru.chr12.725 Acer truncatum HOM05D003156 ORTHO05D003508 1.6e-45 189.9 950 28.0
CiPaw.02G175200 Carya illinoinensis HOM05D003156 ORTHO05D003508 1.6e-45 189.9 967 27.4
Gorai.011G240800 Gossypium raimondii HOM05D003156 ORTHO05D003508 1.6e-45 189.9 1230 25.0
CiPaw.01G274600 Carya illinoinensis HOM05D003156 ORTHO05D003508 2.7e-45 189.1 1104 26.5
Cc02_g11460 Coffea canephora HOM05D003156 ORTHO05D003508 2.7e-45 189.1 1179 25.5
CsaV3_5G036430 Cucumis sativus L. HOM05D003156 ORTHO05D003508 3.6e-45 188.7 1123 25.7
Hund19345 Selenicereus undatus HOM05D003156 ORTHO05D003508 3.6e-45 188.7 1082 27.1
CANSAT56G0537 Cannabis sativa HOM05D003156 ORTHO05D003508 4.7e-45 188.3 931 27.0
Potri.008G041900 Populus trichocarpa HOM05D003156 ORTHO05D003508 4.7e-45 188.3 959 26.4
DCAR_006452 Daucus carota HOM05D003156 ORTHO05D003508 6.1e-45 188.0 975 26.1
Nn2g10723 Nelumbo nucifera HOM05D003156 ORTHO05D003508 6.1e-45 188.0 940 27.6
Potri.010G220000 Populus trichocarpa HOM05D003156 ORTHO05D003508 6.1e-45 188.0 950 26.9
Aqoxy2G01803 Aquilegia oxysepala HOM05D003156 ORTHO05D003508 1.0e-44 187.2 961 26.3
COL.COLO4_23712 Corchorus olitorius HOM05D003156 ORTHO05D003508 1.4e-44 186.8 1197 26.1
FAN03G0982 Fragaria x ananassa HOM05D003156 ORTHO05D003508 1.4e-44 186.8 989 26.2
FAN06G3106 Fragaria x ananassa HOM05D003156 ORTHO05D003508 1.4e-44 186.8 1021 26.4
CsaV3_5G025770 Cucumis sativus L. HOM05D003156 ORTHO05D003508 2.3e-44 186.0 1108 25.9
Prupe.2G215600 Prunus persica HOM05D003156 ORTHO05D003508 3.0e-44 185.7 1025 26.5
Manes.10G044400 Manihot esculenta HOM05D003156 ORTHO05D003508 3.9e-44 185.3 956 26.7
TAR369G0111 Trochodendron aralioides HOM05D003156 ORTHO05D003508 3.9e-44 185.3 493 32.5
Nn2g13035 Nelumbo nucifera HOM05D003156 ORTHO05D003508 1.1e-43 183.7 985 27.0
vmacro04882 Vaccinium macrocarpon HOM05D003156 ORTHO05D003508 1.1e-43 183.7 947 26.9
CAN.G131.2 Capsicum annuum HOM05D003156 ORTHO05D003508 2.0e-43 183.0 1047 25.2
Duzib114G0389 Durio zibethinus HOM05D003156 ORTHO05D003508 2.0e-43 183.0 1126 26.4
Nitab4.5_0000233g0120 Nicotiana tabacum HOM05D003156 ORTHO05D003508 2.0e-43 183.0 978 25.3
Sed0025548 Sechium edule HOM05D003156 ORTHO05D003508 3.3e-43 182.2 604 29.5
Ca_10580_v3 Cicer arietinum L. HOM05D003156 ORTHO05D003508 5.7e-43 181.4 1139 25.7
Gohir.D13G023500 Gossypium hirsutum HOM05D003156 ORTHO05D003508 7.4e-43 181.0 962 26.5
Medtr1g095570 Medicago truncatula HOM05D003156 ORTHO05D003508 7.4e-43 181.0 943 27.1
Phvul.007G093100 Phaseolus vulgaris HOM05D003156 ORTHO05D003508 9.7e-43 180.6 1187 25.3
Ah.11g043470 Amaranthus hybridus HOM05D003156 ORTHO05D003508 2.2e-42 179.5 1190 26.0
Gohir.A13G024600 Gossypium hirsutum HOM05D003156 ORTHO05D003508 2.8e-42 179.1 1198 25.0
MD01G1110800 Malus domestica HOM05D003156 ORTHO05D003508 2.8e-42 179.1 992 25.3
ATR0314G007 Amborella trichopoda HOM05D003156 ORTHO05D003508 3.7e-42 178.7 366 35.5
Lalb_Chr01g0010131 Lupinus albus HOM05D003156 ORTHO05D003508 4.8e-42 178.3 977 26.7
THA.LOC104819148 Tarenaya hassleriana HOM05D003156 ORTHO05D003508 4.8e-42 178.3 949 27.2
TPR.G1826 Trifolium pratense HOM05D003156 ORTHO05D003508 4.8e-42 178.3 863 27.8
MELO3C012441.2 Cucumis melo HOM05D003156 ORTHO05D003508 6.3e-42 177.9 1136 25.4
VMungo0720G1431 Vigna mungo HOM05D003156 ORTHO05D003508 6.3e-42 177.9 1117 24.8
Gohir.A10G207200 Gossypium hirsutum HOM05D003156 ORTHO05D003508 8.2e-42 177.6 1351 24.3
SalBow3G0597 Salvia bowleyana HOM05D003156 ORTHO05D003508 8.2e-42 177.6 522 29.9
Rhsim09G0153200 Rhododendron simsii HOM05D003156 ORTHO05D003508 1.1e-41 177.2 956 25.5
Gorai.013G026300 Gossypium raimondii HOM05D003156 ORTHO05D003508 1.8e-41 176.4 958 26.0
Nitab4.5_0004081g0040 Nicotiana tabacum HOM05D003156 ORTHO05D003508 2.4e-41 176.0 956 23.7
PSO339G2433 Papaver somniferum HOM05D003156 ORTHO05D003508 2.4e-41 176.0 657 30.0
Dinv11794 Davidia involucrata HOM05D003156 ORTHO05D003508 3.1e-41 175.6 1231 24.9
Lj5g0023323 Lotus japonicus HOM05D003156 ORTHO05D003508 9.1e-41 174.1 1163 26.3
Lalb_Chr06g0162221 Lupinus albus HOM05D003156 ORTHO05D003508 9.1e-41 174.1 1025 26.2
CDE09G0617 Ceratophyllum demersum HOM05D003156 ORTHO05D003508 1.2e-40 173.7 509 30.6
CSS0022533 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 1.5e-40 173.3 1289 24.0
Sopen04g018550 Solanum pennellii HOM05D003156 ORTHO05D003508 1.5e-40 173.3 1088 24.9
TAR633G1985 Trochodendron aralioides HOM05D003156 ORTHO05D003508 2.0e-40 172.9 1264 25.0
Oeu033854.1 Olea europaea HOM05D003156 ORTHO05D003508 1.0e-39 170.6 435 32.4
MSTRG.8149 Avicennia marina HOM05D003156 ORTHO05D003508 1.7e-39 169.9 953 27.5
Ciclev10030482m.g Citrus clementina HOM05D003156 ORTHO05D003508 1.7e-39 169.9 1177 26.4
Lalb_Chr02g0141981 Lupinus albus HOM05D003156 ORTHO05D003508 1.7e-39 169.9 893 26.4
CDE02G1002 Ceratophyllum demersum HOM05D003156 ORTHO05D003508 2.2e-39 169.5 688 30.1
Zm00001eb265240 Zea mays HOM05D003156 ORTHO05D003508 2.2e-39 169.5 1005 26.0
Psat6g185160 Pisum sativum HOM05D003156 ORTHO05D003508 2.9e-39 169.1 942 25.9
TWI15G0830 Tripterygium wilfordii HOM05D003156 ORTHO05D003508 2.9e-39 169.1 1117 25.0
Actinidia38262 Actinidia chinensis HOM05D003156 ORTHO05D003508 3.8e-39 168.7 875 27.1
FAN01G2311 Fragaria x ananassa HOM05D003156 ORTHO05D003508 1.5e-38 166.8 1143 25.5
Sed0017215 Sechium edule HOM05D003156 ORTHO05D003508 1.9e-38 166.4 987 25.1
Manes.07G103600 Manihot esculenta HOM05D003156 ORTHO05D003508 2.5e-38 166.0 1166 24.9
FvH4_7g19850 Fragaria vesca HOM05D003156 ORTHO05D003508 3.2e-38 165.6 1261 24.6
Sabra10G0169800 Salix brachista HOM05D003156 ORTHO05D003508 3.2e-38 165.6 1199 23.8
Lsat_1_v5_gn_2_113740 Lactuca sativa HOM05D003156 ORTHO05D003508 4.2e-38 165.2 941 27.0
PSO384G3096 Papaver somniferum HOM05D003156 ORTHO05D003508 4.2e-38 165.2 687 28.7
PGR142G2490 Punica granatum HOM05D003156 ORTHO05D003508 4.2e-38 165.2 1124 26.0
FAN10G3307 Fragaria x ananassa HOM05D003156 ORTHO05D003508 5.5e-38 164.9 1282 24.6
Carub.0005s1861 Capsella rubella HOM05D003156 ORTHO05D003508 1.2e-37 163.7 892 27.0
Lalb_Chr03g0035991 Lupinus albus HOM05D003156 ORTHO05D003508 1.6e-37 163.3 966 26.2
Oeu007399.2 Olea europaea HOM05D003156 ORTHO05D003508 1.6e-37 163.3 1008 25.7
unitig_0.g194 Utricularia gibba HOM05D003156 ORTHO05D003508 3.6e-37 162.2 919 26.0
SalBow4G2724 Salvia bowleyana HOM05D003156 ORTHO05D003508 6.1e-37 161.4 959 26.0
AL5G32840 Arabidopsis lyrata HOM05D003156 ORTHO05D003508 8.0e-37 161.0 930 26.5
Medtr6g033350 Medicago truncatula HOM05D003156 ORTHO05D003508 1.4e-36 160.2 526 29.7
MSTRG.370 Avicennia marina HOM05D003156 ORTHO05D003508 1.8e-36 159.8 973 25.8
Ca_04674_v3 Cicer arietinum L. HOM05D003156 ORTHO05D003508 1.8e-36 159.8 1131 25.6
Migut.F01767 Erythranthe guttata HOM05D003156 ORTHO05D003508 2.3e-36 159.5 993 25.5
HanXRQChr14g0457261 Helianthus annuus HOM05D003156 ORTHO05D003508 3.0e-36 159.1 950 25.1
Actinidia38263 Actinidia chinensis HOM05D003156 ORTHO05D003508 3.9e-36 158.7 416 30.5
arahy.Tifrunner.gnm1.ann1.PUBH8J Arachis hypogaea HOM05D003156 ORTHO05D003508 3.9e-36 158.7 1017 25.1
Oeu043931.1 Olea europaea HOM05D003156 ORTHO05D003508 3.9e-36 158.7 582 27.3
TPR.G36666 Trifolium pratense HOM05D003156 ORTHO05D003508 5.2e-36 158.3 1052 24.3
Oeu042736.1 Olea europaea HOM05D003156 ORTHO05D003508 1.5e-35 156.8 535 29.3
CARHR162010 Cardamine hirsuta HOM05D003156 ORTHO05D003508 2.0e-35 156.4 1256 25.6
Actinidia03046 Actinidia chinensis HOM05D003156 ORTHO05D003508 2.6e-35 156.0 360 33.6
AT3G52250 Arabidopsis thaliana HOM05D003156 ORTHO05D003508 3.3e-35 155.6 1251 24.9
CSS0028910 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 4.4e-35 155.2 1035 24.8
Aa31csc81G40 Aethionema arabicum HOM05D003156 ORTHO05D003508 5.7e-35 154.8 500 29.0
ECA238G0789 Erigeron canadensis HOM05D003156 ORTHO05D003508 7.4e-35 154.5 939 25.7
Aa31LG10G7350 Aethionema arabicum HOM05D003156 ORTHO05D003508 1.7e-34 153.3 489 29.7
arahy.Tifrunner.gnm1.ann1.0MFP8V Arachis hypogaea HOM05D003156 ORTHO05D003508 2.2e-34 152.9 1018 25.1
Lsat_1_v5_gn_2_113780 Lactuca sativa HOM05D003156 ORTHO05D003508 2.2e-34 152.9 1011 24.9
Lalb_Chr19g0129611 Lupinus albus HOM05D003156 ORTHO05D003508 3.7e-34 152.1 955 25.5
Peaxi162Scf00108g00911 Petunia axillaris HOM05D003156 ORTHO05D003508 3.7e-34 152.1 980 24.7
A03p48760 Brassica napus HOM05D003156 ORTHO05D003508 6.3e-34 151.4 477 30.2
HanXRQChr11g0323301 Helianthus annuus HOM05D003156 ORTHO05D003508 6.3e-34 151.4 494 29.4
BraA03t13976Z Brassica rapa HOM05D003156 ORTHO05D003508 1.4e-33 150.2 453 30.0
C07p46850 Brassica napus HOM05D003156 ORTHO05D003508 1.8e-33 149.8 477 30.2
C08p27500 Brassica napus HOM05D003156 ORTHO05D003508 1.8e-33 149.8 440 31.4
BolC7t45201H Brassica oleracea HOM05D003156 ORTHO05D003508 1.8e-33 149.8 477 30.2
A09p45310 Brassica napus HOM05D003156 ORTHO05D003508 2.4e-33 149.4 440 31.8
BolC8t50370H Brassica oleracea HOM05D003156 ORTHO05D003508 5.3e-33 148.3 950 25.8
Lj2g0025480 Lotus japonicus HOM05D003156 ORTHO05D003508 5.3e-33 148.3 1217 24.1
Oeu014390.1 Olea europaea HOM05D003156 ORTHO05D003508 1.6e-32 146.7 498 29.7
BraA09t39994Z Brassica rapa HOM05D003156 ORTHO05D003508 4.5e-32 145.2 916 25.9
Zm00001eb355010 Zea mays HOM05D003156 ORTHO05D003508 5.9e-32 144.8 1101 24.6
Ah.10g032860 Amaranthus hybridus HOM05D003156 ORTHO05D003508 1.0e-31 144.1 486 29.2
Sp5g10010 Schrenkiella parvula HOM05D003156 ORTHO05D003508 2.2e-31 142.9 1204 24.9
Gohir.D05G297300 Gossypium hirsutum HOM05D003156 ORTHO05D003508 3.8e-31 142.1 510 28.0
Thhalv10010054m.g Eutrema salsugineum HOM05D003156 ORTHO05D003508 8.5e-31 141.0 1248 25.5
Haze_16918 Corylus avellana HOM05D003156 ORTHO05D003508 1.1e-30 140.6 314 35.4
Solyc04g049120.4 Solanum lycopersicum HOM05D003156 ORTHO05D003508 3.2e-30 139.0 1082 23.2
Sed0017725 Sechium edule HOM05D003156 ORTHO05D003508 5.5e-30 138.3 1192 23.3
PGR044G0836 Punica granatum HOM05D003156 ORTHO05D003508 4.7e-29 135.2 572 28.5
SGA_v2.0_scaffold341G49358 Striga asiatica HOM05D003156 ORTHO05D003508 4.7e-29 135.2 999 24.0
Eucgr.G02815 Eucalyptus grandis HOM05D003156 ORTHO05D003508 6.1e-29 134.8 1208 24.4
THA.LOC104806084 Tarenaya hassleriana HOM05D003156 ORTHO05D003508 1.5e-27 130.2 1238 24.8
unitig_60.g25704 Utricularia gibba HOM05D003156 ORTHO05D003508 1.5e-27 130.2 325 31.1
Gohir.A05G297400 Gossypium hirsutum HOM05D003156 ORTHO05D003508 1.8e-25 123.2 541 26.2
SGA_v2.0_scaffold51G18682 Striga asiatica HOM05D003156 ORTHO05D003508 1.8e-25 123.2 1026 23.4
Psat7g135120 Pisum sativum HOM05D003156 ORTHO05D003508 2.0e-24 119.8 113 54.0
Glyma.13G071701 Glycine max HOM05D003156 ORTHO05D003508 3.2e-22 112.5 139 43.2
SMO361G0003 Selaginella moellendorffii HOM05D003156 ORTHO05D003508 6.1e-21 108.2 83 61.4
SMO361G0517 Selaginella moellendorffii HOM05D003156 ORTHO05D003508 6.1e-21 108.2 83 61.4
Actinidia08031 Actinidia chinensis HOM05D003156 ORTHO05D003508 8.0e-21 107.8 318 29.2
MCO13G549 Micromonas commoda HOM05D003156 ORTHO05D003508 8.8e-20 104.4 268 31.3
DCAR_019123 Daucus carota HOM05D003156 ORTHO05D003508 1.5e-19 103.6 909 22.4
Actinidia03045 Actinidia chinensis HOM05D003156 ORTHO05D003508 3.4e-19 102.4 139 41.0
Actinidia08029 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.1e-17 97.4 108 47.2
SMO361G0472 Selaginella moellendorffii HOM05D003156 ORTHO05D374601 4.5e-16 92.0 384 29.2
AagrBONN_evm.TU.Sc2ySwM_117.3090 Anthoceros agrestis HOM05D003156 ORTHO05D003508 3.3e-14 85.9 133 44.4
VMungo0464G1901 Vigna mungo HOM05D003156 ORTHO05D003508 1.0e-12 80.9 1059 23.0
Cre06.g264400 Chlamydomonas reinhardtii HOM05D003156 ORTHO05D003508 3.7e-10 72.4 866 20.8
Psat1g100160 Pisum sativum HOM05D003156 ORTHO05D003508 1.1e-09 70.9 1044 21.6
VMungo0464G1633 Vigna mungo HOM05D003156 ORTHO05D003508 1.9e-06 60.1 147 36.7
HPP92_006757 Vanilla planifolia HOM05D003156 ORTHO05D003508 2.5e-06 59.7 655 23.4


User provided reference genes

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