Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 2.8e-194 681.8 349 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 1.7e-114 416.8 413 56.2
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 2.1e-85 320.1 396 45.2
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.4e-84 317.4 413 45.0
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 5.2e-84 315.5 385 47.8
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 1.5e-83 313.9 411 45.3
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 4.4e-83 312.4 411 46.0
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 5.8e-83 312.0 409 45.5
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 9.9e-83 311.2 412 45.4
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 1.3e-82 310.8 411 46.2
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 1.7e-82 310.5 411 45.5
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 1.7e-82 310.5 411 44.8
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 1.7e-82 310.5 409 45.5
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 2.2e-82 310.1 410 45.4
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 2.2e-82 310.1 411 46.0
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 3.8e-82 309.3 411 45.0
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 8.4e-82 308.1 411 46.2
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 1.1e-81 307.8 411 45.0
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 1.1e-81 307.8 411 44.5
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 1.4e-81 307.4 411 46.2
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 1.4e-81 307.4 411 45.5
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 2.4e-81 306.6 411 45.7
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 2.4e-81 306.6 411 45.7
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 5.4e-81 305.4 413 44.1
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 1.2e-80 304.3 271 56.1
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 3.5e-80 302.8 411 45.3
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 3.5e-80 302.8 411 43.6
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 3.5e-80 302.8 411 44.8
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 4.6e-80 302.4 411 45.3
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 4.6e-80 302.4 411 45.0
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.0e-79 301.2 420 44.0
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 1.0e-79 301.2 412 44.7
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.3e-79 300.8 420 44.0
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 1.3e-79 300.8 411 43.3
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 1.7e-79 300.4 411 43.6
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.3e-79 300.1 387 46.5
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 2.3e-79 300.1 407 44.7
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 2.3e-79 300.1 411 43.1
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 3.0e-79 299.7 319 51.4
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 6.6e-79 298.5 410 44.1
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 6.6e-79 298.5 411 44.0
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 8.7e-79 298.1 411 42.8
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 8.7e-79 298.1 411 44.0
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.1e-78 297.7 411 43.8
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 1.5e-78 297.4 411 43.1
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 1.5e-78 297.4 410 44.1
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.5e-78 297.4 410 44.1
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 1.9e-78 297.0 407 44.5
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 1.9e-78 297.0 411 42.8
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.5e-78 296.6 410 43.9
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.5e-78 296.6 410 44.1
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 2.5e-78 296.6 396 44.4
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 2.5e-78 296.6 411 43.1
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 3.3e-78 296.2 319 48.9
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 4.3e-78 295.8 413 44.3
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 9.6e-78 294.7 319 50.8
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 1.3e-77 294.3 412 43.0
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 1.3e-77 294.3 411 43.3
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 1.6e-77 293.9 411 43.3
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.6e-77 293.9 413 43.1
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 2.1e-77 293.5 409 43.3
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 2.1e-77 293.5 409 43.3
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.1e-77 293.5 416 43.5
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 2.8e-77 293.1 411 43.3
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 2.8e-77 293.1 319 50.2
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 3.6e-77 292.7 319 49.8
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 3.6e-77 292.7 411 44.8
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 4.8e-77 292.4 411 42.8
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 8.1e-77 291.6 418 41.4
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 8.1e-77 291.6 314 50.0
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 8.1e-77 291.6 270 55.6
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 8.1e-77 291.6 270 55.6
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 2.4e-76 290.0 411 43.6
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 2.4e-76 290.0 411 43.1
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 2.4e-76 290.0 322 46.9
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 4.0e-76 289.3 319 49.5
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 5.3e-76 288.9 314 49.4
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 6.9e-76 288.5 319 48.3
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.2e-75 287.7 316 50.0
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 5.8e-75 285.4 411 42.8
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 5.8e-75 285.4 411 41.8
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 1.3e-74 284.3 411 42.6
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 4.9e-74 282.3 416 42.1
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 7.9e-72 275.0 320 46.9
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 1.0e-71 274.6 447 39.8
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 5.1e-71 272.3 411 41.8
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 2.5e-70 270.0 416 41.6
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 3.7e-69 266.2 275 52.4
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 3.1e-68 263.1 412 42.7
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 4.0e-68 262.7 357 43.4
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 6.9e-68 261.9 413 41.4
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 6.9e-68 261.9 312 46.5
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 3.2e-65 253.1 411 40.6
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 4.6e-64 249.2 363 42.1
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 8.7e-63 245.0 414 40.1
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 5.6e-62 242.3 319 42.6
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 4.0e-60 236.1 398 38.4
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 6.9e-60 235.3 398 38.4
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 1.9e-57 227.3 336 41.4
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 8.2e-53 211.8 411 37.7
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 8.2e-53 211.8 229 49.3
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 1.4e-52 211.1 278 43.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 1.0e-50 204.9 326 40.8
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.7e-48 196.8 432 35.2
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 6.7e-47 192.2 411 35.8
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 1.0e-42 178.3 252 43.7
TPR.G11462 Trifolium pratense HOM05D001598 ORTHO05D007192 7.4e-38 162.2 202 45.0
TPR.G24627 Trifolium pratense HOM05D001598 ORTHO05D007192 7.7e-27 125.6 143 46.2
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.2e-18 97.4 156 41.0
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-12 77.4 95 41.1
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.9e-10 70.5 85 50.6
SMO307G0084 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 5.0e-10 69.7 62 51.6
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.1e-09 68.6 120 40.0
Gohir.D02G147550 Gossypium hirsutum HOM05D006828 ORTHO05D008312 1.5e-09 68.2 50 66.0
Gorai.013G167300 Gossypium raimondii HOM05D006828 ORTHO05D008312 1.5e-09 68.2 50 66.0
Gohir.D05G085901 Gossypium hirsutum HOM05D001598 ORTHO05D008312 1.8e-07 61.2 50 60.0
CBR_g53784 Chara braunii HOM05D001598 ORTHO05D007192 6.8e-07 59.3 128 36.7


User provided reference genes

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