Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc911G10 Aethionema arabicum HOM05D005776 ORTHO05D007333 3.9e-59 231.1 105 100.0
Aa31LG6G13780 Aethionema arabicum HOM05D005776 ORTHO05D007333 1.4e-16 89.7 92 55.4
Carub.0007s0339 Capsella rubella HOM05D005776 ORTHO05D007333 9.1e-16 87.0 92 53.3
AL7G14000 Arabidopsis lyrata HOM05D005776 ORTHO05D007333 2.0e-15 85.9 92 52.2
A01p02000 Brassica napus HOM05D005776 ORTHO05D007333 2.0e-15 85.9 92 52.2
C01p02180 Brassica napus HOM05D005776 ORTHO05D007333 2.0e-15 85.9 92 52.2
BolC1t00210H Brassica oleracea HOM05D005776 ORTHO05D007333 2.0e-15 85.9 92 52.2
BraA01t00188Z Brassica rapa HOM05D005776 ORTHO05D007333 2.0e-15 85.9 92 52.2
Sp7g34590 Schrenkiella parvula HOM05D005776 ORTHO05D007333 2.0e-15 85.9 92 52.2
CARHR245310 Cardamine hirsuta HOM05D005776 ORTHO05D007333 2.7e-15 85.5 75 62.7
Eucgr.H01941 Eucalyptus grandis HOM05D005776 ORTHO05D007333 3.5e-15 85.1 92 52.2
Peaxi162Scf00235g00723 Petunia axillaris HOM05D005776 ORTHO05D007333 4.5e-15 84.7 92 51.1
Thhalv10026051m.g Eutrema salsugineum HOM05D005776 ORTHO05D007333 5.9e-15 84.3 92 52.2
AT4G37200 Arabidopsis thaliana HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 51.1
ClCG01G016400 Citrullus lanatus HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 51.1
Cc07_g19620 Coffea canephora HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 51.1
MELO3C007510.2 Cucumis melo HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 51.1
CsaV3_6G042720 Cucumis sativus L. HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 51.1
Hma1.2p1_0739F.1_g211300 Hydrangea macrophylla HOM05D005776 ORTHO05D007333 1.0e-14 83.6 91 51.6
PGR102G0103 Punica granatum HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 50.0
Thecc.02G289200 Theobroma cacao HOM05D005776 ORTHO05D007333 1.0e-14 83.6 92 50.0
Cfa004232 Carpinus fangiana HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
Cfa017515 Carpinus fangiana HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
Haze_15167 Corylus avellana HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
Migut.K00840 Erythranthe guttata HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
Glyma.01G182500 Glycine max HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
SalBow1G0426 Salvia bowleyana HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
SalBow1G6751 Salvia bowleyana HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
unitig_578.g16073 Utricularia gibba HOM05D005776 ORTHO05D007333 1.3e-14 83.2 92 50.0
MSTRG.3404 Avicennia marina HOM05D005776 ORTHO05D007333 1.7e-14 82.8 92 48.9
EL10Ac2g03922 Beta vulgaris HOM05D005776 ORTHO05D007333 1.7e-14 82.8 92 50.0
Glyma.11G060800 Glycine max HOM05D005776 ORTHO05D007333 1.7e-14 82.8 92 50.0
Medtr5g018580 Medicago truncatula HOM05D005776 ORTHO05D007333 1.7e-14 82.8 92 50.0
Ah.10g034500 Amaranthus hybridus HOM05D000575 ORTHO05D004448 2.2e-14 82.4 92 50.0
Sed0000268 Sechium edule HOM05D005776 ORTHO05D007333 2.2e-14 82.4 92 50.0
CSS0016523 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
CSS0036517 Camellia sinensis var. sinensis HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
Gohir.A03G118800 Gossypium hirsutum HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
Gohir.D02G141600 Gossypium hirsutum HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
Gorai.005G159700 Gossypium raimondii HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
Potri.007G034400 Populus trichocarpa HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
QL06p044240 Quercus lobata HOM05D005776 ORTHO05D007333 2.9e-14 82.0 94 52.1
Rhsim10G0126200 Rhododendron simsii HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
Sc15g0005670 Simmondsia chinensis HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 50.0
SGA_v2.0_scaffold10G05128 Striga asiatica HOM05D005776 ORTHO05D007333 2.9e-14 82.0 92 48.9
arahy.Tifrunner.gnm1.ann1.41BUH4 Arachis hypogaea HOM05D005776 ORTHO05D007333 3.8e-14 81.6 92 48.9
arahy.Tifrunner.gnm1.ann1.TE9NQ7 Arachis hypogaea HOM05D005776 ORTHO05D007333 3.8e-14 81.6 92 48.9
Ca_24808_v3 Cicer arietinum L. HOM05D005776 ORTHO05D007333 3.8e-14 81.6 92 48.9
Manes.12G094700 Manihot esculenta HOM05D005776 ORTHO05D007333 3.8e-14 81.6 92 48.9
Phvul.002G023500 Phaseolus vulgaris HOM05D005776 ORTHO05D007333 3.8e-14 81.6 92 48.9
VMungo1215G2372 Vigna mungo HOM05D005776 ORTHO05D007333 3.8e-14 81.6 92 48.9
Cpa.g.sc15.62 Carica papaya HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 47.8
AUR62009176 Chenopodium quinoa HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 50.0
AUR62022050 Chenopodium quinoa HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 50.0
Ciclev10026303m.g Citrus clementina HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 48.9
Lj4A136T80 Lonicera japonica HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 48.9
Lalb_Chr09g0333671 Lupinus albus HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 50.0
PSO541G0480 Papaver somniferum HOM05D001143 ORTHO05D007333 5.0e-14 81.3 92 48.9
PSO675G1056 Papaver somniferum HOM05D005776 ORTHO05D007333 5.0e-14 81.3 92 48.9
Actinidia12087 Actinidia chinensis HOM05D005776 ORTHO05D007333 6.5e-14 80.9 92 48.9
COL.COLO4_07276 Corchorus olitorius HOM05D005776 ORTHO05D007333 6.5e-14 80.9 92 48.9
Duzib251G0151 Durio zibethinus HOM05D005776 ORTHO05D007333 6.5e-14 80.9 92 48.9
Psat2g163800 Pisum sativum HOM05D005776 ORTHO05D007333 6.5e-14 80.9 92 48.9
Hund05302 Selenicereus undatus HOM05D005776 ORTHO05D007333 6.5e-14 80.9 92 50.0
MD15G1273400 Malus domestica HOM05D005776 ORTHO05D007333 8.5e-14 80.5 92 48.9
Nn6g32162 Nelumbo nucifera HOM05D005776 ORTHO05D007333 8.5e-14 80.5 92 47.8
Oeu032924.1 Olea europaea HOM05D005776 ORTHO05D007333 8.5e-14 80.5 92 47.8
vmacro11025 Vaccinium macrocarpon HOM05D005776 ORTHO05D007333 8.5e-14 80.5 92 48.9
GSVIVG01003777001 Vitis vinifera HOM05D005776 ORTHO05D007333 8.5e-14 80.5 92 50.0
COL.COLO4_13087 Corchorus olitorius HOM05D005776 ORTHO05D007333 1.1e-13 80.1 92 48.9
Lj2g0005971 Lotus japonicus HOM05D005776 ORTHO05D007333 1.5e-13 79.7 92 48.9
Os03g0767500 Oryza sativa ssp. japonica HOM05D005776 ORTHO05D007333 1.5e-13 79.7 92 47.8
THA.LOC104804218 Tarenaya hassleriana HOM05D005776 ORTHO05D007333 1.5e-13 79.7 95 48.4
TPR.G29855 Trifolium pratense HOM05D005776 ORTHO05D007333 1.5e-13 79.7 92 48.9
TAR628G1436 Trochodendron aralioides HOM05D005776 ORTHO05D007333 1.5e-13 79.7 92 48.9
CiPaw.01G029000 Carya illinoinensis HOM05D005776 ORTHO05D007333 1.9e-13 79.3 92 48.9
MBI16_g29183_MAGBIO Magnolia biondii HOM05D005776 ORTHO05D007333 1.9e-13 79.3 92 48.9
HPP92_012224 Vanilla planifolia HOM05D005776 ORTHO05D007333 1.9e-13 79.3 92 46.7
Aqoxy6G00958 Aquilegia oxysepala HOM05D005776 ORTHO05D007333 2.5e-13 79.0 92 48.9
CANSAT25G0990 Cannabis sativa HOM05D005776 ORTHO05D007333 2.5e-13 79.0 92 46.7
Gohir.A03G118600 Gossypium hirsutum HOM05D005776 ORTHO05D007333 2.5e-13 79.0 75 57.3
Prupe.7G145200 Prunus persica HOM05D005776 ORTHO05D007333 2.5e-13 79.0 94 50.0
CDE02G0814 Ceratophyllum demersum HOM05D005776 ORTHO05D007333 3.2e-13 78.6 92 47.8
MD02G1158600 Malus domestica HOM05D005776 ORTHO05D007333 3.2e-13 78.6 94 50.0
Nitab4.5_0000984g0010 Nicotiana tabacum HOM05D005776 ORTHO05D007333 3.2e-13 78.6 92 47.8
Zm00001eb213990 Zea mays HOM05D005776 ORTHO05D007333 3.2e-13 78.6 92 47.8
ATR0733G088 Amborella trichopoda HOM05D005776 ORTHO05D007333 4.2e-13 78.2 92 47.8
ECA246G4011 Erigeron canadensis HOM05D005776 ORTHO05D007333 4.2e-13 78.2 92 46.7
HanXRQChr12g0378471 Helianthus annuus HOM05D005776 ORTHO05D007333 4.2e-13 78.2 92 46.7
TWI09G1011 Tripterygium wilfordii HOM05D005776 ORTHO05D007333 4.2e-13 78.2 92 45.7
Sabra07G0030000 Salix brachista HOM05D005776 ORTHO05D007333 5.5e-13 77.8 92 47.8
FvH4_1g14520 Fragaria vesca HOM05D005776 ORTHO05D007333 9.5e-13 77.0 94 50.0
FAN19G1930 Fragaria x ananassa HOM05D005776 ORTHO05D007333 9.5e-13 77.0 94 50.0
FAN23G2656 Fragaria x ananassa HOM05D005776 ORTHO05D007333 9.5e-13 77.0 94 50.0
FAN26G3400 Fragaria x ananassa HOM05D005776 ORTHO05D007333 9.5e-13 77.0 94 50.0
FAN28G0587 Fragaria x ananassa HOM05D005776 ORTHO05D007333 9.5e-13 77.0 94 50.0
Nitab4.5_0002826g0010 Nicotiana tabacum HOM05D005776 ORTHO05D007333 9.5e-13 77.0 92 46.7
RcHm_v2.0_Chr2g0103261 Rosa chinensis HOM05D005776 ORTHO05D007333 9.5e-13 77.0 94 50.0
Atru.chr3.470 Acer truncatum HOM05D005776 ORTHO05D007333 1.2e-12 76.6 79 53.2
Lsat_1_v5_gn_3_94020 Lactuca sativa HOM05D005776 ORTHO05D007333 1.2e-12 76.6 92 45.7
PGSC0003DMG400022206 Solanum tuberosum HOM05D005776 ORTHO05D007333 1.2e-12 76.6 92 45.7
Sopen07g033140 Solanum pennellii HOM05D005776 ORTHO05D007333 1.6e-12 76.3 92 45.7
CAN.G337.59 Capsicum annuum HOM05D005776 ORTHO05D007333 2.1e-12 75.9 92 45.7
MD17G1248400 Malus domestica HOM05D005776 ORTHO05D007333 2.7e-12 75.5 75 54.7
CDE01G0348 Ceratophyllum demersum HOM05D001852 ORTHO05D001989 8.0e-12 73.9 75 53.3
Solyc07g064940.3 Solanum lycopersicum HOM05D005776 ORTHO05D007333 1.0e-11 73.6 75 52.0
AagrBONN_evm.TU.Sc2ySwM_344.5430 Anthoceros agrestis HOM05D005776 ORTHO05D007333 1.4e-11 73.2 75 52.0
Mapoly0011s0067 Marchantia polymorpha HOM05D005776 ORTHO05D007333 5.2e-11 71.2 75 53.3
TAR625G0250 Trochodendron aralioides HOM05D005776 ORTHO05D007333 8.8e-11 70.5 90 45.6
Duzib268G1673 Durio zibethinus HOM05D005776 ORTHO05D007333 1.2e-10 70.1 92 42.4
SMO329G0044 Selaginella moellendorffii HOM05D005776 ORTHO05D007333 2.6e-10 68.9 75 48.0
BolC1t00269H Brassica oleracea HOM05D005776 ORTHO05D007333 4.4e-10 68.2 68 55.9
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 3.7e-09 65.1 74 48.6
BcaNung00756 Brassica carinata HOM05D005776 ORTHO05D007333 7.0e-08 60.8 64 53.1
C01p02790 Brassica napus HOM05D005776 ORTHO05D007333 7.0e-08 60.8 64 53.1
Gorai.005G159300 Gossypium raimondii HOM05D005776 ORTHO05D007333 2.0e-07 59.3 80 41.2


User provided reference genes

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