Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc77G110 Aethionema arabicum HOM05D000067 ORTHO05D000097 3.6e-42 174.5 86 100.0
Aa31LG6G2640 Aethionema arabicum HOM05D000067 ORTHO05D000097 3.5e-21 104.8 86 62.8
Sp7g14110 Schrenkiella parvula HOM05D000067 ORTHO05D000097 3.5e-21 104.8 84 58.3
BcaC06g32961 Brassica carinata HOM05D000067 ORTHO05D000097 2.9e-20 101.7 84 56.0
BcaC06g30647 Brassica carinata HOM05D000067 ORTHO05D000097 5.0e-20 100.9 84 56.0
BcaC09g51329 Brassica carinata HOM05D000067 ORTHO05D000097 1.5e-19 99.4 84 54.8
A03p52360 Brassica napus HOM05D000067 ORTHO05D000097 1.5e-19 99.4 84 54.8
C01p14200 Brassica napus HOM05D000067 ORTHO05D000097 1.5e-19 99.4 84 54.8
BolC1t01384H Brassica oleracea HOM05D000067 ORTHO05D000097 1.5e-19 99.4 84 54.8
BolC7t45580H Brassica oleracea HOM05D000067 ORTHO05D000097 1.9e-19 99.0 84 53.6
BraA03t14311Z Brassica rapa HOM05D000067 ORTHO05D000097 1.9e-19 99.0 84 54.8
Carub.0007s2093 Capsella rubella HOM05D000067 ORTHO05D000097 3.2e-19 98.2 84 54.8
BcaNung03715 Brassica carinata HOM05D000067 ORTHO05D000097 9.4e-19 96.7 84 54.8
A01p11950 Brassica napus HOM05D000067 ORTHO05D000097 9.4e-19 96.7 84 53.6
BraA01t01137Z Brassica rapa HOM05D000067 ORTHO05D000097 9.4e-19 96.7 84 53.6
C07p50810 Brassica napus HOM05D000067 ORTHO05D000097 1.2e-18 96.3 84 52.4
Aa31LG7G11160 Aethionema arabicum HOM05D000067 ORTHO05D000097 3.0e-17 91.7 85 52.9
Aa31LG6G2620 Aethionema arabicum HOM05D000067 ORTHO05D000097 1.5e-16 89.4 84 53.6
Thhalv10028539m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 1.5e-16 89.4 84 50.0
AT4G20200 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 2.6e-16 88.6 84 50.0
CARHR227020 Cardamine hirsuta HOM05D000067 ORTHO05D000097 2.6e-16 88.6 84 51.2
BolC7t45578H Brassica oleracea HOM05D000067 ORTHO05D000097 2.2e-15 85.5 83 51.8
A03p52340 Brassica napus HOM05D000067 ORTHO05D000097 3.7e-15 84.7 83 50.6
Carub.0006s2747 Capsella rubella HOM05D000067 ORTHO05D000097 4.8e-15 84.3 84 48.8
BcaB03g11636 Brassica carinata HOM05D000067 ORTHO05D000097 6.3e-15 84.0 84 47.6
BcaNung03493 Brassica carinata HOM05D000067 ORTHO05D000097 6.3e-15 84.0 83 51.8
C03p82520 Brassica napus HOM05D000067 ORTHO05D000097 6.3e-15 84.0 83 50.6
BolC3t20502H Brassica oleracea HOM05D000067 ORTHO05D000097 6.3e-15 84.0 83 50.6
A08p14460 Brassica napus HOM05D000067 ORTHO05D000097 8.3e-15 83.6 83 49.4
BraA08t33435Z Brassica rapa HOM05D000067 ORTHO05D000097 8.3e-15 83.6 83 49.4
BcaNung03495 Brassica carinata HOM05D000067 ORTHO05D000097 1.1e-14 83.2 83 50.6
C07p50770 Brassica napus HOM05D000067 ORTHO05D000097 1.1e-14 83.2 83 50.6
CARHR227060 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.8e-14 82.4 84 46.4
BcaB03g11635 Brassica carinata HOM05D000067 ORTHO05D000097 2.4e-14 82.0 83 47.0
Carub.0007s2094 Capsella rubella HOM05D000067 ORTHO05D000097 5.4e-14 80.9 84 48.8
CARHR178270 Cardamine hirsuta HOM05D000067 ORTHO05D000097 9.1e-14 80.1 84 42.9
THA.LOC104817080 Tarenaya hassleriana HOM05D000067 ORTHO05D000097 9.1e-14 80.1 84 40.5
AT4G20230 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 1.6e-13 79.3 84 46.4
Carub.0007s2933 Capsella rubella HOM05D000067 ORTHO05D000097 5.9e-13 77.4 86 45.3
CARHR227040 Cardamine hirsuta HOM05D000067 ORTHO05D000097 5.9e-13 77.4 85 45.9
AL8G15010 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 1.0e-12 76.6 84 41.7
Carub.0008s0370 Capsella rubella HOM05D000067 ORTHO05D000097 1.3e-12 76.3 84 39.3
AT1G48800 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 2.3e-12 75.5 82 45.1
AT5G44630 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 2.3e-12 75.5 84 41.7
BcaB04g18357 Brassica carinata HOM05D000067 ORTHO05D000097 2.3e-12 75.5 80 48.8
BcaC01g00662 Brassica carinata HOM05D000866 ORTHO05D000673 2.3e-12 75.5 84 45.2
CARHR218840 Cardamine hirsuta HOM05D000067 ORTHO05D000097 2.3e-12 75.5 84 41.7
Aa31sc99G10 Aethionema arabicum HOM05D000067 ORTHO05D000097 2.9e-12 75.1 84 42.9
AL9U10470 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 2.9e-12 75.1 84 41.7
BcaB03g11634 Brassica carinata HOM05D000067 ORTHO05D000097 2.9e-12 75.1 83 43.4
Thhalv10027515m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 2.9e-12 75.1 84 47.6
AL8G15000 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 3.8e-12 74.7 84 41.7
CARHR038820 Cardamine hirsuta HOM05D000067 ORTHO05D000097 5.0e-12 74.3 82 42.7
BcaB07g30510 Brassica carinata HOM05D000067 ORTHO05D000097 8.6e-12 73.6 84 39.3
BcaB07g30512 Brassica carinata HOM05D000067 ORTHO05D000097 8.6e-12 73.6 84 39.3
BcaB07g30514 Brassica carinata HOM05D000067 ORTHO05D000097 8.6e-12 73.6 84 39.3
Carub.0008s0365 Capsella rubella HOM05D000067 ORTHO05D000097 8.6e-12 73.6 84 38.1
AL1G55520 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 1.1e-11 73.2 82 42.7
CARHR178290 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.1e-11 73.2 84 39.3
Aa31LG10G11660 Aethionema arabicum HOM05D000067 ORTHO05D000097 1.5e-11 72.8 82 46.3
AL4G13120 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 1.5e-11 72.8 84 41.7
Carub.0001s3795 Capsella rubella HOM05D000067 ORTHO05D000097 1.5e-11 72.8 82 41.5
Carub.0008s0366 Capsella rubella HOM05D000067 ORTHO05D000097 1.5e-11 72.8 84 39.3
AT3G29190 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 1.9e-11 72.4 84 44.0
BraA07t30247Z Brassica rapa HOM05D000067 ORTHO05D000097 2.5e-11 72.0 83 43.4
Carub.0001s3796 Capsella rubella HOM05D000067 ORTHO05D000097 2.5e-11 72.0 82 40.2
AL1G55550 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 3.3e-11 71.6 80 42.5
BcaB07g30887 Brassica carinata HOM05D000067 ORTHO05D000097 3.3e-11 71.6 83 43.4
A08p14870 Brassica napus HOM05D000067 ORTHO05D000097 3.3e-11 71.6 78 51.3
BraA08t33470Z Brassica rapa HOM05D000067 ORTHO05D000097 3.3e-11 71.6 78 51.3
BraA09t37522Z Brassica rapa HOM05D000067 ORTHO05D000097 3.3e-11 71.6 82 42.7
Carub.0008s0368 Capsella rubella HOM05D000067 ORTHO05D000097 5.5e-11 70.9 84 38.1
CARHR227030 Cardamine hirsuta HOM05D000067 ORTHO05D000097 5.5e-11 70.9 84 40.5
Aa31LG6G9830 Aethionema arabicum HOM05D000067 ORTHO05D000097 7.2e-11 70.5 82 42.7
AT4G13300 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 7.2e-11 70.5 86 40.7
Sp7g10790 Schrenkiella parvula HOM05D000067 ORTHO05D000097 7.2e-11 70.5 86 44.2
BcaC08g45202 Brassica carinata HOM05D000067 ORTHO05D000097 9.5e-11 70.1 83 42.2
C06p28280 Brassica napus HOM05D000067 ORTHO05D000097 9.5e-11 70.1 83 43.4
BolC6t37998H Brassica oleracea HOM05D000067 ORTHO05D000097 9.5e-11 70.1 83 43.4
CARHR220910 Cardamine hirsuta HOM05D000067 ORTHO05D000097 9.5e-11 70.1 84 40.5
Thhalv10001108m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 9.5e-11 70.1 84 39.3
BcaB02g07718 Brassica carinata HOM05D000067 ORTHO05D000097 1.2e-10 69.7 85 41.2
A04p12240 Brassica napus HOM05D000067 ORTHO05D000097 1.2e-10 69.7 84 39.3
C09p57990 Brassica napus HOM05D000067 ORTHO05D000097 1.2e-10 69.7 84 38.1
C09p58010 Brassica napus HOM05D000067 ORTHO05D000097 1.2e-10 69.7 84 38.1
BraA04t16887Z Brassica rapa HOM05D000067 ORTHO05D000097 1.2e-10 69.7 84 39.3
BraA10t44169Z Brassica rapa HOM05D000067 ORTHO05D000097 1.2e-10 69.7 84 38.1
BcaC04g21763 Brassica carinata HOM05D000067 ORTHO05D000097 2.1e-10 68.9 83 42.2
Carub.0004s0244 Capsella rubella HOM05D000067 ORTHO05D000097 2.1e-10 68.9 85 40.0
BcaC04g18675 Brassica carinata HOM05D000067 ORTHO05D000097 2.8e-10 68.6 84 38.1
A02p28480 Brassica napus HOM05D000067 ORTHO05D000097 2.8e-10 68.6 84 35.7
C04p23020 Brassica napus HOM05D000067 ORTHO05D000097 2.8e-10 68.6 79 43.0
C09p27850 Brassica napus HOM05D000067 ORTHO05D000097 2.8e-10 68.6 83 41.0
BolC9t58667H Brassica oleracea HOM05D000067 ORTHO05D000097 2.8e-10 68.6 84 38.1
BraA02t07884Z Brassica rapa HOM05D000067 ORTHO05D000097 2.8e-10 68.6 84 35.7
A09p19050 Brassica napus HOM05D005293 ORTHO05D006764 3.6e-10 68.2 82 41.5
Thhalv10001228m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 3.6e-10 68.2 84 39.3
THA.LOC104811351 Tarenaya hassleriana HOM05D000067 ORTHO05D000097 4.7e-10 67.8 88 40.9
THA.LOC104822556 Tarenaya hassleriana HOM05D000067 ORTHO05D000097 4.7e-10 67.8 88 40.9
AT1G48820 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 6.1e-10 67.4 82 39.0
A09p21750 Brassica napus HOM05D000067 ORTHO05D000097 8.0e-10 67.0 83 41.0
BolC9t55649H Brassica oleracea HOM05D000067 ORTHO05D000097 8.0e-10 67.0 83 41.0
BraA09t37777Z Brassica rapa HOM05D000067 ORTHO05D000097 8.0e-10 67.0 83 41.0
AT4G20210 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 1.0e-09 66.6 84 40.5
Aa31sc99G120 Aethionema arabicum HOM05D000067 ORTHO05D000097 1.4e-09 66.2 82 40.2
AT4G15870 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 1.8e-09 65.9 73 39.7
Aa31LG7G11680 Aethionema arabicum HOM05D000067 ORTHO05D000097 5.2e-09 64.3 84 33.3
Sp2g09440 Schrenkiella parvula HOM05D000067 ORTHO05D000097 5.2e-09 64.3 80 37.5
Aa31LG7G11660 Aethionema arabicum HOM05D000067 ORTHO05D000097 1.2e-08 63.2 84 33.3
THA.LOC104822557 Tarenaya hassleriana HOM05D000067 ORTHO05D000097 1.2e-08 63.2 82 42.7
Aa31sc134G20 Aethionema arabicum HOM05D000067 ORTHO05D000097 1.5e-08 62.8 84 32.1
C05p35370 Brassica napus HOM05D000067 ORTHO05D000097 4.4e-08 61.2 83 38.6
Carub.0002s1277 Capsella rubella HOM05D000067 ORTHO05D000097 4.4e-08 61.2 84 35.7
CARHR038780 Cardamine hirsuta HOM05D000067 ORTHO05D000097 4.4e-08 61.2 82 34.1
Aa31LG11G9670 Aethionema arabicum HOM05D000067 ORTHO05D000097 5.7e-08 60.8 82 39.0
CARHR220940 Cardamine hirsuta HOM05D000067 ORTHO05D013969 7.5e-08 60.5 84 33.3
BcaC03g16681 Brassica carinata HOM05D000067 ORTHO05D000097 9.8e-08 60.1 77 33.8
CARHR038790 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.3e-07 59.7 82 34.1
CARHR131900 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.3e-07 59.7 84 36.9
Potri.019G016700 Populus trichocarpa HOM05D000067 ORTHO05D000097 1.3e-07 59.7 83 34.9
AT3G29110 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 1.7e-07 59.3 84 39.3
Carub.0001s1953 Capsella rubella HOM05D000067 ORTHO05D000097 1.7e-07 59.3 84 33.3
A10p15020 Brassica napus HOM05D000067 ORTHO05D000097 2.2e-07 58.9 84 39.3
BraA10t43579Z Brassica rapa HOM05D000067 ORTHO05D000097 2.2e-07 58.9 84 39.3
Potri.019G016500 Populus trichocarpa HOM05D000067 ORTHO05D000097 2.2e-07 58.9 83 34.9
Potri.019G016118 Populus trichocarpa HOM05D000067 ORTHO05D000097 2.8e-07 58.5 81 35.8
Sabra19G0031100 Salix brachista HOM05D000067 ORTHO05D000097 2.8e-07 58.5 84 34.5
BcaC01g00624 Brassica carinata HOM05D000067 ORTHO05D000097 3.7e-07 58.2 85 38.8
CARHR057360 Cardamine hirsuta HOM05D000067 ORTHO05D000097 3.7e-07 58.2 84 33.3
Potri.019G016400 Populus trichocarpa HOM05D000067 ORTHO05D000097 4.9e-07 57.8 81 35.8
Potri.019G023004 Populus trichocarpa HOM05D000067 ORTHO05D000097 6.3e-07 57.4 82 34.1
Carub.0003s1423 Capsella rubella HOM05D000067 ORTHO05D000097 8.3e-07 57.0 84 32.1
Thhalv10012075m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 8.3e-07 57.0 74 41.9
Nitab4.5_0005383g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 8.3e-07 57.0 81 37.0
Sp3g12800 Schrenkiella parvula HOM05D000067 ORTHO05D000097 1.1e-06 56.6 81 39.5
CARHR089270 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.4e-06 56.2 79 41.8
Potri.019G020367 Populus trichocarpa HOM05D000067 ORTHO05D000097 1.8e-06 55.8 83 34.9
Thhalv10005627m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 2.4e-06 55.5 85 38.8
Hma1.2p1_1111F.1_g258290 Hydrangea macrophylla HOM05D000067 ORTHO05D000097 2.4e-06 55.5 80 41.2
Sabra19G0028100 Salix brachista HOM05D000067 ORTHO05D000097 2.4e-06 55.5 82 32.9
AT5G48110 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 3.1e-06 55.1 84 28.6
AT1G31950 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 4.1e-06 54.7 81 35.8
AT1G70080 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 4.1e-06 54.7 84 35.7
AT3G14520 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 4.1e-06 54.7 81 34.6
BcaC04g23447 Brassica carinata HOM05D000067 ORTHO05D000097 4.1e-06 54.7 85 36.5
C09p08240 Brassica napus HOM05D000067 ORTHO05D000097 4.1e-06 54.7 85 36.5
BolC9t53734H Brassica oleracea HOM05D000067 ORTHO05D000097 4.1e-06 54.7 85 36.5
Hma1.2p1_0090F.1_g045520 Hydrangea macrophylla HOM05D000067 ORTHO05D000097 4.1e-06 54.7 77 41.6
Carub.0001s3324 Capsella rubella HOM05D000067 ORTHO05D000097 5.4e-06 54.3 84 34.5
Oeu053379.1 Olea europaea HOM05D000067 ORTHO05D000097 7.0e-06 53.9 83 32.5
A01p39200 Brassica napus HOM05D000067 ORTHO05D000097 9.2e-06 53.5 73 39.7
BraA01t03964Z Brassica rapa HOM05D000067 ORTHO05D000097 9.2e-06 53.5 73 39.7
CARHR089260 Cardamine hirsuta HOM05D000067 ORTHO05D000097 9.2e-06 53.5 79 39.2


User provided reference genes

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