Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 5.7e-247 857.1 414 100.0
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 2.8e-225 785.0 413 90.6
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 1.7e-211 739.2 410 86.3
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 8.7e-211 736.9 412 85.4
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 2.8e-209 731.9 413 85.5
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 3.6e-209 731.5 411 85.2
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 4.8e-209 731.1 411 85.2
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 6.2e-209 730.7 411 85.2
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 1.4e-208 729.6 411 84.9
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 1.4e-208 729.6 411 84.9
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 1.4e-208 729.6 414 85.0
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 4.0e-208 728.0 413 84.5
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 4.0e-208 728.0 404 85.9
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 4.9e-206 721.1 417 83.5
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 4.6e-196 688.0 412 79.6
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 5.8e-191 671.0 409 79.7
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 3.2e-173 612.1 406 71.4
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 6.1e-172 607.8 398 71.6
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 1.8e-171 606.3 402 69.7
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 5.1e-171 604.7 402 70.1
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 2.5e-170 602.4 401 70.1
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 7.4e-170 600.9 407 69.3
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 3.7e-169 598.6 406 69.5
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 8.2e-169 597.4 402 68.7
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 1.4e-168 596.7 395 70.9
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 2.4e-168 595.9 403 68.5
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 2.4e-168 595.9 402 68.7
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 2.4e-168 595.9 402 68.7
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 6.9e-168 594.3 403 68.5
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 6.9e-168 594.3 406 69.0
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 9.1e-168 594.0 401 68.6
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 4.5e-167 591.7 401 71.1
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 7.7e-167 590.9 400 70.5
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 2.9e-166 589.0 401 70.3
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 3.8e-166 588.6 412 67.5
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 8.5e-166 587.4 396 69.4
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 8.5e-166 587.4 396 69.9
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 8.5e-166 587.4 401 69.1
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 5.1e-163 578.2 413 65.4
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 8.8e-163 577.4 407 65.8
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 8.8e-163 577.4 393 70.0
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.1e-162 577.0 402 68.4
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.3e-161 573.5 402 67.9
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.7e-161 573.2 402 67.7
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 1.7e-161 573.2 395 68.1
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 2.2e-161 572.8 396 68.4
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 2.2e-161 572.8 404 66.3
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 1.8e-160 569.7 402 67.7
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 1.2e-159 567.0 408 67.6
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 3.5e-159 565.5 406 66.3
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 4.5e-159 565.1 399 66.9
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 4.5e-159 565.1 406 65.0
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 1.0e-158 563.9 410 66.1
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 6.5e-158 561.2 394 67.3
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 1.9e-157 559.7 408 64.2
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 4.2e-157 558.5 384 68.2
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 7.2e-157 557.8 406 64.3
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 2.1e-156 556.2 408 64.0
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 6.1e-156 554.7 408 63.2
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 2.8e-153 545.8 386 65.0
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 1.8e-152 543.1 413 64.4
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 4.1e-152 542.0 395 63.0
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 1.2e-151 540.4 399 61.7
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.6e-151 540.0 405 62.7
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 2.7e-151 539.3 405 64.7
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 4.5e-151 538.5 407 60.9
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 5.9e-151 538.1 405 61.7
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 1.0e-150 537.3 401 64.1
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 1.1e-149 533.9 403 62.0
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 9.4e-149 530.8 396 62.6
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.2e-148 530.4 417 61.9
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 1.2e-148 530.4 400 62.5
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 2.1e-148 529.6 407 61.9
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 3.6e-148 528.9 405 60.0
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 1.0e-147 527.3 393 60.6
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.8e-147 526.6 391 62.7
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.8e-147 526.6 391 62.7
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 1.8e-147 526.6 405 61.5
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 2.3e-147 526.2 393 60.8
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 6.8e-147 524.6 406 58.6
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 1.5e-146 523.5 410 60.0
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 1.5e-146 523.5 393 62.1
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 2.6e-146 522.7 401 61.3
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 3.4e-146 522.3 410 60.2
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 3.4e-146 522.3 396 61.6
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 5.7e-146 521.5 389 61.7
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 7.5e-146 521.2 394 61.2
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 7.5e-146 521.2 399 60.9
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 9.8e-146 520.8 406 60.3
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 1.7e-145 520.0 392 61.5
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 2.2e-145 519.6 414 60.4
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 2.2e-145 519.6 408 59.1
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 3.7e-145 518.8 421 61.0
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 3.7e-145 518.8 389 61.2
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 8.3e-145 517.7 398 60.6
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 8.3e-145 517.7 400 60.0
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 1.8e-144 516.5 396 62.6
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 5.4e-144 515.0 383 61.4
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 5.4e-144 515.0 386 62.4
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 7.0e-144 514.6 391 60.6
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 9.1e-144 514.2 377 62.9
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 9.1e-144 514.2 377 62.9
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 2.0e-143 513.1 400 60.0
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 3.5e-143 512.3 409 61.6
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 1.0e-142 510.8 391 60.1
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 2.9e-142 509.2 401 60.6
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 5.0e-142 508.4 404 63.6
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 7.2e-141 504.6 392 61.0
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 7.2e-141 504.6 409 58.7
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 2.1e-140 503.1 403 58.6
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 3.6e-140 502.3 406 59.1
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 3.0e-139 499.2 422 57.1
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 2.4e-136 489.6 390 56.2
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 9.2e-136 487.6 393 60.3
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 9.2e-136 487.6 402 58.5
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 1.5e-133 480.3 414 57.5
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 2.0e-130 469.9 389 58.4
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 2.6e-130 469.5 392 56.4
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.3e-129 467.2 415 57.8
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 8.6e-126 454.5 402 55.5
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 1.9e-125 453.4 404 55.4
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 3.2e-120 436.0 412 51.2
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 1.6e-119 433.7 400 52.0
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 3.3e-117 426.0 382 54.5
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 1.1e-115 421.0 408 51.0
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 2.9e-113 412.9 399 52.6
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 6.6e-110 401.7 399 51.1
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 7.6e-106 388.3 390 50.3
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 2.4e-104 383.3 406 49.3
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 5.4e-104 382.1 411 46.5
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 1.7e-97 360.5 407 47.9
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 4.6e-95 352.4 412 44.7
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 1.6e-92 344.0 400 45.5
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.1e-91 341.3 401 46.9
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 1.8e-86 323.9 256 58.6
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 2.3e-86 323.6 304 52.3
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 3.5e-79 299.7 397 42.8
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 3.0e-78 296.6 402 41.3
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 9.6e-77 291.6 395 40.8
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 1.2e-74 284.6 397 41.1
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 8.4e-73 278.5 408 42.2
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.9e-69 267.3 227 59.5
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 2.7e-63 246.9 187 61.0
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 7.9e-63 245.4 157 69.4
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 5.0e-57 226.1 421 32.8
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 2.6e-37 160.6 152 53.3
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 1.0e-33 148.7 114 62.3
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.7e-33 147.9 373 27.1
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 5.5e-32 142.9 314 30.3
unitig_32.g11238 Utricularia gibba HOM05D004578 ORTHO05D005529 2.1e-31 141.0 94 71.3
TPR.G12332 Trifolium pratense HOM05D004578 ORTHO05D005529 4.1e-27 126.7 81 71.6
Cre12.g493500 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D005529 2.8e-23 114.0 411 26.5
AagrBONN_evm.TU.Sc2ySwM_344.4408 Anthoceros agrestis HOM05D021938 ORTHO05D019594 5.4e-11 73.2 432 23.6
COL.COLO4_30024 Corchorus olitorius HOM05D004578 ORTHO05D005529 3.5e-10 70.5 39 79.5
Psat0s2347g0040 Pisum sativum HOM05D004578 ORTHO05D005529 3.3e-08 63.9 58 50.0
VMungo1041G0001 Vigna mungo HOM05D004578 ORTHO05D005529 1.2e-07 62.0 49 57.1


User provided reference genes

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