Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 0.0e+00 1297.0 647 100.0
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 3.6e-256 888.3 685 69.1
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 9.0e-255 883.6 686 69.2
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.8e-248 862.1 686 68.2
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 1.5e-246 856.3 685 66.1
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 2.2e-245 852.4 686 67.2
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 3.8e-245 851.7 685 67.2
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 3.2e-244 848.6 685 66.4
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.1e-243 845.9 685 66.3
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 7.9e-243 844.0 686 66.3
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.3e-242 843.2 686 66.5
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.2e-238 830.1 708 65.0
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.1e-231 807.0 611 69.7
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 7.9e-219 764.2 723 59.5
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 6.3e-184 648.3 723 50.6
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.4e-183 647.1 723 50.9
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 2.9e-181 639.4 712 50.8
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.8e-178 630.2 721 49.5
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.4e-177 625.5 718 49.3
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 9.8e-177 624.4 728 48.1
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.4e-175 620.5 727 49.1
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.6e-174 617.1 722 49.6
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 3.6e-171 605.9 664 48.3
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.6e-171 605.9 716 47.8
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 3.6e-171 605.9 714 48.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 3.1e-170 602.8 651 48.8
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 6.8e-170 601.7 698 49.1
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.2e-169 600.9 710 46.9
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 5.8e-169 598.6 715 48.4
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.9e-168 596.3 709 47.8
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.4e-167 593.2 707 46.0
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 9.2e-167 591.3 707 45.7
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.8e-166 588.2 707 45.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 5.0e-165 585.5 661 49.0
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.9e-164 583.6 721 46.6
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.3e-164 582.4 707 45.5
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.1e-162 577.8 721 46.2
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.4e-162 577.4 727 45.9
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 2.3e-162 576.6 725 46.1
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.1e-162 576.2 647 50.4
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 5.2e-162 575.5 660 47.7
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 1.5e-161 573.9 791 43.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.7e-160 570.5 721 45.8
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 8.3e-160 568.2 654 49.4
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 8.3e-160 568.2 728 45.9
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.9e-159 567.0 687 46.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 2.4e-159 566.6 662 47.1
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 7.0e-159 565.1 668 47.3
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.2e-158 564.3 655 49.0
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 2.1e-158 563.5 684 48.1
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.3e-157 560.8 658 47.1
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 3.9e-157 559.3 631 49.3
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 8.6e-157 558.1 740 45.5
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.1e-156 557.8 732 45.1
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.9e-156 557.0 649 46.7
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 5.6e-156 555.4 728 45.1
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.2e-155 554.3 632 49.8
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 5.2e-154 548.9 652 48.2
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.5e-153 547.4 684 45.6
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 2.0e-153 547.0 656 46.8
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 5.8e-153 545.4 729 43.6
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 8.3e-152 541.6 728 43.7
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 4.1e-151 539.3 670 45.4
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 4.1e-151 539.3 671 44.7
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.7e-150 536.6 614 48.5
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.7e-150 536.6 659 45.7
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.9e-148 530.4 723 44.3
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 4.3e-148 529.3 700 46.3
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 4.7e-147 525.8 671 45.6
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.9e-144 516.5 738 42.0
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.9e-143 513.8 630 46.7
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.4e-143 512.3 662 44.1
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 6.0e-142 508.8 668 45.5
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 3.0e-141 506.5 551 49.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.2e-137 494.6 659 44.2
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.3e-135 485.0 624 43.8
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 4.6e-134 482.6 489 55.2
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.3e-133 481.1 642 44.9
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 7.3e-132 475.3 687 40.6
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 4.8e-131 472.6 655 43.1
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 8.1e-131 471.9 504 51.6
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 4.5e-129 466.1 656 41.3
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.9e-125 453.0 567 47.1
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.1e-119 434.9 558 46.1
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.7e-118 430.3 538 45.7
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 8.2e-115 418.7 679 40.4
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.6e-107 394.4 496 47.0
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 2.5e-103 380.6 358 54.5
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 6.3e-99 365.9 657 35.3
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.2e-97 361.7 401 51.1
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.5e-97 361.3 536 41.8
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 5.0e-96 356.3 480 42.3
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 5.5e-95 352.8 325 57.2
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.7e-83 314.7 653 33.7
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.8e-82 311.2 357 48.2
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.5e-79 301.6 350 49.4
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 9.8e-76 288.9 305 51.5
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.7e-75 287.0 321 47.4
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 2.7e-73 280.8 707 30.7
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.5e-71 275.0 563 33.0
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 9.4e-71 272.3 298 51.0
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 8.0e-70 269.2 374 40.9
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 8.8e-69 265.8 372 42.2
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.5e-68 265.0 614 31.8
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 3.3e-63 247.3 323 41.5
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.8e-54 217.6 303 44.9
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 8.3e-51 206.1 547 30.9
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 9.2e-50 202.6 147 64.6
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 3.3e-47 194.1 161 59.6
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 7.3e-47 193.0 300 42.0
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.9e-39 168.3 327 34.9
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.6e-38 165.2 132 59.1
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.9e-34 151.8 120 58.3
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.1e-33 148.3 256 35.5
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 8.9e-29 132.9 248 37.5
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 3.5e-25 120.9 199 36.7
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 4.6e-25 120.6 131 46.6
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 3.3e-23 114.4 123 52.0
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.7e-17 94.7 77 61.0
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.9e-15 88.6 78 51.3
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.5e-12 79.0 140 33.6
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 5.5e-10 70.5 185 31.9
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 5.5e-10 70.5 91 45.1
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.5e-09 67.8 50 60.0
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.0e-08 64.7 188 29.8
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.3e-06 59.3 44 59.1


User provided reference genes

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