Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31sc16G50 Aethionema arabicum HOM05D000567 ORTHO05D000767 6.2e-29 130.2 69 100.0
Aa31LG1G3430 Aethionema arabicum HOM05D000567 ORTHO05D000767 1.4e-25 119.0 69 91.3
Aa31LG6G610 Aethionema arabicum HOM05D000567 ORTHO05D000767 8.1e-21 103.2 68 80.9
Carub.0007s2348 Capsella rubella HOM05D000567 ORTHO05D000767 7.3e-14 80.1 69 62.3
AT4G17880 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 2.8e-13 78.2 69 62.3
BcaNung00047 Brassica carinata HOM05D000567 ORTHO05D000767 4.8e-13 77.4 73 61.6
AL7G36650 Arabidopsis lyrata HOM05D000567 ORTHO05D000767 6.2e-13 77.0 69 62.3
A01p09930 Brassica napus HOM05D000567 ORTHO05D000767 6.2e-13 77.0 71 62.0
BraA01t00937Z Brassica rapa HOM05D000567 ORTHO05D000767 1.1e-12 76.3 71 62.0
BcaC09g51591 Brassica carinata HOM05D000567 ORTHO05D000767 5.3e-12 73.9 71 60.6
BolC1t01134H Brassica oleracea HOM05D000567 ORTHO05D000767 5.3e-12 73.9 71 60.6
Aa31LG9G6130 Aethionema arabicum HOM05D000567 ORTHO05D000767 6.9e-12 73.6 71 62.0
C01p11710 Brassica napus HOM05D000567 ORTHO05D000767 6.9e-12 73.6 71 60.6
Thhalv10000808m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 6.9e-12 73.6 71 60.6
Sp2g11570 Schrenkiella parvula HOM05D000567 ORTHO05D000767 1.2e-11 72.8 72 62.5
SpUn0036_0040 Schrenkiella parvula HOM05D000567 ORTHO05D000767 1.2e-11 72.8 72 62.5
CARHR174740 Cardamine hirsuta HOM05D000567 ORTHO05D000767 1.5e-11 72.4 71 60.6
CARHR224600 Cardamine hirsuta HOM05D000567 ORTHO05D000767 3.4e-11 71.2 69 60.9
Sp7g16240 Schrenkiella parvula HOM05D000567 ORTHO05D000767 9.9e-11 69.7 71 57.7
AL8G11580 Arabidopsis lyrata HOM05D000567 ORTHO05D000767 1.7e-10 68.9 73 58.9
Carub.0008s0116 Capsella rubella HOM05D000567 ORTHO05D000767 1.7e-10 68.9 71 60.6
AT5G46760 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 2.2e-10 68.6 73 58.9
BcaB07g30822 Brassica carinata HOM05D000567 ORTHO05D000767 3.8e-10 67.8 68 55.9
BcaC04g21685 Brassica carinata HOM05D000567 ORTHO05D000767 4.9e-10 67.4 68 55.9
C09p28850 Brassica napus HOM05D000567 ORTHO05D000767 4.9e-10 67.4 68 55.9
BolC9t55747H Brassica oleracea HOM05D000567 ORTHO05D000767 4.9e-10 67.4 68 55.9
A09p22520 Brassica napus HOM05D000567 ORTHO05D000767 6.4e-10 67.0 68 55.9
Thhalv10024688m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 8.4e-10 66.6 68 57.4
BraA06t27438Z Brassica rapa HOM05D000567 ORTHO05D000767 1.4e-09 65.9 72 55.6
BcaC06g31449 Brassica carinata HOM05D000567 ORTHO05D000767 1.9e-09 65.5 72 55.6
BraA09t37859Z Brassica rapa HOM05D000567 ORTHO05D000767 1.9e-09 65.5 68 54.4
BcaC06g34350 Brassica carinata HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 52.8
A06p45690 Brassica napus HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 54.2
C07p30060 Brassica napus HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 52.8
BolC7t43546H Brassica oleracea HOM05D000567 ORTHO05D000767 2.4e-09 65.1 72 52.8
THA.LOC104806708 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 4.2e-09 64.3 72 54.2
THA.LOC104827760 Tarenaya hassleriana HOM05D000567 ORTHO05D000767 6.0e-08 60.5 70 60.0
BcaB03g12193 Brassica carinata HOM05D000567 ORTHO05D000767 1.3e-07 59.3 72 48.6
COL.COLO4_17030 Corchorus olitorius HOM05D000567 ORTHO05D000767 1.3e-07 59.3 72 50.0
BcaB03g13718 Brassica carinata HOM05D000567 ORTHO05D000767 3.0e-07 58.2 72 48.6
CANSAT21G0209 Cannabis sativa HOM05D000567 ORTHO05D000767 3.0e-07 58.2 76 46.1
BcaC05g27837 Brassica carinata HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
A05p24680 Brassica napus HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
C05p38350 Brassica napus HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
BolC5t32569H Brassica oleracea HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
BraA05t21352Z Brassica rapa HOM05D000567 ORTHO05D000767 5.1e-07 57.4 71 52.1
Sopen08g001070 Solanum pennellii HOM05D000567 ORTHO05D000767 5.1e-07 57.4 70 51.4
PGSC0003DMG400001161 Solanum tuberosum HOM05D000567 ORTHO05D000767 5.1e-07 57.4 69 46.4
Atru.chr6.1707 Acer truncatum HOM05D000567 ORTHO05D000767 6.7e-07 57.0 41 70.7
AT1G32640 Arabidopsis thaliana HOM05D000567 ORTHO05D000767 6.7e-07 57.0 72 45.8
QL12p005169 Quercus lobata HOM05D000567 ORTHO05D000767 6.7e-07 57.0 41 73.2
MSTRG.1986 Avicennia marina HOM05D000567 ORTHO05D000767 8.7e-07 56.6 47 63.8
BcaB07g32956 Brassica carinata HOM05D000567 ORTHO05D000767 8.7e-07 56.6 71 52.1
Carub.0001s3102 Capsella rubella HOM05D000567 ORTHO05D000767 8.7e-07 56.6 73 43.8
Dinv28959 Davidia involucrata HOM05D000567 ORTHO05D000767 8.7e-07 56.6 41 70.7
Gohir.D09G193200 Gossypium hirsutum HOM05D000567 ORTHO05D000767 8.7e-07 56.6 72 45.8
Gorai.006G216700 Gossypium raimondii HOM05D000567 ORTHO05D000767 8.7e-07 56.6 72 45.8
TPR.G1044 Trifolium pratense HOM05D000567 ORTHO05D000767 8.7e-07 56.6 50 66.0
Aa31LG2G13350 Aethionema arabicum HOM05D000567 ORTHO05D000767 1.1e-06 56.2 75 44.0
MSTRG.12159 Avicennia marina HOM05D000567 ORTHO05D000767 1.1e-06 56.2 58 55.2
Cpa.g.sc71.72 Carica papaya HOM05D000567 ORTHO05D000767 1.1e-06 56.2 75 42.7
Duzib084G0664 Durio zibethinus HOM05D000567 ORTHO05D000767 1.1e-06 56.2 41 65.9
Nitab4.5_0002539g0040 Nicotiana tabacum HOM05D000567 ORTHO05D000767 1.1e-06 56.2 68 42.6
AL1G46900 Arabidopsis lyrata HOM05D000567 ORTHO05D000767 1.5e-06 55.8 72 44.4
HanXRQChr06g0167481 Helianthus annuus HOM05D000567 ORTHO05D000767 1.5e-06 55.8 68 44.1
Nitab4.5_0000804g0160 Nicotiana tabacum HOM05D000567 ORTHO05D000767 1.5e-06 55.8 68 42.6
Psat2g136720 Pisum sativum HOM05D000567 ORTHO05D000767 1.5e-06 55.8 50 62.0
Potri.001G142200 Populus trichocarpa HOM05D000567 ORTHO05D000767 1.5e-06 55.8 72 45.8
Manes.15G182700 Manihot esculenta HOM05D000567 ORTHO05D000767 1.9e-06 55.5 75 52.0
Prupe.5G035400 Prunus persica HOM05D000567 ORTHO05D000767 1.9e-06 55.5 73 49.3
MELO3C003412.2 Cucumis melo HOM05D000567 ORTHO05D000767 2.5e-06 55.1 38 71.1
CsaV3_3G049150 Cucumis sativus L. HOM05D000567 ORTHO05D000767 2.5e-06 55.1 38 71.1
Gohir.A03G000700 Gossypium hirsutum HOM05D000567 ORTHO05D000767 2.5e-06 55.1 68 51.5
Gohir.D12G210800 Gossypium hirsutum HOM05D000567 ORTHO05D000767 2.5e-06 55.1 69 47.8
Rhsim07G0127300 Rhododendron simsii HOM05D000567 ORTHO05D000767 2.5e-06 55.1 74 40.5
Ca_06081_v3 Cicer arietinum L. HOM05D000567 ORTHO05D000767 3.3e-06 54.7 77 41.6
Duzib205G1461 Durio zibethinus HOM05D000567 ORTHO05D000767 3.3e-06 54.7 75 48.0
Migut.E00934 Erythranthe guttata HOM05D000567 ORTHO05D000767 3.3e-06 54.7 72 47.2
Gorai.003G182100 Gossypium raimondii HOM05D000567 ORTHO05D000767 3.3e-06 54.7 68 50.0
Gorai.008G226300 Gossypium raimondii HOM05D000567 ORTHO05D000767 3.3e-06 54.7 69 47.8
Sabra01G0110800 Salix brachista HOM05D000567 ORTHO05D000767 3.3e-06 54.7 72 45.8
TWI60G0750 Tripterygium wilfordii HOM05D000567 ORTHO05D000767 3.3e-06 54.7 73 46.6
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 4.3e-06 54.3 71 47.9
Eucgr.E00277 Eucalyptus grandis HOM05D000567 ORTHO05D000767 4.3e-06 54.3 75 46.7
Gohir.A09G201500 Gossypium hirsutum HOM05D000567 ORTHO05D000767 4.3e-06 54.3 72 45.8
Gohir.D03G171500 Gossypium hirsutum HOM05D000567 ORTHO05D000767 4.3e-06 54.3 68 50.0
Oeu017027.1 Olea europaea HOM05D000567 ORTHO05D000767 4.3e-06 54.3 38 71.1
Aa31LG9G15230 Aethionema arabicum HOM05D000567 ORTHO05D000767 5.6e-06 53.9 68 50.0
CDE06G2328 Ceratophyllum demersum HOM05D000567 ORTHO05D000767 5.6e-06 53.9 48 64.6
Gohir.D08G176900 Gossypium hirsutum HOM05D000567 ORTHO05D000767 5.6e-06 53.9 36 75.0
Gorai.004G184800 Gossypium raimondii HOM05D000567 ORTHO05D000767 5.6e-06 53.9 36 75.0
Sed0021616 Sechium edule HOM05D000567 ORTHO05D000767 5.6e-06 53.9 72 45.8
Thecc.03G227500 Theobroma cacao HOM05D000567 ORTHO05D000767 5.6e-06 53.9 75 45.3
CSS0029111 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D000767 7.4e-06 53.5 41 65.9
CSS0047466 Camellia sinensis var. sinensis HOM05D000567 ORTHO05D000767 7.4e-06 53.5 41 65.9
Thhalv10007075m.g Eutrema salsugineum HOM05D000567 ORTHO05D000767 7.4e-06 53.5 48 62.5
Gohir.A08G156400 Gossypium hirsutum HOM05D000567 ORTHO05D000767 7.4e-06 53.5 74 44.6
HanXRQChr05g0154351 Helianthus annuus HOM05D000567 ORTHO05D000767 7.4e-06 53.5 77 46.8
Manes.17G016000 Manihot esculenta HOM05D000567 ORTHO05D000767 7.4e-06 53.5 75 44.0
Nn1g08041 Nelumbo nucifera HOM05D000567 ORTHO05D000767 7.4e-06 53.5 41 65.9
Ciclev10011214m.g Citrus clementina HOM05D000567 ORTHO05D000767 9.6e-06 53.1 76 44.7
Cc08_g02790 Coffea canephora HOM05D000567 ORTHO05D000767 9.6e-06 53.1 41 65.9
DCAR_024963 Daucus carota HOM05D000567 ORTHO05D000767 9.6e-06 53.1 68 48.5
Potri.003G092200 Populus trichocarpa HOM05D000567 ORTHO05D000767 9.6e-06 53.1 72 44.4
Sed0018501 Sechium edule HOM05D000567 ORTHO05D000767 9.6e-06 53.1 48 60.4


User provided reference genes

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