Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc39G140 Aethionema arabicum HOM05D000216 ORTHO05D000634 7.7e-51 203.4 93 100.0
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.4e-28 128.6 126 54.8
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 4.6e-27 124.4 126 53.2
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.7e-26 122.5 126 52.4
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 1.7e-26 122.5 126 52.4
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 1.7e-26 122.5 126 52.4
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 6.6e-26 120.6 128 52.3
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 2.1e-24 115.5 73 74.0
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 5.8e-22 107.5 124 47.6
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.9e-22 106.7 125 46.4
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 8.4e-21 103.6 126 46.0
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-20 102.8 123 44.7
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-20 102.8 123 44.7
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-20 102.8 123 44.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.4e-20 102.8 123 44.7
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 3.2e-20 101.7 123 45.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.1e-19 99.0 125 44.8
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.7e-19 98.6 124 44.4
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 4.6e-19 97.8 125 44.0
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 4.6e-19 97.8 127 44.9
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.8e-19 97.1 125 43.2
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.3e-18 96.3 123 42.3
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.7e-18 95.9 120 45.8
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.3e-18 95.5 123 43.9
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 8.6e-18 93.6 126 43.7
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 8.6e-18 93.6 126 43.7
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.5e-17 92.0 122 45.1
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 122 42.6
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-17 90.9 125 43.2
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 9.6e-17 90.1 125 42.4
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 1.2e-16 89.7 127 40.2
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 125 41.6
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.1e-16 89.0 125 41.6
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 4.7e-16 87.8 126 41.3
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 1.4e-15 86.3 105 43.8
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 4.0e-15 84.7 65 60.0
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 3.4e-14 81.6 123 36.6
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 9.9e-14 80.1 126 37.3
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 6.4e-13 77.4 102 43.1
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 4.2e-12 74.7 125 37.6
Atru.chr6.1615 Acer truncatum HOM05D000216 ORTHO05D000634 1.2e-11 73.2 102 40.2
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-11 73.2 123 39.0
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.1e-11 72.4 120 36.7
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 2.7e-11 72.0 102 38.2
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.5e-11 71.6 90 43.3
CAN.G511.9 Capsicum annuum HOM05D000216 ORTHO05D000634 7.8e-11 70.5 102 38.2
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.3e-10 69.7 124 37.9
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 1.7e-10 69.3 100 38.0
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.7e-10 69.3 121 39.7
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 2.3e-10 68.9 120 39.2
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 2.3e-10 68.9 120 39.2
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 2.3e-10 68.9 120 39.2
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.3e-10 68.9 120 39.2
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 2.3e-10 68.9 120 39.2
Hund04025 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.0e-10 68.6 102 39.2
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 8.7e-10 67.0 103 35.9
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 1.5e-09 66.2 120 37.5
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.9e-09 65.9 126 31.7
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.9e-09 65.9 97 40.2
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.9e-09 65.9 97 42.3
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.9e-09 65.9 46 63.0
Lj1g0027665 Lotus japonicus HOM05D000216 ORTHO05D000634 2.5e-09 65.5 101 34.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-07 60.1 120 36.7
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.3e-07 57.8 93 35.5
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.9e-07 57.4 91 35.2
Oeu010681.1 Olea europaea HOM05D000216 ORTHO05D000634 9.0e-07 57.0 44 56.8
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-06 56.2 101 33.7
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-06 56.2 48 60.4
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 5.8e-06 54.3 117 29.1


User provided reference genes

Program Settings