Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 6.0e-138 494.2 252 100.0
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 7.5e-133 477.2 251 97.2
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 7.5e-133 477.2 251 97.2
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 9.8e-133 476.9 251 97.2
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 4.7e-127 458.0 243 96.7
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 4.7e-127 458.0 243 96.7
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 4.7e-127 458.0 243 96.7
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 8.1e-127 457.2 240 97.1
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 4.0e-126 454.9 243 96.3
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 1.6e-122 443.0 243 93.4
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.4e-118 429.9 243 91.4
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 5.2e-118 427.9 243 91.4
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 8.9e-118 427.2 240 92.5
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 3.4e-117 425.2 243 90.5
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 4.4e-117 424.9 240 92.1
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 4.4e-117 424.9 240 92.1
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 4.4e-117 424.9 240 92.1
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 4.4e-117 424.9 243 91.4
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.1e-115 420.2 243 89.7
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.1e-115 420.2 243 89.7
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 2.4e-115 419.1 243 90.9
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 9.2e-115 417.2 242 89.7
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 9.2e-115 417.2 232 92.7
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 6.0e-114 414.5 252 86.9
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 1.3e-113 413.3 242 88.4
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.7e-113 412.9 239 89.1
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.7e-113 412.9 239 89.1
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 2.5e-112 409.1 235 88.9
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.6e-111 406.4 243 87.7
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.6e-111 406.4 243 87.7
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 6.9e-110 401.0 243 87.7
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 2.0e-109 399.4 228 91.2
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.4e-107 393.3 232 89.2
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 2.4e-107 392.5 242 85.1
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.5e-106 388.7 232 86.6
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.7e-105 386.3 215 91.2
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.7e-105 386.3 215 91.2
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 2.3e-105 386.0 203 96.6
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.5e-104 383.3 228 88.6
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 5.6e-104 381.3 212 92.5
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 8.1e-103 377.5 212 91.5
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 1.8e-102 376.3 229 86.9
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 7.6e-101 370.9 192 97.4
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 9.9e-101 370.5 212 90.1
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 1.0e-97 360.5 210 87.1
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 2.3e-97 359.4 200 91.5
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 5.1e-97 358.2 192 96.4
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 3.7e-95 352.1 213 85.0
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 6.4e-92 341.3 198 87.9
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 9.3e-91 337.4 206 83.5
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 1.2e-90 337.0 230 78.7
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 6.0e-90 334.7 209 83.7
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 1.3e-87 327.0 180 91.7
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 1.6e-87 326.6 201 82.6
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 2.4e-86 322.8 243 73.7
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.2e-84 316.2 203 81.8
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 1.1e-83 313.9 170 92.4
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.5e-83 312.8 209 79.9
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 5.1e-81 305.1 173 90.8
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-79 300.4 189 84.7
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 2.2e-79 299.7 178 84.8
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 1.2e-77 293.9 168 89.3
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.5e-77 293.5 209 78.5
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 7.9e-74 281.2 210 75.7
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 1.0e-68 264.2 148 89.2
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.8e-65 253.4 212 67.0
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 5.1e-65 251.9 133 94.0
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 4.7e-58 228.8 139 83.5
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.3e-56 222.6 129 87.6
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 4.8e-55 218.8 112 93.8
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 6.3e-55 218.4 129 88.4
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 3.8e-52 209.1 124 87.9
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 9.7e-48 194.5 144 74.3
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 3.1e-46 189.5 108 88.9
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.6e-45 187.2 118 79.7
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 8.5e-44 181.4 99 96.0
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 7.2e-43 178.3 107 86.0
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 6.8e-41 171.8 108 81.5
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.0e-40 170.2 96 88.5
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 7.5e-40 168.3 100 82.0
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 2.8e-39 166.4 105 83.8
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 5.9e-37 158.7 168 58.3
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 2.3e-36 156.8 101 82.2
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 2.5e-35 153.3 110 73.6
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 5.5e-35 152.1 96 85.4
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 3.6e-34 149.4 73 97.3
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 1.0e-33 147.9 76 92.1
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 1.0e-33 147.9 92 81.5
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 4.9e-31 139.0 200 39.0
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.1e-30 137.9 79 84.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.8e-30 137.1 72 88.9
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.4e-30 135.6 68 94.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 4.7e-26 122.5 90 71.1
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.1e-25 119.8 65 87.7
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 9.8e-24 114.8 69 82.6
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 1.3e-23 114.4 60 91.7
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.9e-23 112.5 90 72.2
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 4.1e-22 109.4 59 94.9
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 5.8e-16 89.0 52 84.6
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 1.9e-14 84.0 127 44.9
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 3.2e-14 83.2 55 76.4
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 1.5e-11 74.3 53 79.2
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.5e-08 64.3 46 73.9
Aqoxy4G01620 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.0e-08 63.9 35 91.4
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.4e-08 63.2 44 75.0
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 4.4e-08 62.8 37 86.5
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 8.3e-07 58.5 35 82.9


User provided reference genes

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