Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc239G10 Aethionema arabicum HOM05D001325 ORTHO05D001540 3.8e-34 147.5 70 100.0
Aa31csc464G70 Aethionema arabicum HOM05D001325 ORTHO05D001540 2.6e-19 98.2 46 100.0
CARHR283240 Cardamine hirsuta HOM05D001325 ORTHO05D001540 5.9e-19 97.1 46 97.8
AL3G44440 Arabidopsis lyrata HOM05D001325 ORTHO05D001540 1.3e-18 95.9 46 97.8
AT2G07675 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 1.3e-18 95.9 46 97.8
ATMG00980 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 1.3e-18 95.9 46 97.8
Oeu040255.1 Olea europaea HOM05D001325 ORTHO05D001540 2.2e-18 95.1 74 64.9
SGA_v2.0_scaffold255G45513 Striga asiatica HOM05D001325 ORTHO05D001540 2.2e-18 95.1 74 64.9
SHI43533 Sapria himalayana HOM05D001325 ORTHO05D001540 3.8e-18 94.4 46 95.7
Sopen00g002640 Solanum pennellii HOM05D001325 ORTHO05D001540 3.8e-18 94.4 46 95.7
MSTRG.3525 Avicennia marina HOM05D001325 ORTHO05D001540 5.0e-18 94.0 74 64.9
BNapus_Darmor_BZH_scaffold_234p00060 Brassica napus HOM05D001325 ORTHO05D001540 5.0e-18 94.0 46 95.7
BolSC28t60355H Brassica oleracea HOM05D001325 ORTHO05D001540 5.0e-18 94.0 46 95.7
BraSC48t46256Z Brassica rapa HOM05D001325 ORTHO05D001540 5.0e-18 94.0 46 95.7
BraSC77t46665Z Brassica rapa HOM05D001325 ORTHO05D001540 5.0e-18 94.0 46 95.7
unitig_87.g28032 Utricularia gibba HOM05D001325 ORTHO05D001540 5.0e-18 94.0 74 64.9
SHI34630 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI36383 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI36771 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI36782 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI39812 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI49994 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI50801 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI51700 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI53190 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI53369 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI53372 Sapria himalayana HOM05D001325 ORTHO05D001540 8.5e-18 93.2 46 93.5
SHI39777 Sapria himalayana HOM05D001325 ORTHO05D001540 2.5e-17 91.7 46 91.3
SalBow1G5748 Salvia bowleyana HOM05D001325 ORTHO05D001540 3.2e-17 91.3 73 64.4
SHI51612 Sapria himalayana HOM05D001325 ORTHO05D001540 3.2e-17 91.3 46 91.3
PGR028G0006 Punica granatum HOM05D001325 ORTHO05D001540 5.5e-17 90.5 46 93.5
SHI36935 Sapria himalayana HOM05D001325 ORTHO05D001540 5.5e-17 90.5 46 89.1
SHI46090 Sapria himalayana HOM05D001325 ORTHO05D001540 5.5e-17 90.5 46 91.3
SHI54160 Sapria himalayana HOM05D001325 ORTHO05D001540 5.5e-17 90.5 46 91.3
CAN.G889.5 Capsicum annuum HOM05D001325 ORTHO05D001540 9.4e-17 89.7 46 91.3
SHI36142 Sapria himalayana HOM05D001325 ORTHO05D001540 9.4e-17 89.7 46 89.1
SHI38566 Sapria himalayana HOM05D001325 ORTHO05D001540 1.2e-16 89.4 46 89.1
Sed0022288 Sechium edule HOM05D001325 ORTHO05D001540 1.2e-16 89.4 46 91.3
Sed0024579 Sechium edule HOM05D001325 ORTHO05D001540 1.2e-16 89.4 46 91.3
COL.COLO4_03981 Corchorus olitorius HOM05D001325 ORTHO05D001540 1.6e-16 89.0 46 91.3
COL.COLO4_04481 Corchorus olitorius HOM05D001325 ORTHO05D001540 1.6e-16 89.0 46 91.3
SHI36581 Sapria himalayana HOM05D001325 ORTHO05D001540 1.6e-16 89.0 46 89.1
PGR031G1129 Punica granatum HOM05D001325 ORTHO05D001540 2.1e-16 88.6 46 89.1
Nitab4.5_0001796g0270 Nicotiana tabacum HOM05D001325 ORTHO05D001540 2.7e-16 88.2 46 87.0
SHI52150 Sapria himalayana HOM05D001325 ORTHO05D001540 2.7e-16 88.2 46 89.1
RcHm_v2.0_MTg0498391 Rosa chinensis HOM05D001325 ORTHO05D001540 3.6e-16 87.8 46 89.1
SHI43970 Sapria himalayana HOM05D001325 ORTHO05D001540 3.6e-16 87.8 73 60.3
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 4.7e-16 87.4 46 91.3
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 4.7e-16 87.4 46 91.3
LjContig00315g0013534 Lotus japonicus HOM05D001325 ORTHO05D001540 4.7e-16 87.4 46 91.3
Nitab4.5_0000172g1180 Nicotiana tabacum HOM05D001325 ORTHO05D001540 4.7e-16 87.4 65 66.2
Sc03g0005010 Simmondsia chinensis HOM05D001325 ORTHO05D001540 4.7e-16 87.4 46 91.3
Sc04g0005520 Simmondsia chinensis HOM05D001325 ORTHO05D001540 4.7e-16 87.4 46 91.3
SHI44576 Sapria himalayana HOM05D001325 ORTHO05D001540 6.1e-16 87.0 73 58.9
SHI44670 Sapria himalayana HOM05D001325 ORTHO05D001540 6.1e-16 87.0 46 89.1
SHI49794 Sapria himalayana HOM05D001325 ORTHO05D001540 6.1e-16 87.0 50 82.0
SHI35190 Sapria himalayana HOM05D001325 ORTHO05D001540 1.0e-15 86.3 73 60.3
SHI46908 Sapria himalayana HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
SHI51228 Sapria himalayana HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
SHI54219 Sapria himalayana HOM05D001325 ORTHO05D001540 1.4e-15 85.9 73 61.6
Hund27587 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund27666 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund27817 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund28083 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund28867 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund28882 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund29085 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund29471 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Hund29893 Selenicereus undatus HOM05D001325 ORTHO05D001540 1.4e-15 85.9 46 89.1
Aqoxy12s039 Aquilegia oxysepala HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
DCAR_016146 Daucus carota HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
DCAR_032436 Daucus carota HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
HanXRQChr00c0055g0571461 Helianthus annuus HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
HanXRQChr16g0504411 Helianthus annuus HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
HanXRQMTg0579641 Helianthus annuus HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
Lsat_1_v5_gn_1_24001 Lactuca sativa HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
Lsat_1_v5_gn_5_16521 Lactuca sativa HOM05D001325 ORTHO05D001540 1.8e-15 85.5 46 89.1
SHI38210 Sapria himalayana HOM05D001325 ORTHO05D001540 1.8e-15 85.5 45 88.9
SHI51658 Sapria himalayana HOM05D001325 ORTHO05D001540 1.8e-15 85.5 73 60.3
SHI42173 Sapria himalayana HOM05D001325 ORTHO05D001540 2.3e-15 85.1 46 84.8
SHI49107 Sapria himalayana HOM05D001325 ORTHO05D001540 2.3e-15 85.1 46 84.8
arahy.Tifrunner.gnm1.ann1.ALHF99 Arachis hypogaea HOM05D001325 ORTHO05D001540 3.9e-15 84.3 46 89.1
SHI49663 Sapria himalayana HOM05D001325 ORTHO05D001540 3.9e-15 84.3 46 87.0
HanXRQChr01g0017121 Helianthus annuus HOM05D001325 ORTHO05D001540 5.2e-15 84.0 46 87.0
HanXRQChr10g0305211 Helianthus annuus HOM05D001325 ORTHO05D001540 5.2e-15 84.0 46 87.0
Nitab4.5_0001788g0300 Nicotiana tabacum HOM05D001325 ORTHO05D001540 5.2e-15 84.0 46 87.0
SHI33930 Sapria himalayana HOM05D001325 ORTHO05D001540 5.2e-15 84.0 73 60.3
SHI35326 Sapria himalayana HOM05D001325 ORTHO05D001540 5.2e-15 84.0 46 87.0
SHI50625 Sapria himalayana HOM05D001325 ORTHO05D001540 5.2e-15 84.0 46 87.0
Lalb_Chr03g0038861 Lupinus albus HOM05D001325 ORTHO05D001540 8.8e-15 83.2 46 87.0
Lalb_Chr17g0337391 Lupinus albus HOM05D001325 ORTHO05D001540 8.8e-15 83.2 46 87.0
Medtr0082s0040 Medicago truncatula HOM05D001325 ORTHO05D001540 1.1e-14 82.8 46 87.0
SHI54388 Sapria himalayana HOM05D001325 ORTHO05D001540 1.5e-14 82.4 50 80.0
SHI38206 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-14 81.6 46 84.8
MBI10_g41321_MAGBIO Magnolia biondii HOM05D001325 ORTHO05D001540 3.3e-14 81.3 48 85.4
HanXRQChr10g0297181 Helianthus annuus HOM05D001325 ORTHO05D001540 4.4e-14 80.9 46 82.6
SHI39476 Sapria himalayana HOM05D001325 ORTHO05D001540 4.4e-14 80.9 46 80.4
VMungo1309G2626 Vigna mungo HOM05D001325 ORTHO05D001540 5.7e-14 80.5 46 87.0
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 7.4e-14 80.1 53 79.2
SHI36567 Sapria himalayana HOM05D001325 ORTHO05D001540 2.2e-13 78.6 46 84.8
SHI53577 Sapria himalayana HOM05D001325 ORTHO05D001540 4.8e-13 77.4 39 89.7
FvH4_5g00530 Fragaria vesca HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FvH4_7g21740 Fragaria vesca HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN03G1410 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN06G1419 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN06G2328 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN08G2386 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN10G4039 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN13G1785 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
FAN18G4430 Fragaria x ananassa HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
RcHm_v2.0_Chr5g0080691 Rosa chinensis HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
RcHm_v2.0_Chr7g0201871 Rosa chinensis HOM05D001325 ORTHO05D001540 6.3e-13 77.0 45 82.2
SHI27347 Sapria himalayana HOM05D001325 ORTHO05D001540 6.3e-13 77.0 48 79.2
arahy.Tifrunner.gnm1.ann1.KX3NGM Arachis hypogaea HOM05D001325 ORTHO05D001540 1.1e-12 76.3 40 92.5
PGSC0003DMG400021744 Solanum tuberosum HOM05D001325 ORTHO05D001540 1.8e-12 75.5 38 92.1
AagrBONN_evm.TU.Sc2ySwM_344.1250 Anthoceros agrestis HOM05D001325 ORTHO05D001540 4.1e-12 74.3 46 73.9
PSO170G5129 Papaver somniferum HOM05D001325 ORTHO05D001540 4.1e-12 74.3 44 81.8
PSO357G0201 Papaver somniferum HOM05D001325 ORTHO05D001540 4.1e-12 74.3 44 81.8
SHI36629 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 71.6 44 77.3
SHI39119 Sapria himalayana HOM05D001325 ORTHO05D001540 7.7e-11 70.1 46 71.7
CARHR287250 Cardamine hirsuta HOM05D001325 ORTHO05D001540 1.0e-10 69.7 33 97.0
HanXRQChr12g0367971 Helianthus annuus HOM05D001325 ORTHO05D001540 8.5e-10 66.6 48 70.8
Peaxi162Scf00588g00111 Petunia axillaris HOM05D001325 ORTHO05D005438 8.5e-10 66.6 34 94.1
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 1.9e-09 65.5 39 82.1
Nitab4.5_0002716g0110 Nicotiana tabacum HOM05D001325 ORTHO05D001540 1.9e-09 65.5 34 91.2
SHI38315 Sapria himalayana HOM05D001325 ORTHO05D001540 1.9e-09 65.5 44 70.5
SHI40461 Sapria himalayana HOM05D001325 ORTHO05D001540 2.5e-09 65.1 44 72.7
SHI49748 Sapria himalayana HOM05D001325 ORTHO05D001540 2.5e-09 65.1 46 73.9
arahy.Tifrunner.gnm1.ann1.2YD7KU Arachis hypogaea HOM05D001325 ORTHO05D001540 5.5e-09 63.9 34 91.2
arahy.Tifrunner.gnm1.ann1.TPY4ZQ Arachis hypogaea HOM05D001325 ORTHO05D001540 5.5e-09 63.9 34 91.2
arahy.Tifrunner.gnm1.ann1.XXM48B Arachis hypogaea HOM05D001325 ORTHO05D001540 5.5e-09 63.9 34 91.2
SHI48150 Sapria himalayana HOM05D001325 ORTHO05D001540 5.5e-09 63.9 44 70.5
Lalb_Chr00c24g0406961 Lupinus albus HOM05D001325 ORTHO05D001540 2.1e-08 62.0 41 75.6
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 2.1e-08 62.0 34 88.2
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.0e-07 59.7 35 82.9
SMO116G0334 Selaginella moellendorffii HOM05D001325 ORTHO05D001540 1.4e-07 59.3 45 62.2
CDE02G2710 Ceratophyllum demersum HOM05D001325 ORTHO05D001540 4.0e-07 57.8 34 82.4
SHI48751 Sapria himalayana HOM05D001325 ORTHO05D001540 4.0e-07 57.8 31 87.1
SHI35980 Sapria himalayana HOM05D001325 ORTHO05D001540 1.5e-06 55.8 35 77.1
SHI35334 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-06 53.1 34 76.5


User provided reference genes

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