Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 7.3e-170 600.5 314 100.0
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.1e-112 410.6 247 85.8
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 9.1e-112 407.5 247 84.6
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 4.5e-111 405.2 250 83.2
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 5.9e-111 404.8 250 83.2
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.7e-110 403.3 249 84.3
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.7e-108 396.0 250 81.2
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 1.5e-106 390.2 250 81.2
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 6.3e-105 384.8 245 81.6
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 6.3e-105 384.8 245 81.6
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 2.4e-104 382.9 250 79.6
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 8.0e-100 367.9 244 77.9
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 4.0e-99 365.5 248 77.0
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 7.5e-98 361.3 251 76.9
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 4.1e-96 355.5 246 74.8
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 7.8e-87 324.7 244 68.9
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 8.6e-86 321.2 244 66.0
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 1.5e-85 320.5 244 67.2
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.8e-83 313.5 245 67.3
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 4.0e-83 312.4 245 66.9
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 5.2e-83 312.0 245 66.1
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.0e-82 310.1 244 66.0
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.0e-82 310.1 245 66.1
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 7.5e-82 308.1 245 66.9
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 7.5e-82 308.1 245 66.5
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 3.7e-81 305.8 244 65.6
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 3.2e-80 302.8 244 65.6
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 1.2e-79 300.8 245 64.1
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 8.6e-78 294.7 244 63.1
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 4.7e-76 288.9 247 64.8
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 1.4e-75 287.3 246 62.2
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.8e-75 287.0 247 64.4
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.8e-75 287.0 247 64.4
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 2.6e-74 283.1 248 62.9
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 5.8e-74 282.0 250 63.2
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 4.9e-73 278.9 245 61.6
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 2.4e-72 276.6 249 60.2
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 2.4e-72 276.6 248 61.3
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 6.0e-71 271.9 247 60.3
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 7.8e-71 271.6 248 58.9
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 1.1e-69 267.7 248 59.3
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 1.6e-68 263.8 248 58.1
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 2.8e-68 263.1 246 58.5
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 2.8e-68 263.1 247 57.9
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 3.6e-68 262.7 246 58.5
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 4.7e-68 262.3 247 59.5
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 6.2e-68 261.9 246 58.5
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 8.1e-68 261.5 247 59.5
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 1.1e-67 261.2 244 57.4
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 1.8e-67 260.4 244 57.0
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 4.0e-67 259.2 251 58.6
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 5.2e-67 258.8 233 59.7
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.2e-66 257.7 251 56.6
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 3.4e-66 256.1 250 56.0
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 5.8e-66 255.4 244 54.9
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 7.6e-66 255.0 248 57.3
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.3e-65 254.2 249 56.6
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 1.7e-65 253.8 229 59.8
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 2.9e-65 253.1 244 54.9
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 3.8e-65 252.7 244 56.6
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 6.4e-65 251.9 248 53.6
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 1.1e-64 251.1 232 58.6
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 1.1e-64 251.1 245 56.3
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 1.1e-64 251.1 245 56.3
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 1.4e-64 250.8 248 54.0
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.9e-64 250.4 250 54.4
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 1.9e-64 250.4 244 58.2
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.9e-64 250.4 237 56.5
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 1.9e-64 250.4 234 59.0
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.9e-64 250.4 234 57.7
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 2.4e-64 250.0 236 57.6
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 2.4e-64 250.0 232 58.2
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.4e-64 250.0 243 55.6
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 5.4e-64 248.8 233 58.4
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 5.4e-64 248.8 249 53.8
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 7.1e-64 248.4 248 53.2
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 7.1e-64 248.4 250 56.4
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 9.3e-64 248.1 247 55.5
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 7.8e-63 245.0 234 57.7
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 7.8e-63 245.0 244 54.1
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 1.0e-62 244.6 234 57.7
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.9e-62 242.7 233 56.2
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.9e-62 242.7 233 56.2
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 5.1e-62 242.3 220 60.9
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 6.6e-62 241.9 250 52.8
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.1e-61 241.1 174 69.5
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.5e-61 240.7 234 56.4
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 1.9e-61 240.4 247 53.8
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 4.3e-61 239.2 234 55.6
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 4.3e-61 239.2 240 55.4
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 9.6e-61 238.0 233 57.1
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 9.6e-61 238.0 244 54.9
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.6e-60 236.1 251 53.4
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 8.1e-60 235.0 229 57.2
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.4e-59 234.2 234 55.6
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 3.1e-59 233.0 247 51.8
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 5.3e-59 232.3 237 56.1
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 9.0e-59 231.5 230 54.8
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.2e-58 231.1 230 54.8
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 5.8e-58 228.8 235 53.6
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 4.9e-57 225.7 243 52.3
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 8.4e-57 224.9 263 50.2
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 1.0e-54 218.0 232 54.3
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 1.0e-54 218.0 245 52.2
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.7e-54 217.2 248 52.0
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 5.1e-54 215.7 243 49.0
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 3.6e-52 209.5 254 47.6
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 1.1e-51 208.0 233 51.5
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 5.8e-50 202.2 220 50.9
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 1.3e-49 201.1 241 46.5
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 2.4e-43 180.3 120 73.3
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 2.0e-42 177.2 201 50.2
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 1.0e-41 174.9 187 52.4
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 4.3e-37 159.5 126 64.3
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 8.2e-36 155.2 170 50.0
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 6.5e-25 119.0 225 36.4
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 6.1e-23 112.5 121 48.8
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.3e-22 110.5 229 36.2
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 2.0e-21 107.5 139 46.8
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 1.7e-20 104.4 131 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 2.8e-20 103.6 164 40.2
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 4.1e-19 99.8 103 54.4
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 1.2e-18 98.2 152 44.7
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 2.2e-17 94.0 72 69.4
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 5.0e-17 92.8 72 65.3
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 1.5e-13 81.3 81 53.1
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 4.5e-10 69.7 112 42.0
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 2.9e-09 67.0 55 61.8
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 9.4e-08 62.0 79 44.3
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 4.7e-07 59.7 62 45.2
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 8.0e-07 58.9 72 43.1


User provided reference genes

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