Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G17400 Aethionema arabicum HOM05D001365 ORTHO05D058887 1.1e-32 142.9 79 100.0
Aa31LG2G2980 Aethionema arabicum HOM05D001365 ORTHO05D058828 3.1e-16 88.2 73 67.1
Sp7g04340 Schrenkiella parvula HOM05D001365 ORTHO05D001291 3.1e-16 88.2 71 70.4
BcaB06g27126 Brassica carinata HOM05D001365 ORTHO05D001291 4.5e-15 84.3 77 61.0
Carub.0002s1226 Capsella rubella HOM05D001365 ORTHO05D001291 1.3e-14 82.8 77 61.0
AL7G46560 Arabidopsis lyrata HOM05D001365 ORTHO05D001291 1.7e-14 82.4 71 73.2
THA.LOC104823841 Tarenaya hassleriana HOM05D001365 ORTHO05D001291 6.4e-14 80.5 69 66.7
A04p10900 Brassica napus HOM05D001365 ORTHO05D001291 1.9e-13 79.0 80 62.5
BraA04t16756Z Brassica rapa HOM05D001365 ORTHO05D001291 1.9e-13 79.0 80 62.5
Carub.0007s3288 Capsella rubella HOM05D001365 ORTHO05D001291 1.9e-13 79.0 80 66.2
C04p44650 Brassica napus HOM05D001365 ORTHO05D001291 2.4e-13 78.6 87 58.6
CARHR215120 Cardamine hirsuta HOM05D001365 ORTHO05D001291 4.2e-13 77.8 75 64.0
AL2G24000 Arabidopsis lyrata HOM05D001365 ORTHO05D001291 1.2e-12 76.3 78 60.3
AT1G66260 Arabidopsis thaliana HOM05D001365 ORTHO05D001291 2.7e-12 75.1 78 56.4
Thhalv10018970m.g Eutrema salsugineum HOM05D001365 ORTHO05D001291 3.0e-11 71.6 74 60.8
AT5G37720 Arabidopsis thaliana HOM05D001365 ORTHO05D001291 3.9e-11 71.2 68 64.7
BolC4t26038H Brassica oleracea HOM05D001365 ORTHO05D001291 3.9e-11 71.2 87 55.2
Sp5g21330 Schrenkiella parvula HOM05D001365 ORTHO05D001291 6.7e-11 70.5 74 60.8
GSVIVG01030785001 Vitis vinifera HOM05D001365 ORTHO05D001291 4.3e-10 67.8 76 53.9
THA.LOC104822306 Tarenaya hassleriana HOM05D001365 ORTHO05D001291 2.1e-09 65.5 68 60.3
COL.COLO4_32267 Corchorus olitorius HOM05D001365 ORTHO05D001291 3.7e-09 64.7 75 56.0
Thhalv10027861m.g Eutrema salsugineum HOM05D001365 ORTHO05D001291 1.2e-07 59.7 75 60.0
Peaxi162Scf00305g00056 Petunia axillaris HOM05D001365 ORTHO05D001291 2.6e-07 58.5 71 50.7
BcaC02g09607 Brassica carinata HOM05D001365 ORTHO05D001291 7.6e-07 57.0 78 51.3
Thecc.07G194100 Theobroma cacao HOM05D001365 ORTHO05D001291 1.3e-06 56.2 76 48.7
Ah.03g137860 Amaranthus hybridus HOM05D019590 ORTHO05D001291 1.7e-06 55.8 81 49.4
Nitab4.5_0005065g0040 Nicotiana tabacum HOM05D001365 ORTHO05D001291 1.7e-06 55.8 69 50.7
Lsat_1_v5_gn_2_69001 Lactuca sativa HOM05D001365 ORTHO05D001291 2.9e-06 55.1 72 52.8
Duzib187G1750 Durio zibethinus HOM05D001365 ORTHO05D001291 3.8e-06 54.7 75 53.3
Atru.chr1.1927 Acer truncatum HOM05D001365 ORTHO05D001291 4.9e-06 54.3 77 45.5
CANSAT64G0472 Cannabis sativa HOM05D001365 ORTHO05D001291 4.9e-06 54.3 84 44.0
Dinv28203 Davidia involucrata HOM05D001365 ORTHO05D001291 4.9e-06 54.3 75 46.7
Duzib268G1557 Durio zibethinus HOM05D001365 ORTHO05D001291 4.9e-06 54.3 70 50.0
HanXRQChr14g0444691 Helianthus annuus HOM05D001365 ORTHO05D001291 6.4e-06 53.9 69 47.8
QL02p058151 Quercus lobata HOM05D001365 ORTHO05D001291 8.4e-06 53.5 77 46.8


User provided reference genes

Program Settings