Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 3.6e-191 671.4 337 100.0
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 2.1e-170 602.4 339 89.1
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 3.1e-166 588.6 337 87.8
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 6.9e-166 587.4 340 87.6
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 9.0e-166 587.0 343 86.3
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 7.6e-165 583.9 338 87.6
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.0e-164 583.6 338 87.3
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 1.7e-164 582.8 341 86.2
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 7.1e-163 577.4 310 91.3
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 2.7e-162 575.5 310 91.6
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.3e-161 573.2 310 91.6
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 5.7e-160 567.8 310 89.7
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.3e-159 566.6 310 89.7
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.0e-156 557.0 337 83.1
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 2.6e-149 532.3 325 82.5
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 1.7e-148 529.6 336 80.4
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 1.7e-148 529.6 326 82.2
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.1e-147 526.9 319 83.1
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.4e-147 526.6 327 80.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 2.5e-147 525.8 341 78.3
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 3.2e-147 525.4 321 81.0
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 5.5e-147 524.6 321 82.2
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 9.4e-147 523.9 335 80.0
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.6e-146 523.1 335 80.0
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 1.6e-146 523.1 336 78.6
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 2.7e-146 522.3 315 82.9
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 4.7e-146 521.5 310 83.5
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 1.0e-145 520.4 319 81.2
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.0e-145 520.4 335 77.9
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.8e-145 519.6 315 81.9
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 3.0e-145 518.8 310 82.3
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 6.7e-145 517.7 307 82.4
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.1e-144 516.9 328 77.7
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 1.5e-144 516.5 327 79.5
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 2.0e-144 516.2 307 82.7
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 2.0e-144 516.2 326 80.1
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 2.0e-144 516.2 326 79.8
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 2.6e-144 515.8 319 81.2
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.6e-144 515.8 310 81.3
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 1.7e-143 513.1 332 78.3
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.7e-143 513.1 345 75.9
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.2e-143 512.7 310 82.3
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 2.2e-143 512.7 310 82.3
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 2.8e-143 512.3 310 82.6
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 4.8e-143 511.5 308 81.5
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.8e-143 511.5 310 82.6
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.1e-142 510.4 310 80.3
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 2.4e-142 509.2 326 78.5
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 2.4e-142 509.2 315 80.0
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 4.1e-142 508.4 319 79.3
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 4.1e-142 508.4 306 81.0
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 7.0e-142 507.7 302 82.5
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 9.1e-142 507.3 325 78.5
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.2e-141 506.9 318 79.9
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 1.2e-141 506.9 321 78.8
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 1.5e-141 506.5 321 78.8
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 4.5e-141 505.0 335 76.4
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 1.3e-140 503.4 327 77.7
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 1.7e-140 503.1 307 82.1
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 2.7e-138 495.7 309 80.3
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.3e-137 492.7 308 78.9
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 3.0e-137 492.3 308 80.2
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 5.2e-137 491.5 361 73.1
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 5.7e-136 488.0 310 77.4
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 9.7e-136 487.3 316 77.5
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 4.8e-135 485.0 316 77.2
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.8e-134 483.0 304 79.6
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.8e-134 483.0 374 68.2
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 1.7e-132 476.5 314 76.4
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.4e-129 466.8 337 72.1
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.5e-128 463.4 304 75.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 9.8e-128 460.7 336 72.3
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 3.7e-127 458.8 310 75.8
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.1e-126 457.2 332 72.0
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 5.4e-126 454.9 342 69.0
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 2.0e-125 453.0 314 72.3
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 4.2e-123 445.3 354 64.7
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 2.7e-122 442.6 292 76.7
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 3.6e-122 442.2 259 83.8
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.3e-121 439.5 322 69.9
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 5.2e-121 438.3 314 72.6
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.2e-120 437.2 317 72.2
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 7.5e-120 434.5 497 52.1
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 6.3e-119 431.4 287 76.0
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 8.3e-119 431.0 316 70.3
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 2.9e-116 422.5 309 72.5
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.5e-115 419.5 303 67.3
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 2.5e-115 419.5 305 69.2
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 8.0e-114 414.5 419 55.1
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.4e-113 413.7 277 76.5
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 9.8e-112 407.5 310 65.5
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.4e-110 403.7 252 79.0
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.4e-110 402.9 295 65.4
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 1.2e-109 400.6 240 81.2
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 3.9e-108 395.6 310 67.1
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 3.9e-108 395.6 243 81.1
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 6.6e-108 394.8 280 71.4
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 1.4e-105 387.1 300 65.0
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.0e-104 383.3 325 65.2
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 8.6e-100 367.9 255 72.5
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 4.3e-99 365.5 261 68.2
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 1.7e-92 343.6 244 72.1
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 1.9e-91 340.1 219 77.2
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 7.3e-91 338.2 334 56.3
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 6.8e-89 331.6 212 75.9
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 7.6e-88 328.2 226 69.5
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 9.9e-88 327.8 310 59.7
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 3.7e-87 325.9 299 55.9
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.9e-70 270.4 302 50.0
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 1.9e-70 270.4 177 75.7
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.2e-70 269.6 184 73.4
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.1e-65 254.6 211 65.9
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.3e-63 247.7 151 76.8
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 2.4e-62 243.4 157 75.8
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.6e-61 240.7 158 77.2
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.6e-59 232.3 490 34.7
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 2.4e-57 226.9 120 87.5
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.0e-56 223.8 118 89.0
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 7.9e-53 211.8 142 76.8
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 8.4e-47 191.8 228 50.9
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 2.5e-43 180.3 113 75.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 4.1e-41 172.9 264 37.1
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.1e-33 148.3 99 73.7
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 1.4e-33 147.9 291 33.0
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 1.1e-27 128.3 66 87.9
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.5e-24 116.7 61 91.8
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.3e-23 114.8 325 25.5
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.3e-23 114.8 85 71.8
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.2e-23 114.0 63 82.5
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 2.9e-23 113.6 59 91.5
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 7.2e-22 109.0 70 70.0
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 4.7e-21 106.3 64 81.2
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 2.4e-17 94.0 60 78.3
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.8e-12 77.8 60 63.3
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 2.8e-10 70.5 43 74.4
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.8e-09 67.8 33 87.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 1.0e-07 62.0 78 43.6
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 2.5e-06 57.4 111 31.5


User provided reference genes

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