Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G16510 Aethionema arabicum HOM05D004214 ORTHO05D004963 5.6e-43 177.2 88 100.0
Sp7g02430 Schrenkiella parvula HOM05D004214 ORTHO05D004963 2.5e-27 125.2 76 81.6
Thhalv10027904m.g Eutrema salsugineum HOM05D004214 ORTHO05D004963 1.3e-26 122.9 77 81.8
AL7G50770 Arabidopsis lyrata HOM05D004214 ORTHO05D004963 2.1e-26 122.1 88 71.6
A04p12290 Brassica napus HOM05D004214 ORTHO05D004963 4.8e-26 120.9 76 75.0
C04p45970 Brassica napus HOM05D004214 ORTHO05D004963 4.8e-26 120.9 76 75.0
BolC4t26180H Brassica oleracea HOM05D004214 ORTHO05D004963 4.8e-26 120.9 76 75.0
BraA04t16893Z Brassica rapa HOM05D004214 ORTHO05D004963 4.8e-26 120.9 76 75.0
AT5G39530 Arabidopsis thaliana HOM05D004214 ORTHO05D004963 1.1e-25 119.8 88 71.6
CARHR262760 Cardamine hirsuta HOM05D004214 ORTHO05D004963 1.4e-25 119.4 88 71.6
BcaB06g27341 Brassica carinata HOM05D004214 ORTHO05D004963 5.3e-25 117.5 76 73.7
Carub.0007s3642 Capsella rubella HOM05D004214 ORTHO05D004963 3.4e-24 114.8 90 67.8
Sp7g02440 Schrenkiella parvula HOM05D004214 ORTHO05D004963 1.3e-23 112.8 88 67.0
BcaB06g27340 Brassica carinata HOM05D004214 ORTHO05D004963 6.5e-23 110.5 76 71.1
CARHR262810 Cardamine hirsuta HOM05D004214 ORTHO05D004963 1.9e-22 109.0 76 71.1
AL7G50790 Arabidopsis lyrata HOM05D004214 ORTHO05D004963 7.1e-22 107.1 84 67.9
A04p12280 Brassica napus HOM05D004214 ORTHO05D004963 1.2e-21 106.3 76 68.4
C04p45960 Brassica napus HOM05D004214 ORTHO05D004963 1.2e-21 106.3 76 68.4
BolC4t26179H Brassica oleracea HOM05D004214 ORTHO05D004963 1.2e-21 106.3 76 68.4
BraA04t16892Z Brassica rapa HOM05D004214 ORTHO05D004963 1.2e-21 106.3 76 68.4
Thhalv10028063m.g Eutrema salsugineum HOM05D004214 ORTHO05D004963 1.6e-21 105.9 80 66.2
BcaB06g27320 Brassica carinata HOM05D004214 ORTHO05D004963 2.7e-21 105.1 76 67.1
BraA04t16891Z Brassica rapa HOM05D004214 ORTHO05D004963 4.6e-21 104.4 76 67.1
BcaB06g27319 Brassica carinata HOM05D004214 ORTHO05D004963 1.0e-20 103.2 76 65.8
A04p12270 Brassica napus HOM05D004214 ORTHO05D004963 1.0e-20 103.2 76 67.1
C04p45950 Brassica napus HOM05D004214 ORTHO05D004963 1.3e-20 102.8 77 64.9
BolC4t26178H Brassica oleracea HOM05D004214 ORTHO05D004963 1.8e-20 102.4 76 65.8
BolC9t55376H Brassica oleracea HOM05D004214 ORTHO05D004963 1.8e-20 102.4 69 71.0
Carub.0007s3643 Capsella rubella HOM05D004214 ORTHO05D004963 1.8e-20 102.4 67 74.6
AT5G39520 Arabidopsis thaliana HOM05D004214 ORTHO05D004963 3.9e-20 101.3 66 75.8
THA.LOC104805483 Tarenaya hassleriana HOM05D004214 ORTHO05D004963 1.5e-19 99.4 94 59.6
Duzib147G0992 Durio zibethinus HOM05D004214 ORTHO05D004963 7.7e-16 87.0 51 76.5
CSS0015906 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 1.3e-15 86.3 50 80.0
CSS0019671 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 1.3e-15 86.3 50 80.0
Ciclev10012515m.g Citrus clementina HOM05D004214 ORTHO05D004963 6.5e-15 84.0 73 61.6
GSVIVG01011460001 Vitis vinifera HOM05D004214 ORTHO05D004963 8.5e-15 83.6 50 76.0
Thecc.04G087300 Theobroma cacao HOM05D004214 ORTHO05D004963 1.4e-14 82.8 51 72.5
Manes.02G048700 Manihot esculenta HOM05D004214 ORTHO05D004963 2.5e-14 82.0 62 67.7
EL10Ac2g03019 Beta vulgaris HOM05D004214 ORTHO05D004963 4.2e-14 81.3 58 63.8
Hund15587 Selenicereus undatus HOM05D004214 ORTHO05D004963 5.5e-14 80.9 58 62.1
Nn4g23269 Nelumbo nucifera HOM05D004214 ORTHO05D004963 7.2e-14 80.5 53 67.9
TWI60G1366 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 9.4e-14 80.1 51 74.5
Actinidia06102 Actinidia chinensis HOM05D004214 ORTHO05D004963 1.6e-13 79.3 57 68.4
Cpa.g.sc14.113 Carica papaya HOM05D004214 ORTHO05D004963 1.6e-13 79.3 51 72.5
Rhsim10G0035800 Rhododendron simsii HOM05D004214 ORTHO05D004963 1.6e-13 79.3 49 75.5
unitig_62.g23442 Utricularia gibba HOM05D004214 ORTHO05D004963 2.1e-13 79.0 61 57.4
Dinv11505 Davidia involucrata HOM05D004214 ORTHO05D004963 3.6e-13 78.2 54 68.5
TAR629G3302 Trochodendron aralioides HOM05D004214 ORTHO05D004963 3.6e-13 78.2 51 70.6
Sabra17G0077200 Salix brachista HOM05D004214 ORTHO05D004963 4.6e-13 77.8 54 66.7
AUR62018111 Chenopodium quinoa HOM05D004214 ORTHO05D004963 6.1e-13 77.4 58 58.6
Migut.H00677 Erythranthe guttata HOM05D004214 ORTHO05D004963 6.1e-13 77.4 59 62.7
SalBow1G5883 Salvia bowleyana HOM05D004214 ORTHO05D004963 6.1e-13 77.4 59 61.0
SGA_v2.0_scaffold413G51175 Striga asiatica HOM05D004214 ORTHO05D004963 1.0e-12 76.6 52 65.4
AUR62034445 Chenopodium quinoa HOM05D004214 ORTHO05D004963 1.4e-12 76.3 58 56.9
Gohir.A07G206700 Gossypium hirsutum HOM05D004214 ORTHO05D004963 1.8e-12 75.9 47 72.3
Gorai.001G240700 Gossypium raimondii HOM05D004214 ORTHO05D004963 1.8e-12 75.9 47 72.3
CSS0036969 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 2.3e-12 75.5 50 70.0
PGR004G0346 Punica granatum HOM05D004214 ORTHO05D004963 2.3e-12 75.5 49 67.3
Sc10g0003430 Simmondsia chinensis HOM05D004214 ORTHO05D004963 2.3e-12 75.5 53 64.2
Cc07_g03630 Coffea canephora HOM05D004214 ORTHO05D004963 3.9e-12 74.7 48 68.8
ATR0564G445 Amborella trichopoda HOM05D004214 ORTHO05D004963 6.7e-12 73.9 71 53.5
MSTRG.23916 Avicennia marina HOM05D004214 ORTHO05D004963 6.7e-12 73.9 48 70.8
TWI34G0797 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 6.7e-12 73.9 57 68.4
TWI34G1333 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 6.7e-12 73.9 57 68.4
Potri.017G087500 Populus trichocarpa HOM05D004214 ORTHO05D004963 1.5e-11 72.8 51 66.7
Nitab4.5_0010283g0010 Nicotiana tabacum HOM05D004214 ORTHO05D004963 2.0e-11 72.4 83 47.0
Oeu010226.1 Olea europaea HOM05D004214 ORTHO05D004963 2.0e-11 72.4 57 63.2
Oeu010227.1 Olea europaea HOM05D004214 ORTHO05D004963 2.0e-11 72.4 57 63.2
Rhsim10G0035900 Rhododendron simsii HOM05D004214 ORTHO05D004963 2.0e-11 72.4 69 56.5
ECA232G2753 Erigeron canadensis HOM05D004214 ORTHO05D005214 2.5e-11 72.0 50 70.0
Eucgr.I02016 Eucalyptus grandis HOM05D004214 ORTHO05D004963 2.5e-11 72.0 47 70.2
Lsat_1_v5_gn_4_169740 Lactuca sativa HOM05D004214 ORTHO05D004963 2.5e-11 72.0 58 58.6
PSO017G4463 Papaver somniferum HOM05D004214 ORTHO05D004963 2.5e-11 72.0 53 64.2
PSO478G0939 Papaver somniferum HOM05D004214 ORTHO05D004963 2.5e-11 72.0 53 64.2
DCAR_011079 Daucus carota HOM05D004214 ORTHO05D004963 3.3e-11 71.6 71 54.9
HanXRQChr15g0487741 Helianthus annuus HOM05D004214 ORTHO05D004963 3.3e-11 71.6 62 54.8
Hma1.2p1_0409F.1_g146710 Hydrangea macrophylla HOM05D004214 ORTHO05D004963 3.3e-11 71.6 53 64.2
SEGI_32476 Sequoiadendron giganteum HOM05D004214 ORTHO05D004963 5.7e-11 70.9 46 69.6
Gohir.D11G074550 Gossypium hirsutum HOM05D004214 ORTHO05D004963 9.7e-11 70.1 51 66.7
Gorai.007G080000 Gossypium raimondii HOM05D004214 ORTHO05D004963 9.7e-11 70.1 51 66.7
Atru.chr8.322 Acer truncatum HOM05D004214 ORTHO05D004963 1.3e-10 69.7 50 64.0
Sopen02g016310 Solanum pennellii HOM05D004214 ORTHO05D004963 2.2e-10 68.9 57 59.6
Solyc02g067120.4 Solanum lycopersicum HOM05D004214 ORTHO05D004963 2.8e-10 68.6 57 57.9
CDE02G0918 Ceratophyllum demersum HOM05D004214 ORTHO05D004963 4.8e-10 67.8 47 66.0
Zm00001eb328430 Zea mays HOM05D004214 ORTHO05D004963 4.8e-10 67.8 64 50.0
PGSC0003DMG400025136 Solanum tuberosum HOM05D004214 ORTHO05D004963 6.3e-10 67.4 57 57.9
CAN.G979.5 Capsicum annuum HOM05D004214 ORTHO05D004963 2.4e-09 65.5 46 60.9
Os07g0633000 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 6.9e-09 63.9 52 59.6
Os10g0580600 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 3.4e-08 61.6 47 59.6
CARHR262800 Cardamine hirsuta HOM05D004214 ORTHO05D004963 4.5e-08 61.2 32 84.4
Lj3A346G23 Lonicera japonica HOM05D004214 ORTHO05D004963 5.9e-08 60.8 48 58.3
QL02p084825 Quercus lobata HOM05D004214 ORTHO05D004963 1.0e-07 60.1 54 50.0
CAN.G206.176 Capsicum annuum HOM05D004214 ORTHO05D004963 1.7e-07 59.3 69 46.4
CBR_g51334 Chara braunii HOM05D004214 ORTHO05D004963 1.7e-07 59.3 45 55.6
Peaxi162Scf00166g01050 Petunia axillaris HOM05D004214 ORTHO05D004963 2.9e-07 58.5 48 56.2
Psat1g070480 Pisum sativum HOM05D004214 ORTHO05D004963 5.0e-07 57.8 53 43.4
arahy.Tifrunner.gnm1.ann1.55PBKN Arachis hypogaea HOM05D004214 ORTHO05D004963 8.5e-07 57.0 57 43.9
arahy.Tifrunner.gnm1.ann1.7SZ544 Arachis hypogaea HOM05D004214 ORTHO05D004963 8.5e-07 57.0 57 43.9
Lj2g0002943 Lotus japonicus HOM05D004214 ORTHO05D004963 1.4e-06 56.2 53 43.4
Nitab4.5_0000568g0170 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.9e-06 55.8 48 52.1
Nitab4.5_0001591g0160 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.9e-06 55.8 48 52.1
Lj2g0001860 Lotus japonicus HOM05D004214 ORTHO05D004963 2.5e-06 55.5 53 41.5
QL02p084854 Quercus lobata HOM05D004214 ORTHO05D004963 5.5e-06 54.3 40 60.0
MD09G1055000 Malus domestica HOM05D004214 ORTHO05D004963 7.2e-06 53.9 71 39.4
Medtr6g012830 Medicago truncatula HOM05D004214 ORTHO05D004963 9.4e-06 53.5 60 40.0
PGSC0003DMG402001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 9.4e-06 53.5 60 46.7


User provided reference genes

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