Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 3.7e-109 398.3 208 100.0
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 4.7e-88 328.2 211 74.9
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 2.2e-85 319.3 211 73.0
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.8e-84 316.2 213 71.4
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 2.5e-81 305.8 213 70.9
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 5.2e-79 298.1 211 69.7
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 1.2e-78 297.0 211 69.2
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 1.2e-78 297.0 211 69.2
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 1.5e-78 296.6 212 70.3
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 2.6e-78 295.8 212 69.3
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 3.1e-76 288.9 212 68.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 7.7e-75 284.3 208 67.3
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.2e-72 276.9 212 66.5
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.6e-64 250.0 218 58.3
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 2.0e-62 243.0 217 58.1
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 4.9e-61 238.4 218 56.0
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 6.3e-61 238.0 216 54.6
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 3.1e-60 235.7 217 56.2
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 4.5e-59 231.9 215 54.4
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 5.9e-59 231.5 214 54.2
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 1.3e-58 230.3 171 67.8
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 1.1e-57 227.3 218 52.8
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.1e-57 227.3 214 53.3
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 2.5e-57 226.1 219 53.9
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 9.5e-57 224.2 217 52.5
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 1.2e-56 223.8 190 56.8
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.6e-56 223.4 217 53.5
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 2.1e-56 223.0 218 53.7
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 3.6e-56 222.2 211 55.0
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 3.6e-56 222.2 211 55.0
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 4.7e-56 221.9 220 52.7
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 6.1e-56 221.5 224 50.0
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.0e-55 220.7 217 52.5
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.4e-55 220.3 218 53.2
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 2.3e-55 219.5 214 51.9
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 3.1e-55 219.2 218 51.4
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 3.1e-55 219.2 222 51.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 5.2e-55 218.4 224 50.9
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 6.8e-55 218.0 217 53.0
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 6.8e-55 218.0 217 51.2
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.2e-54 217.2 175 60.0
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 1.2e-54 217.2 217 50.7
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 1.5e-54 216.9 229 49.3
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 1.5e-54 216.9 218 50.9
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.6e-54 216.1 217 50.7
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 2.6e-54 216.1 217 50.7
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 3.4e-54 215.7 213 52.6
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.8e-54 214.9 215 51.2
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 7.5e-54 214.5 217 52.5
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 7.5e-54 214.5 218 50.9
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 9.8e-54 214.2 215 52.6
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 9.8e-54 214.2 218 50.0
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.7e-53 213.4 217 50.2
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.7e-53 213.4 217 50.2
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.7e-53 213.4 187 54.0
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 1.7e-53 213.4 214 52.8
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 2.9e-53 212.6 219 51.1
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 2.9e-53 212.6 215 51.2
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 4.9e-53 211.8 212 50.9
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 4.9e-53 211.8 216 53.2
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 6.4e-53 211.5 218 50.9
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 8.3e-53 211.1 216 49.5
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.1e-52 210.7 223 49.8
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 4.1e-52 208.8 170 57.1
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 4.1e-52 208.8 214 50.0
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 1.6e-51 206.8 216 51.4
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 4.6e-51 205.3 162 56.8
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.0e-50 204.1 142 63.4
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 1.0e-50 204.1 154 60.4
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 2.3e-50 203.0 225 45.8
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 3.0e-50 202.6 220 47.7
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 3.9e-50 202.2 148 60.8
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 3.9e-50 202.2 212 48.1
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 8.6e-50 201.1 200 53.0
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 4.3e-49 198.7 210 50.0
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 1.2e-48 197.2 155 59.4
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.6e-48 196.8 158 55.7
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.6e-48 196.8 215 49.8
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 2.8e-48 196.1 215 49.8
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 3.6e-48 195.7 219 49.8
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 6.2e-48 194.9 205 52.7
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 6.2e-48 194.9 215 49.3
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 6.2e-48 194.9 139 70.5
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 8.0e-48 194.5 212 48.6
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 8.0e-48 194.5 215 48.8
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 3.1e-47 192.6 212 47.2
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 4.0e-47 192.2 148 57.4
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 5.2e-47 191.8 149 59.7
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 5.2e-47 191.8 159 54.7
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 3.4e-46 189.1 208 49.5
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 8.3e-45 184.5 155 56.8
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 2.7e-43 179.5 211 44.5
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.3e-42 177.2 193 50.3
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 2.5e-41 172.9 138 59.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 2.0e-38 163.3 142 62.0
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.6e-35 153.7 147 48.3
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 7.8e-35 151.4 134 44.8
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 7.1e-28 128.3 158 39.9
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 5.6e-25 118.6 135 41.5
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.0e-22 110.2 141 43.3
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.2e-21 106.7 82 54.9
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.9e-21 105.5 138 42.8
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.9e-20 103.6 161 32.3
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 2.0e-14 83.6 160 31.2
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 3.5e-11 72.8 52 57.7
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.1e-09 67.8 56 57.1
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 1.8e-07 60.5 68 48.5


User provided reference genes

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