Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 4.6e-253 877.5 462 100.0
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 1.6e-237 825.9 462 93.1
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.6e-237 825.9 462 93.5
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 6.6e-236 820.5 462 93.1
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 1.1e-230 803.1 462 90.5
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 9.3e-230 800.0 462 90.9
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 2.3e-228 795.4 462 90.5
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.9e-227 792.3 462 89.8
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.9e-227 792.3 462 89.8
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.9e-227 792.3 462 89.8
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.6e-226 789.3 462 90.0
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 1.1e-225 786.6 463 89.6
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 2.4e-225 785.4 463 89.4
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.6e-197 693.0 465 75.3
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 7.9e-197 690.6 464 75.9
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 2.2e-194 682.6 465 75.7
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.8e-193 679.5 464 75.6
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.8e-193 679.5 462 76.4
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.1e-193 678.7 464 75.0
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 7.0e-193 677.6 465 76.3
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 7.0e-193 677.6 464 73.9
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.0e-192 676.0 462 72.7
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 4.5e-192 674.9 464 77.4
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.0e-191 673.7 466 73.8
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.7e-191 672.9 462 74.0
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.7e-191 672.9 465 76.3
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 6.5e-191 671.0 464 75.4
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 6.5e-191 671.0 464 76.5
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 6.5e-191 671.0 462 73.6
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 8.5e-191 670.6 463 73.0
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 8.5e-191 670.6 464 72.6
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.1e-190 670.2 464 74.1
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.5e-190 669.8 464 73.5
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.5e-190 669.8 469 76.1
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 9.4e-190 667.2 464 75.4
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.6e-189 666.4 469 75.5
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 2.1e-189 666.0 462 75.3
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 2.1e-189 666.0 464 75.2
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 2.7e-189 665.6 464 72.6
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 2.7e-189 665.6 464 73.1
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 3.6e-189 665.2 468 75.2
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 6.1e-189 664.5 464 72.2
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.0e-188 663.7 464 74.1
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.8e-188 662.9 465 75.7
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.8e-188 662.9 464 72.6
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 2.3e-188 662.5 462 71.6
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.0e-188 662.1 416 79.3
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 3.0e-188 662.1 468 73.1
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 6.7e-188 661.0 464 74.1
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 8.8e-188 660.6 464 72.6
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.0e-187 659.4 462 73.2
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 5.7e-187 657.9 465 76.3
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 7.5e-187 657.5 465 74.8
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.3e-186 656.8 462 71.9
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 3.7e-186 655.2 465 75.1
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 4.8e-186 654.8 464 73.9
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 6.3e-186 654.4 462 71.9
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 1.1e-185 653.7 464 73.1
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.4e-185 652.5 462 71.2
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 3.1e-185 652.1 467 73.2
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 3.1e-185 652.1 489 70.3
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.2e-184 650.2 464 70.9
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.6e-184 649.8 463 72.4
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 2.7e-184 649.0 457 73.3
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.5e-184 648.3 463 72.1
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.1e-182 643.7 470 73.8
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 2.5e-182 642.5 479 67.6
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 3.2e-182 642.1 510 66.9
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 3.2e-182 642.1 462 71.0
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.5e-182 641.3 464 70.9
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 7.2e-182 641.0 465 73.3
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.1e-181 639.4 443 75.4
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 6.1e-181 637.9 466 71.9
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.0e-180 637.1 465 71.4
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 4.0e-180 635.2 465 71.2
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 2.2e-178 629.4 425 74.4
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 2.8e-178 629.0 425 74.1
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.7e-178 628.6 463 70.6
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.8e-177 626.3 469 69.1
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.7e-176 622.5 487 68.0
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 4.5e-176 621.7 463 69.3
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 7.7e-176 620.9 465 70.1
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.0e-175 620.5 465 70.5
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 5.0e-175 618.2 467 68.5
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.5e-174 616.7 469 71.0
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.9e-174 616.3 493 67.7
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.5e-174 615.9 465 70.1
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 3.2e-174 615.5 464 69.6
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 5.5e-174 614.8 469 70.8
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 7.2e-174 614.4 468 70.1
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.1e-173 612.8 418 73.0
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.0e-172 610.5 469 68.7
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.4e-172 610.1 470 70.4
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 2.3e-172 609.4 471 68.2
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.5e-171 606.7 465 70.1
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.7e-170 603.2 403 73.7
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.7e-170 603.2 463 68.7
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.4e-169 599.4 464 69.8
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 3.1e-169 599.0 459 66.4
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.2e-168 597.0 468 67.3
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 3.5e-168 595.5 463 66.1
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 2.3e-167 592.8 419 70.2
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.2e-163 580.5 398 72.6
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 3.4e-163 578.9 459 65.6
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.7e-162 576.6 455 67.0
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 7.0e-161 571.2 463 65.9
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.9e-158 563.1 399 71.9
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.5e-155 553.5 416 64.9
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 7.5e-155 551.2 416 69.5
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 2.9e-154 549.3 456 62.5
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 8.9e-140 501.1 380 70.5
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 8.1e-133 478.0 322 75.8
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 6.9e-132 474.9 399 59.4
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.6e-128 463.8 415 56.1
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.7e-128 463.0 405 55.3
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 7.1e-113 411.8 465 49.9
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 3.4e-99 366.3 291 63.2
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 3.8e-98 362.8 270 75.6
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.1e-97 361.3 419 48.9
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 9.7e-94 348.2 262 74.0
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 4.1e-92 342.8 558 36.9
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 6.5e-82 308.9 256 70.7
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 8.5e-82 308.5 256 70.7
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.7e-72 276.9 188 74.5
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.5e-49 200.7 210 57.1
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 5.2e-47 193.0 147 72.1
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.4e-44 184.9 145 66.2
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 6.6e-42 176.0 162 62.3
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.8e-39 167.9 124 72.6
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.3e-37 161.8 122 70.5
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.7e-35 154.1 372 30.6
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 5.1e-26 123.2 60 98.3
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.1e-15 89.0 70 70.0
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 3.1e-15 87.4 59 67.8
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 5.2e-15 86.7 57 71.9
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 8.1e-08 62.8 65 52.3


User provided reference genes

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