Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G14220 Aethionema arabicum HOM05D000442 ORTHO05D001242 8.6e-115 417.2 205 100.0
Aa31LG7G14240 Aethionema arabicum HOM05D000442 ORTHO05D001242 1.3e-46 190.7 189 57.1
CARHR113820 Cardamine hirsuta HOM05D000442 ORTHO05D001242 3.3e-42 176.0 198 54.5
Carub.0004s0175 Capsella rubella HOM05D000442 ORTHO05D001242 4.4e-42 175.6 197 53.3
BcaB08g35104 Brassica carinata HOM05D000442 ORTHO05D001242 1.3e-41 174.1 201 51.7
AL4G12140 Arabidopsis lyrata HOM05D000442 ORTHO05D001242 2.8e-41 172.9 197 52.3
Sp4g01640 Schrenkiella parvula HOM05D000442 ORTHO05D001242 4.8e-41 172.2 197 52.3
AT2G22600 Arabidopsis thaliana HOM05D000442 ORTHO05D001242 6.3e-41 171.8 197 52.3
Thhalv10000090m.g Eutrema salsugineum HOM05D000442 ORTHO05D001242 8.2e-41 171.4 197 52.3
BcaC07g41047 Brassica carinata HOM05D000442 ORTHO05D001242 1.1e-40 171.0 199 51.3
C08p40480 Brassica napus HOM05D000442 ORTHO05D001242 1.1e-40 171.0 199 51.3
BolC8t51619H Brassica oleracea HOM05D000442 ORTHO05D001242 1.1e-40 171.0 199 51.3
A04p17070 Brassica napus HOM05D000442 ORTHO05D001242 9.1e-40 167.9 192 50.5
BraA04t17336Z Brassica rapa HOM05D000442 ORTHO05D001242 9.1e-40 167.9 192 50.5
BcaC02g08640 Brassica carinata HOM05D000442 ORTHO05D001242 1.6e-39 167.2 192 50.0
C04p51810 Brassica napus HOM05D000442 ORTHO05D001242 1.6e-39 167.2 192 50.0
BolC4t26756H Brassica oleracea HOM05D000442 ORTHO05D001242 1.6e-39 167.2 192 50.0
A09p57400 Brassica napus HOM05D000442 ORTHO05D001242 3.5e-39 166.0 199 47.7
BraA09t41132Z Brassica rapa HOM05D000442 ORTHO05D001242 1.7e-38 163.7 204 47.5
THA.LOC104804179 Tarenaya hassleriana HOM05D000442 ORTHO05D001242 1.9e-29 133.7 174 47.1
BcaB08g35100 Brassica carinata HOM05D000442 ORTHO05D001242 1.2e-23 114.4 114 55.3
COL.COLO4_27374 Corchorus olitorius HOM05D000442 ORTHO05D001242 5.0e-22 109.0 171 39.2
Cpa.g.sc55.10 Carica papaya HOM05D000442 ORTHO05D001242 2.1e-20 103.6 172 39.0
Thecc.01G088600 Theobroma cacao HOM05D000442 ORTHO05D001242 2.8e-20 103.2 171 38.0
Duzib264G0380 Durio zibethinus HOM05D000442 ORTHO05D001242 7.5e-18 95.1 171 36.8
Sabra07G0009300 Salix brachista HOM05D000442 ORTHO05D001242 9.8e-18 94.7 165 37.0
TWI74G1061 Tripterygium wilfordii HOM05D000442 ORTHO05D001242 9.8e-18 94.7 165 36.4
Sabra15G0071400 Salix brachista HOM05D000442 ORTHO05D001242 1.3e-17 94.4 165 36.4
Gorai.008G093500 Gossypium raimondii HOM05D000442 ORTHO05D001242 2.9e-17 93.2 171 34.5
Gohir.D12G083500 Gossypium hirsutum HOM05D000442 ORTHO05D001242 3.7e-17 92.8 171 34.5
Duzib147G0101 Durio zibethinus HOM05D000442 ORTHO05D001242 6.4e-17 92.0 171 35.7
Manes.13G101500 Manihot esculenta HOM05D000442 ORTHO05D001242 1.8e-16 90.5 182 33.5
Potri.007G012000 Populus trichocarpa HOM05D000442 ORTHO05D001242 3.2e-16 89.7 165 35.8
Atru.chr3.1221 Acer truncatum HOM05D000442 ORTHO05D001242 9.2e-16 88.2 162 37.7
CANSAT01G2876 Cannabis sativa HOM05D000442 ORTHO05D001242 9.2e-16 88.2 195 33.8
Ciclev10025599m.g Citrus clementina HOM05D000442 ORTHO05D001242 2.3e-14 83.6 184 33.2
Glyma.01G021400 Glycine max HOM05D000442 ORTHO05D001242 2.3e-14 83.6 193 31.6
Potri.007G011900 Populus trichocarpa HOM05D000442 ORTHO05D001242 6.6e-14 82.0 165 36.4
Psat0s1830g0040 Pisum sativum HOM05D000442 ORTHO05D001242 2.5e-13 80.1 179 33.5
Glyma.09G200300 Glycine max HOM05D000442 ORTHO05D001242 4.3e-13 79.3 177 31.6
Lalb_Chr09g0325931 Lupinus albus HOM05D000442 ORTHO05D001242 5.6e-13 79.0 177 32.2
TAR381G0632 Trochodendron aralioides HOM05D000442 ORTHO05D001242 5.6e-13 79.0 172 32.6
Phvul.002G145300 Phaseolus vulgaris HOM05D000442 ORTHO05D001242 1.2e-12 77.8 183 30.1
VMungo1215G2533 Vigna mungo HOM05D000001 ORTHO05D000003 3.6e-12 76.3 196 29.6
Ca_25226_v3 Cicer arietinum L. HOM05D000442 ORTHO05D001242 4.7e-12 75.9 174 31.0
Lj2g0002599 Lotus japonicus HOM05D000442 ORTHO05D001242 6.2e-12 75.5 175 30.9
Medtr5g031720 Medicago truncatula HOM05D000442 ORTHO05D001242 8.0e-12 75.1 171 31.0
TAR628G0653 Trochodendron aralioides HOM05D000442 ORTHO05D001242 8.9e-11 71.6 172 33.1
Aqoxy6G00831 Aquilegia oxysepala HOM05D000442 ORTHO05D001242 3.4e-10 69.7 169 33.1
SHI21963 Sapria himalayana HOM05D000442 ORTHO05D001242 7.5e-10 68.6 211 28.9
PSO541G0350 Papaver somniferum HOM05D000442 ORTHO05D001242 1.3e-09 67.8 172 30.8
Nitab4.5_0001636g0040 Nicotiana tabacum HOM05D000442 ORTHO05D001242 1.7e-09 67.4 178 28.1
Nitab4.5_0002095g0100 Nicotiana tabacum HOM05D000442 ORTHO05D001242 1.7e-09 67.4 174 28.2
CAN.G504.87 Capsicum annuum HOM05D000442 ORTHO05D001242 1.9e-08 63.9 173 26.6
SGA_v2.0_scaffold83G26380 Striga asiatica HOM05D000442 ORTHO05D001242 1.9e-08 63.9 99 32.3
Nn5g29837 Nelumbo nucifera HOM05D000442 ORTHO05D001242 3.2e-08 63.2 172 29.1
Solyc01g106020.3 Solanum lycopersicum HOM05D000442 ORTHO05D001242 3.2e-08 63.2 180 27.2
PGSC0003DMG400033575 Solanum tuberosum HOM05D000442 ORTHO05D001242 3.2e-08 63.2 173 25.4
Sopen01g048400 Solanum pennellii HOM05D000442 ORTHO05D001242 4.1e-08 62.8 180 26.7
MSTRG.20278 Avicennia marina HOM05D000442 ORTHO05D001242 1.6e-07 60.8 165 27.9
vmacro19961 Vaccinium macrocarpon HOM05D000442 ORTHO05D001242 1.6e-07 60.8 174 27.6
Dinv16006 Davidia involucrata HOM05D000442 ORTHO05D001242 2.0e-07 60.5 170 26.5
Lsat_1_v5_gn_5_110160 Lactuca sativa HOM05D000442 ORTHO05D001242 3.5e-07 59.7 167 24.6
PGSC0003DMG400016189 Solanum tuberosum HOM05D000442 ORTHO05D001242 4.6e-07 59.3 164 29.3
Rhsim05G0101700 Rhododendron simsii HOM05D000442 ORTHO05D001242 1.0e-06 58.2 172 27.9
CDE07G1312 Ceratophyllum demersum HOM05D000442 ORTHO05D001242 1.3e-06 57.8 96 35.4
MBI16_g30321_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D001242 1.3e-06 57.8 173 30.1
Solyc11g010840.2 Solanum lycopersicum HOM05D000442 ORTHO05D001242 2.3e-06 57.0 146 30.1
Sopen11g005600 Solanum pennellii HOM05D000442 ORTHO05D001242 2.3e-06 57.0 146 30.1
PGSC0003DMG400037251 Solanum tuberosum HOM05D000442 ORTHO05D001242 2.3e-06 57.0 185 30.8
Hund06468 Selenicereus undatus HOM05D000442 ORTHO05D001242 3.0e-06 56.6 150 34.0
ECA234G4564 Erigeron canadensis HOM05D000442 ORTHO05D001242 3.9e-06 56.2 173 24.3
PGR004G0246 Punica granatum HOM05D000442 ORTHO05D001979 6.6e-06 55.5 171 32.2
TAR371G0560 Trochodendron aralioides HOM05D000442 ORTHO05D001979 6.6e-06 55.5 172 28.5


User provided reference genes

Program Settings