Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 4.4e-217 757.7 380 100.0
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 3.4e-161 572.0 345 83.5
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 5.4e-159 564.7 346 81.8
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 3.9e-157 558.5 351 78.6
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 5.1e-157 558.1 315 87.3
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 1.1e-156 557.0 315 86.7
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 1.1e-154 550.4 346 81.8
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 1.8e-154 549.7 318 85.2
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 5.2e-154 548.1 346 81.5
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 1.5e-153 546.6 316 85.4
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 1.5e-153 546.6 317 84.2
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 9.9e-153 543.9 346 80.6
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 2.2e-152 542.7 346 80.6
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 4.9e-152 541.6 316 83.2
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 8.4e-152 540.8 346 80.6
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 1.0e-141 507.3 327 72.8
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 6.6e-141 504.6 318 78.0
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 9.6e-140 500.7 328 72.9
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.8e-139 499.2 322 74.5
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 8.1e-139 497.7 357 67.8
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 1.8e-138 496.5 321 74.1
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.8e-138 496.5 320 74.1
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.4e-138 496.1 320 74.1
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 3.1e-138 495.7 329 75.4
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 4.0e-138 495.4 328 71.6
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 9.0e-138 494.2 314 72.9
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 1.5e-137 493.4 332 69.9
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 4.5e-137 491.9 352 67.9
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 5.8e-137 491.5 317 72.2
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 7.6e-137 491.1 291 83.5
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 8.4e-136 487.6 330 70.0
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 1.6e-134 483.4 334 69.5
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 4.6e-134 481.9 349 69.9
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 6.0e-134 481.5 325 71.4
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 6.0e-134 481.5 333 69.7
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 7.9e-134 481.1 321 74.8
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 1.8e-133 479.9 315 73.0
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 8.7e-133 477.6 312 72.8
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.1e-132 477.2 333 68.8
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 1.5e-132 476.9 327 69.1
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 7.4e-132 474.6 278 84.2
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 7.4e-132 474.6 354 67.2
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 9.6e-132 474.2 317 71.3
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 2.8e-131 472.6 326 66.3
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 1.8e-130 469.9 349 66.8
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 5.3e-130 468.4 321 69.2
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 5.3e-130 468.4 341 63.6
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 6.9e-130 468.0 314 71.3
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 1.2e-129 467.2 317 70.3
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 1.2e-129 467.2 338 66.0
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 1.5e-129 466.8 309 71.8
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 5.8e-129 464.9 332 66.6
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 9.9e-129 464.2 324 68.2
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 9.9e-129 464.2 339 66.1
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 6.4e-128 461.5 315 69.8
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 3.2e-127 459.1 308 70.1
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 4.2e-127 458.8 335 64.8
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 2.1e-126 456.4 320 68.4
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 4.6e-126 455.3 323 66.9
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 6.7e-125 451.4 309 68.6
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 6.7e-125 451.4 317 69.1
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 1.1e-124 450.7 335 65.7
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.5e-124 449.5 328 64.6
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 3.3e-124 449.1 348 63.5
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 7.4e-124 448.0 323 66.6
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 3.7e-123 445.7 317 67.8
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 1.8e-122 443.4 324 66.4
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 1.2e-121 440.7 322 65.5
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 3.4e-121 439.1 341 63.3
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 5.8e-121 438.3 344 62.8
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 2.2e-120 436.4 323 65.0
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 4.9e-120 435.3 325 64.0
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 1.9e-119 433.3 319 63.6
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 9.3e-119 431.0 346 61.6
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 3.5e-118 429.1 326 64.7
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 8.7e-117 424.5 317 64.7
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.5e-116 423.7 317 64.7
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 1.9e-116 423.3 348 59.8
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 5.7e-116 421.8 302 66.9
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 5.7e-116 421.8 302 66.9
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 9.7e-116 421.0 293 66.9
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 2.8e-115 419.5 341 60.4
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 3.7e-115 419.1 351 58.1
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 8.2e-115 417.9 225 87.6
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 2.4e-114 416.4 341 60.1
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 6.9e-114 414.8 261 73.2
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 2.0e-113 413.3 315 64.1
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 3.4e-113 412.5 337 60.5
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 3.4e-113 412.5 397 52.9
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 1.7e-112 410.2 324 62.3
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 2.2e-112 409.8 339 60.5
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 6.5e-112 408.3 324 61.7
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 1.4e-111 407.1 305 66.2
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 2.5e-111 406.4 325 61.5
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 4.2e-111 405.6 313 61.7
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 4.2e-111 405.6 291 67.0
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 5.5e-111 405.2 316 63.9
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 1.6e-110 403.7 316 62.3
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 6.1e-110 401.7 253 77.9
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.9e-109 399.1 315 63.8
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 5.1e-109 398.7 309 59.9
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 2.0e-108 396.7 317 62.8
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 2.8e-107 392.9 331 59.2
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 6.3e-107 391.7 340 57.6
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 1.8e-106 390.2 312 62.5
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 4.5e-105 385.6 264 67.0
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 3.2e-103 379.4 327 58.4
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 1.2e-102 377.5 322 59.0
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 8.8e-101 371.3 321 61.1
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 3.7e-99 365.9 268 62.7
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 1.2e-97 360.9 325 53.2
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 2.0e-97 360.1 339 52.8
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 5.9e-97 358.6 191 92.1
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 1.0e-96 357.8 377 53.3
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 2.9e-96 356.3 295 60.0
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 2.9e-96 356.3 285 63.2
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 8.8e-93 344.7 325 55.1
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 8.8e-93 344.7 306 54.6
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 4.8e-83 312.4 321 49.2
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 3.8e-80 302.8 286 52.4
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 4.2e-79 299.3 176 79.0
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 4.4e-76 289.3 184 71.7
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 9.8e-76 288.1 323 44.0
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 4.1e-74 282.7 194 67.5
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 7.2e-71 271.9 370 44.3
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.0e-69 268.1 208 60.6
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 1.3e-59 234.6 289 40.8
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.2e-59 233.8 291 44.3
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 2.2e-59 233.8 234 49.1
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 2.3e-56 223.8 209 57.4
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 2.5e-55 220.3 139 72.7
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 5.2e-53 212.6 170 58.2
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 5.8e-52 209.1 156 63.5
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 2.7e-49 200.3 251 41.4
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 3.0e-48 196.8 245 42.4
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 3.6e-46 189.9 194 53.6
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 4.7e-46 189.5 194 53.6
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 5.1e-40 169.5 275 35.6
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.1e-37 161.8 116 68.1
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 5.8e-36 156.0 173 48.0
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 1.3e-30 138.3 123 55.3
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 1.8e-29 134.4 270 34.8
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 3.0e-24 117.1 120 49.2
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 2.5e-23 114.0 66 77.3
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 2.4e-21 107.5 112 46.4
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 5.8e-20 102.8 281 28.1
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 4.9e-19 99.8 89 58.4
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 4.9e-19 99.8 89 58.4
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 4.3e-15 86.7 49 83.7
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 5.3e-13 79.7 112 41.1
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 6.9e-13 79.3 50 78.0
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 2.9e-11 73.9 71 52.1
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 1.1e-10 72.0 64 56.2
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.5e-07 60.8 46 56.5


User provided reference genes

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