Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 0.0e+00 1080.9 540 100.0
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 6.4e-206 721.1 540 69.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.0e-203 712.2 540 69.3
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 6.6e-203 711.1 536 68.8
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 2.8e-201 705.7 537 67.2
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 6.9e-200 701.0 538 67.7
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 9.0e-200 700.7 537 66.3
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 1.3e-198 696.8 537 66.9
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.1e-197 693.7 537 66.1
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.4e-197 693.3 536 67.7
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 1.9e-197 693.0 537 65.9
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 3.7e-193 678.7 537 64.4
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.4e-189 666.8 537 65.2
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 4.4e-154 548.9 535 53.3
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 2.5e-149 533.1 391 68.5
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 8.8e-147 524.6 528 50.4
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 3.3e-146 522.7 547 50.5
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 1.4e-144 517.3 525 51.4
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.4e-144 516.5 558 49.1
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 5.3e-144 515.4 525 51.0
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 4.5e-143 512.3 545 49.7
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.2e-140 504.2 525 49.9
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 7.5e-138 495.0 543 49.0
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.8e-136 490.3 532 49.6
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 3.1e-136 489.6 532 48.1
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 4.5e-135 485.7 534 49.3
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 5.9e-135 485.3 398 63.1
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.2e-133 479.2 533 49.0
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 9.5e-133 478.0 554 46.8
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 6.1e-132 475.3 542 46.5
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 6.8e-131 471.9 474 51.5
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 6.8e-131 471.9 543 45.7
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.2e-130 471.1 542 46.5
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.6e-130 469.9 541 45.8
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 9.8e-130 468.0 543 47.0
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 2.2e-129 466.8 543 45.7
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.3e-126 457.6 535 46.2
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.9e-126 456.4 496 47.0
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 5.0e-126 455.7 536 45.1
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 1.5e-125 454.1 527 46.1
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.5e-125 453.4 544 45.6
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 7.3e-125 451.8 546 44.3
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 9.5e-125 451.4 424 53.1
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.8e-124 449.9 555 44.7
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 8.0e-124 448.4 576 43.4
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 4.4e-122 442.6 546 44.0
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 6.4e-121 438.7 527 43.8
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.1e-120 438.0 528 44.5
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 6.0e-119 432.2 530 45.8
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.9e-117 427.2 601 41.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 2.5e-117 426.8 525 44.6
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 4.3e-117 426.0 512 46.1
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 7.3e-117 425.2 520 45.2
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 6.8e-115 418.7 585 40.7
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.0e-114 417.2 510 46.1
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.4e-114 416.0 539 44.2
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 7.5e-114 415.2 485 46.8
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 7.5e-114 415.2 537 42.8
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 9.8e-114 414.8 529 41.4
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 2.2e-113 413.7 437 48.7
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 3.7e-113 412.9 471 46.3
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 4.9e-113 412.5 524 43.5
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 8.3e-113 411.8 479 45.7
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.1e-112 411.4 397 54.2
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 5.4e-112 409.1 523 43.4
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 5.1e-110 402.5 594 39.2
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 2.5e-109 400.2 570 39.8
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 3.3e-109 399.8 699 35.5
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 7.3e-109 398.7 411 49.4
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.6e-106 390.2 478 44.4
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 5.8e-106 389.0 391 49.6
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 3.5e-103 379.8 473 43.8
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 3.0e-102 376.7 466 42.5
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 6.8e-99 365.5 417 45.1
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.2e-98 364.8 416 46.6
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.2e-97 360.5 430 46.3
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.2e-97 360.5 428 45.8
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.9e-97 360.1 517 39.8
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.6e-95 354.4 569 37.8
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 3.5e-95 353.2 394 47.7
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 6.0e-95 352.4 392 44.9
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 7.8e-95 352.1 510 42.0
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 1.2e-92 344.7 557 37.0
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.1e-91 341.7 358 48.6
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.8e-91 340.9 432 43.8
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 6.9e-91 339.0 378 47.6
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 9.0e-91 338.6 543 36.6
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.3e-84 318.2 451 41.2
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.8e-84 317.0 407 42.3
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 1.2e-82 311.6 403 43.2
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 3.5e-79 300.1 385 41.8
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 2.0e-74 284.3 363 39.9
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.4e-72 278.1 280 49.3
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.9e-64 251.1 305 42.3
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 3.8e-57 226.9 342 38.0
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 2.4e-51 207.6 503 29.0
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 5.9e-50 203.0 236 46.2
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 7.7e-50 202.6 215 48.4
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 7.2e-48 196.1 504 27.8
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.8e-38 164.9 224 38.4
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 1.6e-31 141.7 288 33.0
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 2.2e-28 131.3 212 35.8
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.2e-26 125.6 382 28.5
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 1.7e-25 121.7 223 30.9
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 4.2e-24 117.1 209 32.1
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.0e-14 85.9 154 33.8
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.4e-14 85.5 106 39.6
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 4.0e-14 84.0 94 41.5
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 1.2e-13 82.4 150 38.0
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.2e-13 82.4 186 30.6
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-08 65.9 88 39.8


User provided reference genes

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