Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.6e-77 292.7 150 100.0
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 2.5e-67 258.8 149 87.2
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 7.3e-67 257.3 149 86.6
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-66 256.5 149 85.9
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.6e-66 256.1 149 85.2
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 8.1e-66 253.8 149 85.2
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.8e-65 252.7 149 85.2
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.8e-65 252.7 149 85.2
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 4.0e-65 251.5 152 84.9
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.0e-64 249.2 145 86.2
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 8.3e-63 243.8 145 84.8
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.1e-62 243.4 149 83.2
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 6.0e-61 237.7 149 77.9
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 9.0e-49 197.2 140 68.6
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 9.9e-48 193.7 143 66.4
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.7e-47 193.0 149 63.1
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 4.9e-47 191.4 143 67.1
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.9e-46 189.5 133 69.9
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 7.1e-46 187.6 150 64.7
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.7e-45 185.7 150 64.0
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 6.0e-45 184.5 150 64.0
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.3e-44 183.3 144 63.9
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.3e-44 183.3 135 65.2
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.7e-44 183.0 143 63.6
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.7e-44 183.0 133 66.2
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.3e-44 182.6 135 66.7
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 3.9e-44 181.8 136 69.9
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 3.9e-44 181.8 124 72.6
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 8.7e-44 180.6 149 62.4
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 8.7e-44 180.6 150 61.3
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 2.5e-43 179.1 133 66.2
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 3.3e-43 178.7 132 65.9
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 4.3e-43 178.3 143 60.8
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 7.3e-43 177.6 129 67.4
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 1.3e-42 176.8 154 58.4
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.3e-42 176.8 140 65.7
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.3e-42 176.8 129 65.9
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 2.1e-42 176.0 132 65.2
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.6e-42 175.3 145 63.4
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 3.6e-42 175.3 131 65.6
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 6.2e-42 174.5 132 64.4
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 6.2e-42 174.5 144 59.0
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 6.2e-42 174.5 148 61.5
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 8.1e-42 174.1 126 66.7
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 8.1e-42 174.1 124 67.7
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 8.1e-42 174.1 124 66.9
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.4e-41 173.3 150 58.7
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 3.1e-41 172.2 134 62.7
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 4.0e-41 171.8 126 65.1
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 6.9e-41 171.0 151 61.6
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 6.9e-41 171.0 132 62.9
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 9.0e-41 170.6 126 66.7
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 1.2e-40 170.2 154 57.8
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.0e-40 169.5 124 64.5
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 2.6e-40 169.1 124 64.5
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 2.6e-40 169.1 155 60.6
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 4.5e-40 168.3 132 62.9
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 7.6e-40 167.5 126 65.1
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.7e-39 166.4 131 61.8
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.1e-38 163.7 131 61.8
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.4e-38 163.3 141 61.0
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.4e-38 163.3 122 63.9
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.4e-38 163.3 122 63.9
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.9e-38 162.9 126 63.5
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 2.4e-38 162.5 115 69.6
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 2.4e-38 162.5 127 64.6
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 4.2e-38 161.8 151 55.6
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 4.2e-38 161.8 120 65.0
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 4.2e-38 161.8 120 65.0
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 7.1e-38 161.0 130 58.5
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 7.1e-38 161.0 131 60.3
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 2.1e-37 159.5 133 57.9
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 2.1e-37 159.5 120 63.3
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.5e-37 158.7 126 59.5
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 7.9e-37 157.5 120 61.7
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.0e-36 157.1 127 60.6
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.3e-36 156.8 136 57.4
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.5e-35 153.3 127 60.6
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.9e-35 152.9 120 61.7
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.3e-35 151.8 105 67.6
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 9.6e-35 150.6 120 58.3
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 1.3e-34 150.2 128 53.9
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 1.3e-34 150.2 129 55.8
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.1e-34 149.4 105 66.7
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 2.8e-34 149.1 124 59.7
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.7e-34 148.7 102 68.6
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.8e-34 148.3 120 60.0
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 5.3e-33 144.8 184 47.8
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 5.8e-32 141.4 98 67.3
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 9.9e-32 140.6 115 62.6
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 2.2e-31 139.4 99 64.6
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 3.8e-31 138.7 120 56.7
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 8.4e-31 137.5 157 51.0
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 9.3e-30 134.0 113 60.2
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 6.0e-29 131.3 117 60.7
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 6.0e-29 131.3 169 43.8
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 1.0e-28 130.6 96 65.6
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.3e-28 130.2 121 55.4
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.8e-28 129.8 122 58.2
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 5.1e-28 128.3 119 49.6
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 4.3e-27 125.2 110 57.3
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 5.6e-27 124.8 123 48.8
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.7e-26 122.1 96 64.6
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.1e-25 120.6 116 52.6
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 3.1e-25 119.0 120 47.5
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.1e-25 119.0 116 51.7
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 3.1e-25 119.0 117 52.1
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.7e-23 113.2 98 59.2
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.9e-22 109.8 94 57.4
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.6e-21 106.7 98 57.1
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 3.9e-20 102.1 105 47.6
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.5e-19 100.1 90 55.6
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.6e-18 96.7 100 43.0
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 5.3e-17 91.7 98 48.0
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 6.9e-17 91.3 116 47.4
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 2.6e-16 89.4 74 59.5
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 7.6e-16 87.8 124 41.1
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 4.2e-14 82.0 71 56.3
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 3.0e-12 75.9 116 31.9
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.1e-11 73.9 80 51.2
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 1.5e-11 73.6 149 32.2
Cre01.g021000 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D147271 2.5e-06 56.2 108 31.5


User provided reference genes

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