Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G9190 Aethionema arabicum HOM05D005117 ORTHO05D005956 0.0e+00 1199.9 605 100.0
Sp5g26520 Schrenkiella parvula HOM05D005117 ORTHO05D005956 4.6e-285 984.2 608 82.4
Thhalv10018306m.g Eutrema salsugineum HOM05D005117 ORTHO05D005956 1.7e-284 982.2 610 82.3
CARHR064630 Cardamine hirsuta HOM05D005117 ORTHO05D005956 3.1e-281 971.5 610 80.8
AL2G31010 Arabidopsis lyrata HOM05D005117 ORTHO05D005956 2.9e-279 964.9 610 80.8
BraA07t31328Z Brassica rapa HOM05D005117 ORTHO05D005956 8.3e-279 963.4 610 81.0
AT1G71350 Arabidopsis thaliana HOM05D005117 ORTHO05D005956 1.1e-278 963.0 607 81.2
C06p45410 Brassica napus HOM05D005117 ORTHO05D005956 1.4e-278 962.6 610 81.1
A07p37640 Brassica napus HOM05D005117 ORTHO05D005956 3.2e-278 961.4 611 81.0
BcaC08g46567 Brassica carinata HOM05D005117 ORTHO05D005956 4.1e-278 961.1 610 81.0
Carub.0002s1821 Capsella rubella HOM05D005117 ORTHO05D005956 5.4e-278 960.7 610 80.8
BolC6t39599H Brassica oleracea HOM05D005117 ORTHO05D005956 9.2e-278 959.9 610 81.0
BcaB03g14892 Brassica carinata HOM05D005117 ORTHO05D005956 1.2e-274 949.5 611 80.0
THA.LOC104810302 Tarenaya hassleriana HOM05D005117 ORTHO05D005956 3.7e-263 911.4 613 75.2
Cpa.g.sc142.12 Carica papaya HOM05D005117 ORTHO05D005956 1.8e-249 865.9 614 71.5
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 6.6e-244 847.4 614 68.7
QL09p001419 Quercus lobata HOM05D005117 ORTHO05D005956 1.6e-242 842.8 625 68.0
Thecc.08G180900 Theobroma cacao HOM05D005117 ORTHO05D005956 1.4e-241 839.7 614 69.4
Potri.013G096600 Populus trichocarpa HOM05D005117 ORTHO05D005956 1.5e-240 836.3 616 68.8
COL.COLO4_25130 Corchorus olitorius HOM05D005117 ORTHO05D005956 5.8e-240 834.3 614 69.4
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 1.7e-239 832.8 617 69.0
Dinv22143 Davidia involucrata HOM05D005117 ORTHO05D005956 2.9e-239 832.0 612 68.1
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 1.1e-238 830.1 616 68.2
Gohir.D08G250900 Gossypium hirsutum HOM05D005117 ORTHO05D005956 1.9e-238 829.3 615 68.8
Gorai.004G267600 Gossypium raimondii HOM05D005117 ORTHO05D005956 1.9e-238 829.3 615 68.8
CSS0010464 Camellia sinensis var. sinensis HOM05D005117 ORTHO05D005956 5.5e-238 827.8 615 67.6
Medtr4g030200 Medicago truncatula HOM05D005117 ORTHO05D005956 5.5e-238 827.8 608 69.1
Ciclev10019359m.g Citrus clementina HOM05D005117 ORTHO05D005956 1.2e-237 826.6 609 69.1
Lj3g0005068 Lotus japonicus HOM05D005117 ORTHO05D005956 1.2e-237 826.6 614 68.2
Gohir.A08G230500 Gossypium hirsutum HOM05D005117 ORTHO05D005956 1.6e-237 826.2 615 68.6
GSVIVG01037192001 Vitis vinifera HOM05D005117 ORTHO05D005956 1.6e-237 826.2 616 67.2
MD10G1002600 Malus domestica HOM05D005117 ORTHO05D005956 2.1e-237 825.9 613 67.4
ClCG11G008340 Citrullus lanatus HOM05D005117 ORTHO05D005956 2.7e-237 825.5 622 67.8
TPR.G34118 Trifolium pratense HOM05D005117 ORTHO05D005956 1.8e-236 822.8 615 68.6
arahy.Tifrunner.gnm1.ann1.T5KNPK Arachis hypogaea HOM05D005117 ORTHO05D005956 3.0e-236 822.0 623 66.9
Ca_13614_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 3.0e-236 822.0 614 67.8
Psat7g227480 Pisum sativum HOM05D005117 ORTHO05D005956 5.1e-236 821.2 614 68.2
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 1.5e-235 819.7 614 66.8
CANSAT21G1171 Cannabis sativa HOM05D005117 ORTHO05D005956 4.3e-235 818.1 608 67.8
CsaV3_2G033280 Cucumis sativus L. HOM05D005117 ORTHO05D005956 7.4e-235 817.4 622 66.7
CiPaw.03G013100 Carya illinoinensis HOM05D005117 ORTHO05D005956 9.6e-235 817.0 615 67.3
Nitab4.5_0001489g0010 Nicotiana tabacum HOM05D005117 ORTHO05D005956 1.6e-234 816.2 613 67.5
Sopen11g020570 Solanum pennellii HOM05D005117 ORTHO05D005956 4.8e-234 814.7 612 67.3
RcHm_v2.0_Chr6g0250391 Rosa chinensis HOM05D005117 ORTHO05D005956 6.2e-234 814.3 613 66.4
Lalb_Chr03g0033811 Lupinus albus HOM05D005117 ORTHO05D005956 1.1e-233 813.5 613 66.2
PGSC0003DMG401019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 1.1e-233 813.5 612 67.5
Lj9A696G55 Lonicera japonica HOM05D005117 ORTHO05D005956 2.4e-233 812.4 624 66.3
Sed0010084 Sechium edule HOM05D005117 ORTHO05D005956 5.3e-233 811.2 620 66.1
Solyc11g045120.3 Solanum lycopersicum HOM05D005117 ORTHO05D005956 5.3e-233 811.2 612 67.2
Nitab4.5_0000009g0430 Nicotiana tabacum HOM05D005117 ORTHO05D005956 1.0e-231 807.0 614 67.1
FAN20G0498 Fragaria x ananassa HOM05D005117 ORTHO05D005956 8.4e-231 803.9 616 65.7
Hma1.2p1_0016F.1_g010920 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 1.1e-230 803.5 603 66.2
arahy.Tifrunner.gnm1.ann1.H62643 Arachis hypogaea HOM05D005117 ORTHO05D005956 9.3e-230 800.4 613 66.4
Rhsim12G0002100 Rhododendron simsii HOM05D005117 ORTHO05D005956 1.2e-229 800.0 688 60.6
FvH4_2g00430 Fragaria vesca HOM05D005117 ORTHO05D005956 5.1e-228 794.7 616 65.1
Actinidia23299 Actinidia chinensis HOM05D005117 ORTHO05D005956 6.7e-228 794.3 611 64.6
Migut.C01395 Erythranthe guttata HOM05D005117 ORTHO05D005956 7.4e-227 790.8 612 64.9
MBI06_g32153_MAGBIO Magnolia biondii HOM05D005117 ORTHO05D005956 7.4e-227 790.8 617 64.2
CAN.G75.10 Capsicum annuum HOM05D005117 ORTHO05D005956 1.6e-226 789.6 612 65.5
Sc06g0000080 Simmondsia chinensis HOM05D005117 ORTHO05D005956 1.6e-226 789.6 617 66.1
Aqoxy5G01861 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 2.1e-226 789.3 613 65.1
PGR004G2811 Punica granatum HOM05D005117 ORTHO05D005956 3.7e-226 788.5 614 64.7
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 3.1e-225 785.4 612 64.7
EL10Ac1g01281 Beta vulgaris HOM05D005117 ORTHO05D005956 5.9e-224 781.2 609 64.4
Eucgr.A01322 Eucalyptus grandis HOM05D005117 ORTHO05D005956 1.7e-223 779.6 561 68.6
PSO017G2614 Papaver somniferum HOM05D005117 ORTHO05D005956 3.2e-222 775.4 618 63.3
PSO170G3068 Papaver somniferum HOM05D005117 ORTHO05D005956 7.2e-222 774.2 618 63.1
SalBow7G0613 Salvia bowleyana HOM05D005117 ORTHO05D005956 2.1e-221 772.7 595 65.4
HanXRQChr12g0369271 Helianthus annuus HOM05D005117 ORTHO05D005956 2.7e-221 772.3 608 65.0
Cc10_g16050 Coffea canephora HOM05D005117 ORTHO05D005956 2.3e-220 769.2 612 64.5
ECA247G0677 Erigeron canadensis HOM05D005117 ORTHO05D005956 6.7e-220 767.7 604 63.9
Peaxi162Scf00078g01021 Petunia axillaris HOM05D005117 ORTHO05D005956 3.3e-219 765.4 603 65.0
Glyma.09G001900 Glycine max HOM05D005117 ORTHO05D005956 3.7e-218 761.9 570 67.2
Sabra13G0082800 Salix brachista HOM05D005117 ORTHO05D005956 4.8e-218 761.5 738 55.8
Os02g0557600 Oryza sativa ssp. japonica HOM05D005117 ORTHO05D005956 8.2e-218 760.8 611 62.8
Hund26940 Selenicereus undatus HOM05D005117 ORTHO05D005956 1.4e-217 760.0 603 64.2
ATR1089G036 Amborella trichopoda HOM05D005117 ORTHO05D005956 1.5e-211 740.0 607 62.4
HPP92_019136 Vanilla planifolia HOM05D005117 ORTHO05D005956 2.2e-210 736.1 615 61.1
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 2.8e-210 735.7 590 63.4
HPP92_019134 Vanilla planifolia HOM05D005117 ORTHO05D005956 3.7e-210 735.3 615 60.7
Duzib093G1290 Durio zibethinus HOM05D005117 ORTHO05D005956 6.9e-209 731.1 577 66.4
MELO3C008099.2 Cucumis melo HOM05D005117 ORTHO05D005956 2.6e-208 729.2 554 66.1
Ah.05g170440 Amaranthus hybridus HOM05D005117 ORTHO05D005956 8.5e-207 724.2 616 60.9
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 1.1e-206 723.8 563 65.5
Zm00001eb243900 Zea mays HOM05D005117 ORTHO05D005956 7.9e-205 717.6 608 59.7
Glyma.12G241600 Glycine max HOM05D005117 ORTHO05D005956 1.4e-204 716.8 549 66.7
CDE05G1166 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 1.1e-190 670.6 609 57.3
SMO364G0365 Selaginella moellendorffii HOM05D005117 ORTHO05D005956 2.8e-186 656.0 617 54.9
Prupe.8G004200 Prunus persica HOM05D005117 ORTHO05D005956 7.7e-184 647.9 502 65.3
Aqoxy5G01859 Aquilegia oxysepala HOM05D005117 ORTHO05D005956 1.5e-179 633.6 614 54.9
unitig_37.g13073 Utricularia gibba HOM05D005117 ORTHO05D005956 2.7e-168 596.3 623 53.1
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 5.6e-166 588.6 683 46.4
vmacro00946 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 6.8e-164 581.6 687 49.2
SEGI_03298 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 4.1e-161 572.4 526 56.5
vmacro00947 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 1.2e-149 534.3 488 58.4
AagrBONN_evm.TU.Sc2ySwM_340.48 Anthoceros agrestis HOM05D005117 ORTHO05D005956 4.4e-147 525.8 504 54.0
Atru.chr13.2570 Acer truncatum HOM05D005117 ORTHO05D005956 1.5e-142 510.8 395 65.6
Hma1.2p1_0016F.1_g010930 Hydrangea macrophylla HOM05D005117 ORTHO05D005956 2.1e-141 506.9 358 69.0
RcHm_v2.0_Chr6g0249701 Rosa chinensis HOM05D005117 ORTHO05D005956 7.1e-137 491.9 375 64.5
TAR381G0825 Trochodendron aralioides HOM05D005117 ORTHO05D005956 4.0e-124 449.5 363 63.6
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 4.6e-120 436.0 430 54.9
Haze_13981 Corylus avellana HOM05D005117 ORTHO05D005956 1.9e-113 414.1 364 61.3
RcHm_v2.0_Chr6g0250211 Rosa chinensis HOM05D005117 ORTHO05D005956 1.0e-106 391.7 382 55.5
Cre06.g303650 Chlamydomonas reinhardtii HOM05D005117 ORTHO05D005956 5.0e-106 389.4 640 38.3
Ca_30189_v3 Cicer arietinum L. HOM05D005117 ORTHO05D005956 4.6e-104 382.9 257 72.0
Haze_13982 Corylus avellana HOM05D005117 ORTHO05D005956 1.8e-103 380.9 257 73.2
SGA_v2.0_scaffold443G51687 Striga asiatica HOM05D005117 ORTHO05D005956 1.0e-98 365.2 320 59.4
Atru.chr13.2543 Acer truncatum HOM05D005117 ORTHO05D005956 1.2e-96 358.2 244 72.1
vmacro00948 Vaccinium macrocarpon HOM05D005117 ORTHO05D005956 7.4e-94 349.0 256 66.8
PGSC0003DMG402019061 Solanum tuberosum HOM05D005117 ORTHO05D005956 1.8e-87 327.8 231 69.3
MCO13G430 Micromonas commoda HOM05D005117 ORTHO05D005956 3.3e-86 323.6 622 35.2
Atru.chr13.2569 Acer truncatum HOM05D005117 ORTHO05D005956 2.0e-75 287.7 179 74.9
RcHm_v2.0_Chr6g0249901 Rosa chinensis HOM05D005117 ORTHO05D005956 1.0e-58 232.3 218 57.8
RcHm_v2.0_Chr6g0250191 Rosa chinensis HOM05D005117 ORTHO05D005956 6.8e-55 219.5 225 55.1
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 2.0e-46 191.4 178 53.9
Zm00001eb084470 Zea mays HOM05D005117 ORTHO05D005956 1.4e-44 185.3 158 59.5
RcHm_v2.0_Chr6g0250001 Rosa chinensis HOM05D005117 ORTHO05D005956 4.3e-41 173.7 109 77.1
FAN24G1044 Fragaria x ananassa HOM05D005117 ORTHO05D005956 9.5e-41 172.6 111 70.3
RcHm_v2.0_Chr6g0250151 Rosa chinensis HOM05D005117 ORTHO05D005956 9.5e-41 172.6 104 80.8
RcHm_v2.0_Chr6g0249891 Rosa chinensis HOM05D005117 ORTHO05D005956 6.8e-39 166.4 111 69.4
AUR62038541 Chenopodium quinoa HOM05D005117 ORTHO05D005956 8.9e-39 166.0 110 70.0
RcHm_v2.0_Chr6g0250171 Rosa chinensis HOM05D005117 ORTHO05D005956 4.9e-37 160.2 111 65.8
SHI04054 Sapria himalayana HOM05D005117 ORTHO05D005956 6.6e-34 149.8 104 70.2
RcHm_v2.0_Chr6g0249251 Rosa chinensis HOM05D005117 ORTHO05D005956 1.1e-31 142.5 120 60.8
RcHm_v2.0_Chr6g0249861 Rosa chinensis HOM05D005117 ORTHO05D005956 4.4e-30 137.1 138 56.5
A06p32710 Brassica napus HOM05D005117 ORTHO05D005956 9.9e-30 136.0 81 82.7
BraA06t26200Z Brassica rapa HOM05D005117 ORTHO05D005956 9.9e-30 136.0 81 82.7
RcHm_v2.0_Chr6g0249761 Rosa chinensis HOM05D005117 ORTHO05D005956 1.1e-28 132.5 87 74.7
FAN27G2074 Fragaria x ananassa HOM05D005117 ORTHO05D005956 1.2e-27 129.0 82 75.6
RcHm_v2.0_Chr6g0250321 Rosa chinensis HOM05D005117 ORTHO05D005956 1.6e-27 128.6 99 59.6
Cfa026610 Carpinus fangiana HOM05D005117 ORTHO05D005956 2.3e-26 124.8 505 25.0
RcHm_v2.0_Chr6g0249991 Rosa chinensis HOM05D005117 ORTHO05D005956 1.6e-24 118.6 120 55.0
RcHm_v2.0_Chr6g0249911 Rosa chinensis HOM05D005117 ORTHO05D005956 3.1e-23 114.4 72 77.8
RcHm_v2.0_Chr6g0250221 Rosa chinensis HOM05D005117 ORTHO05D005956 4.9e-21 107.1 66 75.8
RcHm_v2.0_Chr6g0249981 Rosa chinensis HOM05D005117 ORTHO05D005956 1.1e-20 105.9 68 69.1
AagrBONN_evm.TU.Sc2ySwM_340.40 Anthoceros agrestis HOM05D005117 ORTHO05D005956 4.2e-20 104.0 100 52.0
Rhsim03G0007800 Rhododendron simsii HOM05D000003 ORTHO05D005956 1.6e-19 102.1 134 44.8
RcHm_v2.0_Chr6g0249871 Rosa chinensis HOM05D005117 ORTHO05D005956 2.5e-17 94.7 55 74.5
RcHm_v2.0_Chr6g0249791 Rosa chinensis HOM05D005117 ORTHO05D005956 8.4e-13 79.7 55 69.1
CDE05G1587 Ceratophyllum demersum HOM05D005117 ORTHO05D005956 2.1e-11 75.1 142 39.4
RcHm_v2.0_Chr6g0249851 Rosa chinensis HOM05D005117 ORTHO05D005956 7.9e-11 73.2 41 75.6
Sed0012379 Sechium edule HOM05D005943 ORTHO05D007328 8.7e-10 69.7 182 27.5
Sed0027178 Sechium edule HOM05D005943 ORTHO05D007328 8.7e-10 69.7 182 26.9
Cpa.g.sc48.107 Carica papaya HOM05D005943 ORTHO05D007328 1.5e-09 68.9 182 26.9
Rhsim09G0011400 Rhododendron simsii HOM05D005117 ORTHO05D005956 1.5e-09 68.9 50 64.0
SHI49642 Sapria himalayana HOM05D005117 ORTHO05D005956 2.5e-09 68.2 41 75.6
RcHm_v2.0_Chr6g0249241 Rosa chinensis HOM05D005117 ORTHO05D005956 5.6e-09 67.0 40 72.5
Cc10_g13530 Coffea canephora HOM05D005117 ORTHO05D005956 7.4e-09 66.6 41 73.2
SEGI_33948 Sequoiadendron giganteum HOM05D005117 ORTHO05D005956 1.5e-06 58.9 84 41.7
RcHm_v2.0_Chr6g0249261 Rosa chinensis HOM05D005117 ORTHO05D005956 2.6e-06 58.2 32 81.2
BolC5t30574H Brassica oleracea HOM05D002136 ORTHO05D005956 7.6e-06 56.6 38 68.4


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