Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G14540 Aethionema arabicum HOM05D004188 ORTHO05D004445 1.3e-62 243.4 181 100.0
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 3.9e-38 162.2 185 60.0
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 8.6e-38 161.0 184 63.6
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 8.6e-38 161.0 184 63.6
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 8.6e-38 161.0 184 63.6
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 1.9e-37 159.8 185 65.4
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 1.2e-36 157.1 184 63.6
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 1.3e-30 137.1 183 66.1
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 3.3e-29 132.5 187 71.7
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 9.5e-29 131.0 178 63.5
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 1.6e-28 130.2 188 69.7
THA.LOC104810856 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 1.6e-20 103.6 184 63.0
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 3.4e-18 95.9 71 69.0
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 6.8e-11 71.6 65 56.9
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.0e-10 70.1 180 40.0
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.0e-10 70.1 182 41.8
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 2.0e-10 70.1 184 45.7
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.6e-10 69.7 182 41.8
BcaB01g04664 Brassica carinata HOM05D004188 ORTHO05D004445 3.4e-10 69.3 178 37.1
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 1.3e-09 67.4 51 64.7
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 1.7e-09 67.0 50 64.0
BcaB08g36360 Brassica carinata HOM05D004188 ORTHO05D004445 2.9e-09 66.2 68 51.5
A03p11070 Brassica napus HOM05D004188 ORTHO05D004445 2.9e-09 66.2 68 54.4
BraA03t10421Z Brassica rapa HOM05D004188 ORTHO05D004445 2.9e-09 66.2 68 54.4
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 2.9e-09 66.2 64 53.1
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 2.9e-09 66.2 53 62.3
BraA10t43861Z Brassica rapa HOM05D004188 ORTHO05D004445 4.9e-09 65.5 68 50.0
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 4.9e-09 65.5 50 64.0
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 4.9e-09 65.5 50 64.0
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 6.4e-09 65.1 181 38.1
A10p17820 Brassica napus HOM05D004188 ORTHO05D004445 8.4e-09 64.7 68 50.0
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 8.4e-09 64.7 50 62.0
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 8.4e-09 64.7 66 48.5
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 8.4e-09 64.7 59 55.9
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 8.4e-09 64.7 45 68.9
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 8.4e-09 64.7 67 52.2
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.1e-08 64.3 51 56.9
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.1e-08 64.3 178 35.4
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 1.1e-08 64.3 48 62.5
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 1.1e-08 64.3 64 48.4
BcaC05g28877 Brassica carinata HOM05D026499 ORTHO05D027731 1.9e-08 63.5 136 47.1
C03p12760 Brassica napus HOM05D004188 ORTHO05D004445 1.9e-08 63.5 68 51.5
C05p50000 Brassica napus HOM05D026499 ORTHO05D027731 1.9e-08 63.5 136 47.1
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.9e-08 63.5 67 50.7
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 3.2e-08 62.8 51 54.9
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 3.2e-08 62.8 63 52.4
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 3.2e-08 62.8 63 50.8
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 3.2e-08 62.8 71 52.1
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 4.2e-08 62.4 62 51.6
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 4.2e-08 62.4 53 58.5
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 5.4e-08 62.0 62 46.8
Thhalv10015987m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 5.4e-08 62.0 136 38.2
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 5.4e-08 62.0 63 52.4
ECA248G2476 Erigeron canadensis HOM05D004188 ORTHO05D004445 7.1e-08 61.6 54 57.4
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 7.1e-08 61.6 56 57.1
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 9.3e-08 61.2 68 55.9
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 1.6e-07 60.5 52 51.9
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 2.1e-07 60.1 67 49.3
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 2.7e-07 59.7 55 56.4
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 2.7e-07 59.7 60 51.7
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 3.5e-07 59.3 67 44.8
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 3.5e-07 59.3 45 64.4
Atru.chr3.3633 Acer truncatum HOM05D004188 ORTHO05D004445 4.6e-07 58.9 66 50.0
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 4.6e-07 58.9 63 44.4
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 6.0e-07 58.5 47 61.7
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 6.0e-07 58.5 62 45.2
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 7.8e-07 58.2 61 50.8
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 7.8e-07 58.2 67 52.2
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 7.8e-07 58.2 67 47.8
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 1.0e-06 57.8 45 64.4
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 1.0e-06 57.8 45 64.4
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 1.0e-06 57.8 51 54.9
Rhsim13G0094200 Rhododendron simsii HOM05D004188 ORTHO05D004445 1.0e-06 57.8 53 52.8
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 1.0e-06 57.8 63 42.9
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 1.3e-06 57.4 178 39.3
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 1.3e-06 57.4 60 51.7
TWI31G0432 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 1.3e-06 57.4 68 51.5
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 1.7e-06 57.0 56 55.4
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.7e-06 57.0 45 60.0
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 1.7e-06 57.0 183 37.2
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 2.3e-06 56.6 56 51.8
Migut.D02222 Erythranthe guttata HOM05D004188 ORTHO05D004445 2.3e-06 56.6 59 49.2
Migut.D02278 Erythranthe guttata HOM05D004188 ORTHO05D004445 2.3e-06 56.6 59 49.2
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 2.3e-06 56.6 61 50.8
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 2.3e-06 56.6 47 55.3
Sp6g22190 Schrenkiella parvula HOM05D004188 ORTHO05D004445 2.3e-06 56.6 48 58.3
AL8G37220 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 3.0e-06 56.2 64 43.8
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea HOM05D004188 ORTHO05D004445 3.0e-06 56.2 48 56.2
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 3.0e-06 56.2 45 60.0
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 3.0e-06 56.2 67 50.7
Nitab4.5_0012712g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 3.0e-06 56.2 171 46.2
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 5.1e-06 55.5 60 50.0
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 6.6e-06 55.1 161 40.4
Solyc11g069390.1 Solanum lycopersicum HOM05D004188 ORTHO05D004445 8.7e-06 54.7 59 44.1


User provided reference genes

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