Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G12450 Aethionema arabicum HOM05D001317 ORTHO05D001164 6.7e-35 150.2 80 100.0
Aa31sc27G60 Aethionema arabicum HOM05D001317 ORTHO05D001164 5.7e-34 147.1 80 97.5
Aa31sc95G80 Aethionema arabicum HOM05D001317 ORTHO05D058661 2.4e-32 141.7 80 95.0
BolC5t31527H Brassica oleracea HOM05D001317 ORTHO05D001164 7.0e-08 60.5 88 46.6
Aa31LG3G2480 Aethionema arabicum HOM05D001317 ORTHO05D001164 9.1e-08 60.1 88 46.6
C05p28000 Brassica napus HOM05D001317 ORTHO05D001164 1.2e-07 59.7 47 70.2
Sp3g08320 Schrenkiella parvula HOM05D001317 ORTHO05D001164 1.2e-07 59.7 88 46.6
AT3G09980 Arabidopsis thaliana HOM05D001317 ORTHO05D001164 1.6e-07 59.3 88 46.6
A05p39040 Brassica napus HOM05D001317 ORTHO05D001164 1.6e-07 59.3 88 46.6
Carub.0003s0908 Capsella rubella HOM05D001317 ORTHO05D001164 1.6e-07 59.3 88 46.6
BcaC05g26952 Brassica carinata HOM05D001317 ORTHO05D001164 2.0e-07 58.9 88 45.5
THA.LOC104823227 Tarenaya hassleriana HOM05D001317 ORTHO05D001164 5.9e-07 57.4 88 44.3
AL3G21270 Arabidopsis lyrata HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
BcaC05g29725 Brassica carinata HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
C05p58060 Brassica napus HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
BolC5t34463H Brassica oleracea HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
BraA05t22696Z Brassica rapa HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
CARHR084490 Cardamine hirsuta HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
Migut.J00976 Erythranthe guttata HOM05D001317 ORTHO05D001164 7.7e-07 57.0 88 42.0
Thhalv10021627m.g Eutrema salsugineum HOM05D001317 ORTHO05D001164 7.7e-07 57.0 46 69.6
BcaB03g11579 Brassica carinata HOM05D001317 ORTHO05D001164 1.3e-06 56.2 46 69.6
Oeu018723.1 Olea europaea HOM05D001317 ORTHO05D001164 1.3e-06 56.2 50 60.0
BcaB06g28938 Brassica carinata HOM05D001317 ORTHO05D001164 1.7e-06 55.8 88 42.0
BraA04t18283Z Brassica rapa HOM05D001317 ORTHO05D001164 1.7e-06 55.8 88 43.2
Cpa.g.sc5.64 Carica papaya HOM05D001317 ORTHO05D001164 1.7e-06 55.8 88 42.0
Potri.006G115400 Populus trichocarpa HOM05D001317 ORTHO05D001164 1.7e-06 55.8 88 43.2
THA.LOC104823463 Tarenaya hassleriana HOM05D001317 ORTHO05D001164 1.7e-06 55.8 88 42.0
ECA248G0645 Erigeron canadensis HOM05D001317 ORTHO05D001164 2.2e-06 55.5 73 46.6
HanXRQChr11g0351201 Helianthus annuus HOM05D001317 ORTHO05D001164 2.2e-06 55.5 73 46.6
Hma1.2p1_0646F.1_g194990 Hydrangea macrophylla HOM05D001317 ORTHO05D001164 2.2e-06 55.5 88 40.9
THA.LOC104826930 Tarenaya hassleriana HOM05D001317 ORTHO05D001164 2.2e-06 55.5 46 67.4
unitig_26.g9246 Utricularia gibba HOM05D001317 ORTHO05D001164 2.2e-06 55.5 50 56.0
unitig_749.g14290 Utricularia gibba HOM05D001317 ORTHO05D001164 2.2e-06 55.5 50 56.0
Aa31LG1G21570 Aethionema arabicum HOM05D001317 ORTHO05D001164 2.9e-06 55.1 88 42.0
BcaC01g04255 Brassica carinata HOM05D001317 ORTHO05D001164 2.9e-06 55.1 46 67.4
BcaC02g07595 Brassica carinata HOM05D001317 ORTHO05D001164 2.9e-06 55.1 88 40.9
BcaC02g07596 Brassica carinata HOM05D001317 ORTHO05D001164 2.9e-06 55.1 88 40.9
A03p35740 Brassica napus HOM05D001317 ORTHO05D001164 2.9e-06 55.1 46 67.4
A05p18350 Brassica napus HOM05D001317 ORTHO05D001164 2.9e-06 55.1 46 67.4
A09p21500 Brassica napus HOM05D001317 ORTHO05D001164 2.9e-06 55.1 67 52.2
A09p68960 Brassica napus HOM05D001317 ORTHO05D001164 2.9e-06 55.1 46 67.4
C03p43410 Brassica napus HOM05D001317 ORTHO05D001164 2.9e-06 55.1 46 67.4
BolC4t28023H Brassica oleracea HOM05D001317 ORTHO05D001164 2.9e-06 55.1 88 40.9
BraA03t12748Z Brassica rapa HOM05D001317 ORTHO05D001164 2.9e-06 55.1 46 67.4
BraA09t37749Z Brassica rapa HOM05D001317 ORTHO05D001164 2.9e-06 55.1 67 52.2
HanXRQChr12g0380951 Helianthus annuus HOM05D001317 ORTHO05D001164 2.9e-06 55.1 73 46.6
Oeu052893.1 Olea europaea HOM05D001317 ORTHO05D001164 2.9e-06 55.1 50 60.0
BolC3t16612H Brassica oleracea HOM05D001317 ORTHO05D001164 5.0e-06 54.3 88 43.2
Dinv19840 Davidia involucrata HOM05D001317 ORTHO05D001164 5.0e-06 54.3 67 47.8
Nitab4.5_0000963g0040 Nicotiana tabacum HOM05D001317 ORTHO05D001164 5.0e-06 54.3 73 45.2
Rhsim04G0134900 Rhododendron simsii HOM05D001317 ORTHO05D001164 5.0e-06 54.3 88 39.8
RhsimUnG0042300 Rhododendron simsii HOM05D001317 ORTHO05D001164 5.0e-06 54.3 88 39.8
Atru.chr8.1614 Acer truncatum HOM05D001317 ORTHO05D001164 6.5e-06 53.9 73 49.3
BcaC08g44609 Brassica carinata HOM05D001317 ORTHO05D001164 6.5e-06 53.9 88 39.8
A01p18860 Brassica napus HOM05D001176 ORTHO05D003317 6.5e-06 53.9 46 67.4
C06p20800 Brassica napus HOM05D001317 ORTHO05D001164 6.5e-06 53.9 88 39.8
BolC6t37265H Brassica oleracea HOM05D001317 ORTHO05D001164 6.5e-06 53.9 88 39.8
BraA01t01829Z Brassica rapa HOM05D001176 ORTHO05D003317 6.5e-06 53.9 46 67.4
Rhsim03G0079200 Rhododendron simsii HOM05D001317 ORTHO05D001164 6.5e-06 53.9 73 45.2
TWI77G0148 Tripterygium wilfordii HOM05D001317 ORTHO05D001164 6.5e-06 53.9 46 63.0
vmacro07381 Vaccinium macrocarpon HOM05D001317 ORTHO05D001164 6.5e-06 53.9 73 45.2
BcaB06g28937 Brassica carinata HOM05D001317 ORTHO05D001164 8.5e-06 53.5 50 58.0
BcaC02g07599 Brassica carinata HOM05D001317 ORTHO05D001164 8.5e-06 53.5 50 58.0
A04p27920 Brassica napus HOM05D001317 ORTHO05D001164 8.5e-06 53.5 50 58.0
BolC4t28022H Brassica oleracea HOM05D001317 ORTHO05D001164 8.5e-06 53.5 50 58.0
BraA01t01464Z Brassica rapa HOM05D000640 ORTHO05D004274 8.5e-06 53.5 46 65.2
CARHR209640 Cardamine hirsuta HOM05D001317 ORTHO05D001164 8.5e-06 53.5 88 42.0
DCAR_013368 Daucus carota HOM05D001317 ORTHO05D001164 8.5e-06 53.5 46 60.9
Manes.08G022200 Manihot esculenta HOM05D001317 ORTHO05D001164 8.5e-06 53.5 88 40.9
Rhsim03G0079800 Rhododendron simsii HOM05D001317 ORTHO05D001164 8.5e-06 53.5 46 60.9
Solyc10g083520.2 Solanum lycopersicum HOM05D001317 ORTHO05D001164 8.5e-06 53.5 46 63.0
Sopen10g032990 Solanum pennellii HOM05D001317 ORTHO05D001164 8.5e-06 53.5 46 63.0
TWI53G1386 Tripterygium wilfordii HOM05D001317 ORTHO05D001164 8.5e-06 53.5 50 58.0


User provided reference genes

Program Settings