Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G11890 Aethionema arabicum HOM05D012300 ORTHO05D014330 7.2e-110 400.6 203 100.0
BolC2t08539H Brassica oleracea HOM05D012300 ORTHO05D014330 2.1e-37 159.8 192 53.1
Sp5g23280 Schrenkiella parvula HOM05D012300 ORTHO05D014330 5.8e-35 151.8 190 52.6
BcaB05g24359 Brassica carinata HOM05D012300 ORTHO05D014330 2.9e-34 149.4 197 47.2
C02p24290 Brassica napus HOM05D012300 ORTHO05D014330 2.9e-34 149.4 215 47.9
A02p14850 Brassica napus HOM05D012300 ORTHO05D014330 3.8e-34 149.1 219 48.4
BraA02t06552Z Brassica rapa HOM05D012300 ORTHO05D014330 3.8e-34 149.1 219 48.4
BcaC03g14934 Brassica carinata HOM05D012300 ORTHO05D014330 6.5e-34 148.3 216 47.7
Thhalv10019164m.g Eutrema salsugineum HOM05D012300 ORTHO05D014330 9.3e-33 144.4 187 51.9
CARHR060940 Cardamine hirsuta HOM05D012300 ORTHO05D014330 3.5e-32 142.5 190 50.0
AL2G27090 Arabidopsis lyrata HOM05D012300 ORTHO05D014330 5.0e-26 122.1 193 46.6
Carub.0002s1474 Capsella rubella HOM05D012300 ORTHO05D014330 3.2e-25 119.4 180 44.4
AT1G68240 Arabidopsis thaliana HOM05D012300 ORTHO05D014330 7.2e-25 118.2 181 47.0
Thhalv10019637m.g Eutrema salsugineum HOM05D012300 ORTHO05D014330 2.9e-10 69.7 183 32.8
Gohir.D11G110400 Gossypium hirsutum HOM05D000627 ORTHO05D000365 4.7e-08 62.4 120 31.7
Gorai.007G118100 Gossypium raimondii HOM05D000627 ORTHO05D000365 4.7e-08 62.4 120 31.7
Eucgr.B01825 Eucalyptus grandis HOM05D000627 ORTHO05D000365 1.4e-07 60.8 90 40.0
Gohir.A11G105500 Gossypium hirsutum HOM05D000627 ORTHO05D000365 1.4e-07 60.8 112 33.0
BcaNung01363 Brassica carinata HOM05D000627 ORTHO05D000365 3.0e-07 59.7 163 28.2
Aa31LG1G5530 Aethionema arabicum HOM05D000627 ORTHO05D000365 3.9e-07 59.3 126 33.3
AT2G46970 Arabidopsis thaliana HOM05D000627 ORTHO05D011138 3.9e-07 59.3 133 33.1
BcaC09g51659 Brassica carinata HOM05D000627 ORTHO05D000365 3.9e-07 59.3 123 34.1
Lalb_Chr01g0019351 Lupinus albus HOM05D000627 ORTHO05D000365 3.9e-07 59.3 99 36.4
SalBow4G2758 Salvia bowleyana HOM05D000627 ORTHO05D000365 3.9e-07 59.3 67 44.8
A01p09100 Brassica napus HOM05D000627 ORTHO05D000365 5.1e-07 58.9 107 36.4
HPP92_011019 Vanilla planifolia HOM05D000627 ORTHO05D000365 5.1e-07 58.9 131 32.8
Sp3g33420 Schrenkiella parvula HOM05D000627 ORTHO05D000365 6.7e-07 58.5 96 38.5
BcaC09g51662 Brassica carinata HOM05D000627 ORTHO05D000365 8.8e-07 58.2 74 43.2
C01p10710 Brassica napus HOM05D000627 ORTHO05D000365 8.8e-07 58.2 74 43.2
Os05g0139100 Oryza sativa ssp. japonica HOM05D000627 ORTHO05D000365 8.8e-07 58.2 70 45.7
THA.LOC104820055 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 8.8e-07 58.2 78 42.3
ECA247G1435 Erigeron canadensis HOM05D000627 ORTHO05D000365 1.1e-06 57.8 65 44.6
Sed0026237 Sechium edule HOM05D000627 ORTHO05D000365 1.1e-06 57.8 87 37.9
CARHR236600 Cardamine hirsuta HOM05D000627 ORTHO05D000365 1.5e-06 57.4 135 29.6
Migut.D00504 Erythranthe guttata HOM05D000627 ORTHO05D000365 1.5e-06 57.4 83 41.0
Os01g0286100 Oryza sativa ssp. japonica HOM05D000627 ORTHO05D000365 1.5e-06 57.4 102 37.3
AL1G20050 Arabidopsis lyrata HOM05D000627 ORTHO05D000365 2.0e-06 57.0 87 43.7
Carub.0003s3448 Capsella rubella HOM05D000627 ORTHO05D000365 2.0e-06 57.0 82 42.7
AUR62001913 Chenopodium quinoa HOM05D000627 ORTHO05D000365 2.0e-06 57.0 101 40.6
Sp7g26810 Schrenkiella parvula HOM05D000627 ORTHO05D000365 2.0e-06 57.0 117 34.2
Aqoxy2G02438 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 2.6e-06 56.6 133 32.3
BcaB03g16810 Brassica carinata HOM05D000627 ORTHO05D000365 2.6e-06 56.6 96 37.5
BcaC09g51660 Brassica carinata HOM05D000627 ORTHO05D000365 2.6e-06 56.6 81 39.5
Duzib093G1045 Durio zibethinus HOM05D000627 ORTHO05D000365 2.6e-06 56.6 63 46.0
Lalb_Chr25g0289661 Lupinus albus HOM05D000627 ORTHO05D000365 2.6e-06 56.6 99 35.4
MD05G1182300 Malus domestica HOM05D000627 ORTHO05D000365 2.6e-06 56.6 64 45.3
QL03p011172 Quercus lobata HOM05D000627 ORTHO05D000365 2.6e-06 56.6 129 33.3
TPR.G1653 Trifolium pratense HOM05D000627 ORTHO05D000365 2.6e-06 56.6 117 32.5
Zm00001eb332400 Zea mays HOM05D000627 ORTHO05D000365 2.6e-06 56.6 72 44.4
Zm00001eb417610 Zea mays HOM05D000627 ORTHO05D000365 2.6e-06 56.6 107 39.3
AT2G20180 Arabidopsis thaliana HOM05D000627 ORTHO05D000365 3.3e-06 56.2 91 39.6
C01p10660 Brassica napus HOM05D000627 ORTHO05D000365 3.3e-06 56.2 77 40.3
Psat6g064800 Pisum sativum HOM05D000627 ORTHO05D000365 3.3e-06 56.2 83 42.2
ATR0796G291 Amborella trichopoda HOM05D000627 ORTHO05D000365 4.4e-06 55.8 89 36.0
AL7G23690 Arabidopsis lyrata HOM05D000627 ORTHO05D000365 4.4e-06 55.8 84 38.1
Carub.0007s1184 Capsella rubella HOM05D000627 ORTHO05D000365 4.4e-06 55.8 126 33.3
CARHR110680 Cardamine hirsuta HOM05D000627 ORTHO05D000365 4.4e-06 55.8 63 47.6
CDE01G0138 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 4.4e-06 55.8 63 44.4
Thhalv10001974m.g Eutrema salsugineum HOM05D000627 ORTHO05D000365 4.4e-06 55.8 98 37.8
Glyma.13G130100 Glycine max HOM05D000627 ORTHO05D000365 4.4e-06 55.8 82 40.2
Lsat_1_v5_gn_9_11161 Lactuca sativa HOM05D000627 ORTHO05D000365 4.4e-06 55.8 73 41.1
Lalb_Chr18g0046241 Lupinus albus HOM05D000627 ORTHO05D000365 4.4e-06 55.8 74 44.6
Thecc.01G326400 Theobroma cacao HOM05D000627 ORTHO05D000365 4.4e-06 55.8 82 40.2
Aa31LG8G17110 Aethionema arabicum HOM05D000627 ORTHO05D000365 5.7e-06 55.5 62 48.4
A09p65460 Brassica napus HOM05D000627 ORTHO05D000365 5.7e-06 55.5 87 42.5
C07p01000 Brassica napus HOM05D000627 ORTHO05D000365 5.7e-06 55.5 96 37.5
BolC8t52480H Brassica oleracea HOM05D000627 ORTHO05D000365 5.7e-06 55.5 87 42.5
Ca_09623_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 5.7e-06 55.5 99 34.3
Eucgr.K03592 Eucalyptus grandis HOM05D000627 ORTHO05D000365 5.7e-06 55.5 63 44.4
vmacro21502 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 5.7e-06 55.5 79 40.5
AT1G09530 Arabidopsis thaliana HOM05D000627 ORTHO05D000365 7.4e-06 55.1 71 45.1
A01p09120 Brassica napus HOM05D000627 ORTHO05D000365 7.4e-06 55.1 126 33.3
A06p06220 Brassica napus HOM05D000627 ORTHO05D000365 7.4e-06 55.1 87 42.5
C08p49430 Brassica napus HOM05D000627 ORTHO05D000365 7.4e-06 55.1 87 42.5
BraA09t41891Z Brassica rapa HOM05D000627 ORTHO05D000365 7.4e-06 55.1 87 42.5
Carub.0001s0887 Capsella rubella HOM05D000627 ORTHO05D000365 7.4e-06 55.1 145 32.4
CAN.G941.44 Capsicum annuum HOM05D000627 ORTHO05D000365 7.4e-06 55.1 109 33.9
CARHR009500 Cardamine hirsuta HOM05D000627 ORTHO05D000365 7.4e-06 55.1 87 42.5
CDE02G3441 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 7.4e-06 55.1 81 40.7
Thhalv10007343m.g Eutrema salsugineum HOM05D000627 ORTHO05D000365 7.4e-06 55.1 87 42.5
Glyma.10G138800 Glycine max HOM05D000627 ORTHO05D000365 7.4e-06 55.1 98 36.7
Manes.09G181800 Manihot esculenta HOM05D000627 ORTHO05D000365 7.4e-06 55.1 149 30.2
Nitab4.5_0001511g0020 Nicotiana tabacum HOM05D000627 ORTHO05D000365 7.4e-06 55.1 123 34.1
Rhsim01G0258300 Rhododendron simsii HOM05D000627 ORTHO05D000365 7.4e-06 55.1 65 44.6
TAR633G0207 Trochodendron aralioides HOM05D000627 ORTHO05D000365 7.4e-06 55.1 89 37.1
Actinidia01660 Actinidia chinensis HOM05D000627 ORTHO05D000365 9.7e-06 54.7 63 46.0
arahy.Tifrunner.gnm1.ann1.IC82WL Arachis hypogaea HOM05D000627 ORTHO05D000365 9.7e-06 54.7 88 36.4
arahy.Tifrunner.gnm1.ann1.ILFA61 Arachis hypogaea HOM05D000627 ORTHO05D000365 9.7e-06 54.7 88 36.4
C05p07530 Brassica napus HOM05D000627 ORTHO05D000365 9.7e-06 54.7 80 42.5
BolC5t29507H Brassica oleracea HOM05D000627 ORTHO05D000365 9.7e-06 54.7 80 42.5
BolC7t40537H Brassica oleracea HOM05D000627 ORTHO05D000365 9.7e-06 54.7 82 41.5
Carub.0007s1183 Capsella rubella HOM05D000627 ORTHO05D000365 9.7e-06 54.7 137 29.9
Migut.B00888 Erythranthe guttata HOM05D000627 ORTHO05D000365 9.7e-06 54.7 88 37.5
Migut.N02248 Erythranthe guttata HOM05D000627 ORTHO05D000365 9.7e-06 54.7 83 38.6
FAN24G2094 Fragaria x ananassa HOM05D000627 ORTHO05D000365 9.7e-06 54.7 62 46.8
Lj1g0013455 Lotus japonicus HOM05D000627 ORTHO05D000365 9.7e-06 54.7 62 45.2
Os02g0805250 Oryza sativa ssp. japonica HOM05D000627 ORTHO05D000365 9.7e-06 54.7 80 41.2
VMungo1383G0894 Vigna mungo HOM05D000627 ORTHO05D000365 9.7e-06 54.7 73 42.5


User provided reference genes

Program Settings