Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G1090 Aethionema arabicum HOM05D000702 ORTHO05D058542 5.2e-60 234.2 119 100.0
Aa31LG4G1100 Aethionema arabicum HOM05D000702 ORTHO05D001396 1.7e-13 79.7 109 49.5
AL2G40560 Arabidopsis lyrata HOM05D000702 ORTHO05D001396 4.8e-13 78.2 113 46.9
AT1G80830 Arabidopsis thaliana HOM05D000702 ORTHO05D001396 4.1e-12 75.1 113 45.1
A07p26880 Brassica napus HOM05D000702 ORTHO05D001396 6.9e-12 74.3 113 43.4
BcaC08g45341 Brassica carinata HOM05D000702 ORTHO05D001396 9.1e-12 73.9 113 42.5
C06p29530 Brassica napus HOM05D000702 ORTHO05D001396 9.1e-12 73.9 113 42.5
BolC6t38121H Brassica oleracea HOM05D000702 ORTHO05D001396 9.1e-12 73.9 113 42.5
AL1G28120 Arabidopsis lyrata HOM05D000702 ORTHO05D001396 1.2e-11 73.6 110 44.5
BcaC03g15928 Brassica carinata HOM05D000702 ORTHO05D001396 1.5e-11 73.2 113 45.1
C02p36890 Brassica napus HOM05D000702 ORTHO05D001396 1.5e-11 73.2 113 45.1
BolC2t09702H Brassica oleracea HOM05D000702 ORTHO05D001396 1.5e-11 73.2 113 45.1
Carub.0002s2672 Capsella rubella HOM05D000702 ORTHO05D001396 1.5e-11 73.2 113 44.2
Sp5g34930 Schrenkiella parvula HOM05D000702 ORTHO05D001396 1.5e-11 73.2 113 43.4
BcaB05g25226 Brassica carinata HOM05D000702 ORTHO05D001396 2.6e-11 72.4 113 44.2
A02p23130 Brassica napus HOM05D000702 ORTHO05D001396 4.5e-11 71.6 113 44.2
BraA02t07311Z Brassica rapa HOM05D000702 ORTHO05D001396 4.5e-11 71.6 113 44.2
Thhalv10018389m.g Eutrema salsugineum HOM05D000702 ORTHO05D001396 4.5e-11 71.6 109 45.9
Cfa001883 Carpinus fangiana HOM05D000702 ORTHO05D001396 1.0e-10 70.5 81 49.4
AT1G15960 Arabidopsis thaliana HOM05D000702 ORTHO05D001396 1.3e-10 70.1 109 43.1
Rhsim08G0206400 Rhododendron simsii HOM05D000702 ORTHO05D001396 1.3e-10 70.1 77 49.4
Rhsim08G0206800 Rhododendron simsii HOM05D000702 ORTHO05D001396 1.3e-10 70.1 77 49.4
THA.LOC104812428 Tarenaya hassleriana HOM05D000702 ORTHO05D001396 1.7e-10 69.7 109 43.1
BcaB02g07246 Brassica carinata HOM05D000702 ORTHO05D001396 2.2e-10 69.3 113 42.5
BcaC08g47541 Brassica carinata HOM05D000702 ORTHO05D001396 2.2e-10 69.3 108 45.4
A07p44850 Brassica napus HOM05D000702 ORTHO05D001396 2.2e-10 69.3 108 45.4
C06p53660 Brassica napus HOM05D000702 ORTHO05D001396 2.2e-10 69.3 108 45.4
BraA07t31992Z Brassica rapa HOM05D000702 ORTHO05D001396 2.2e-10 69.3 108 45.4
Lj5A80T56 Lonicera japonica HOM05D000702 ORTHO05D001396 2.2e-10 69.3 77 50.6
BolC6t40383H Brassica oleracea HOM05D000702 ORTHO05D001396 2.9e-10 68.9 108 45.4
Haze_16663 Corylus avellana HOM05D000702 ORTHO05D001396 2.9e-10 68.9 81 48.1
BcaB02g08719 Brassica carinata HOM05D000702 ORTHO05D001396 3.8e-10 68.6 113 40.7
Carub.0001s1576 Capsella rubella HOM05D000702 ORTHO05D001396 6.5e-10 67.8 109 41.3
Cpa.g.sc10.85 Carica papaya HOM05D000702 ORTHO05D001396 6.5e-10 67.8 109 41.3
AL2G40270 Arabidopsis lyrata HOM05D000702 ORTHO05D001396 8.5e-10 67.4 113 40.7
Hund06522 Selenicereus undatus HOM05D000702 ORTHO05D001396 1.4e-09 66.6 113 38.9
AUR62026994 Chenopodium quinoa HOM05D000702 ORTHO05D001396 2.5e-09 65.9 113 39.8
Sc12g0008400 Simmondsia chinensis HOM05D000702 ORTHO05D001396 3.2e-09 65.5 110 39.1
AL3G43530 Arabidopsis lyrata HOM05D000702 ORTHO05D001396 4.2e-09 65.1 113 39.8
BcaC05g25615 Brassica carinata HOM05D000702 ORTHO05D001396 4.2e-09 65.1 105 41.0
A06p11980 Brassica napus HOM05D000702 ORTHO05D001396 4.2e-09 65.1 109 39.4
C05p14180 Brassica napus HOM05D000702 ORTHO05D001396 4.2e-09 65.1 105 41.0
BolC5t30149H Brassica oleracea HOM05D000702 ORTHO05D001396 4.2e-09 65.1 105 41.0
BraA06t24369Z Brassica rapa HOM05D000702 ORTHO05D001396 4.2e-09 65.1 109 39.4
Hund00437 Selenicereus undatus HOM05D000702 ORTHO05D001396 4.2e-09 65.1 113 38.9
BcaB02g06648 Brassica carinata HOM05D000702 ORTHO05D001396 5.5e-09 64.7 105 40.0
Sp1g14270 Schrenkiella parvula HOM05D000702 ORTHO05D001396 5.5e-09 64.7 105 41.0
Hma1.2p1_0109F.1_g052500 Hydrangea macrophylla HOM05D000702 ORTHO05D001396 7.2e-09 64.3 113 37.2
Aa31LG7G540 Aethionema arabicum HOM05D000702 ORTHO05D001396 9.4e-09 63.9 105 41.9
CiPaw.01G254300 Carya illinoinensis HOM05D000702 ORTHO05D001396 1.2e-08 63.5 110 37.3
AUR62030834 Chenopodium quinoa HOM05D000702 ORTHO05D001396 2.1e-08 62.8 113 38.9
Glyma.13G369900 Glycine max HOM05D000702 ORTHO05D001396 2.7e-08 62.4 110 35.5
Thhalv10009815m.g Eutrema salsugineum HOM05D000702 ORTHO05D001396 3.6e-08 62.0 105 40.0
ATR1098G063 Amborella trichopoda HOM05D000702 ORTHO05D001396 6.1e-08 61.2 81 42.0
GSVIVG01034237001 Vitis vinifera HOM05D000702 ORTHO05D001396 6.1e-08 61.2 109 36.7
ClCG10G012960 Citrullus lanatus HOM05D000702 ORTHO05D001396 7.9e-08 60.8 78 44.9
Rhsim08G0206300 Rhododendron simsii HOM05D000702 ORTHO05D001396 7.9e-08 60.8 109 36.7
Rhsim08G0206700 Rhododendron simsii HOM05D000702 ORTHO05D001396 7.9e-08 60.8 109 36.7
Duzib192G0942 Durio zibethinus HOM05D000702 ORTHO05D001396 1.0e-07 60.5 109 37.6
Glyma.15G003500 Glycine max HOM05D000702 ORTHO05D001396 1.0e-07 60.5 109 34.9
Ah.01g024680 Amaranthus hybridus HOM05D000702 ORTHO05D001396 1.4e-07 60.1 113 35.4
CDE02G3204 Ceratophyllum demersum HOM05D000702 ORTHO05D001396 2.3e-07 59.3 110 33.6
Phvul.010G160800 Phaseolus vulgaris HOM05D000702 ORTHO05D001396 2.3e-07 59.3 113 34.5
Prupe.3G097800 Prunus persica HOM05D000702 ORTHO05D001396 2.3e-07 59.3 109 34.9
TAR626G1023 Trochodendron aralioides HOM05D000702 ORTHO05D001396 2.3e-07 59.3 113 31.9
Glyma.08G218200 Glycine max HOM05D000702 ORTHO05D001396 3.0e-07 58.9 109 34.9
CSS0031499 Camellia sinensis var. sinensis HOM05D000702 ORTHO05D001396 3.9e-07 58.5 109 35.8
COL.COLO4_26683 Corchorus olitorius HOM05D000702 ORTHO05D001396 3.9e-07 58.5 108 36.1
Glyma.07G023600 Glycine max HOM05D000702 ORTHO05D001396 3.9e-07 58.5 109 34.9
PGR031G2973 Punica granatum HOM05D000702 ORTHO05D001396 3.9e-07 58.5 113 34.5
arahy.Tifrunner.gnm1.ann1.BAME7Q Arachis hypogaea HOM05D000702 ORTHO05D001396 5.1e-07 58.2 109 33.9
arahy.Tifrunner.gnm1.ann1.DDDG3C Arachis hypogaea HOM05D000702 ORTHO05D001396 5.1e-07 58.2 109 33.9
MD17G1222500 Malus domestica HOM05D000702 ORTHO05D001396 5.1e-07 58.2 109 34.9
VMungo0331G0743 Vigna mungo HOM05D000702 ORTHO05D001396 5.1e-07 58.2 109 33.9
Lsat_1_v5_gn_4_87161 Lactuca sativa HOM05D000702 ORTHO05D001396 6.7e-07 57.8 109 35.8
Lj3g0000708 Lotus japonicus HOM05D000702 ORTHO05D001396 6.7e-07 57.8 109 33.9
Medtr2g104990 Medicago truncatula HOM05D000702 ORTHO05D001396 6.7e-07 57.8 109 34.9
Phvul.005G182000 Phaseolus vulgaris HOM05D000702 ORTHO05D001396 6.7e-07 57.8 109 34.9
Eucgr.J03115 Eucalyptus grandis HOM05D000702 ORTHO05D001396 8.8e-07 57.4 109 35.8
Psat5g305480 Pisum sativum HOM05D000702 ORTHO05D001396 8.8e-07 57.4 109 33.9
VMungo1080G0533 Vigna mungo HOM05D000702 ORTHO05D001396 8.8e-07 57.4 109 34.9
FvH4_6g28670 Fragaria vesca HOM05D000702 ORTHO05D001396 1.1e-06 57.0 109 33.9
FAN14G3698 Fragaria x ananassa HOM05D000702 ORTHO05D001396 1.1e-06 57.0 109 33.9
Lalb_Chr14g0374091 Lupinus albus HOM05D000702 ORTHO05D001396 1.1e-06 57.0 109 35.8
RcHm_v2.0_Chr2g0133071 Rosa chinensis HOM05D000702 ORTHO05D001396 1.5e-06 56.6 109 33.0
TPR.G19170 Trifolium pratense HOM05D000702 ORTHO05D001396 1.5e-06 56.6 109 33.9
Gohir.A05G119700 Gossypium hirsutum HOM05D000702 ORTHO05D001396 2.0e-06 56.2 109 33.0
Gohir.D05G120700 Gossypium hirsutum HOM05D000702 ORTHO05D001396 2.0e-06 56.2 109 33.0
Gorai.009G124200 Gossypium raimondii HOM05D000702 ORTHO05D001396 2.0e-06 56.2 109 33.0
Ca_01019_v3 Cicer arietinum L. HOM05D000702 ORTHO05D001396 3.3e-06 55.5 109 33.0
FAN05G4195 Fragaria x ananassa HOM05D000702 ORTHO05D001396 3.3e-06 55.5 109 33.0
HanXRQChr07g0200621 Helianthus annuus HOM05D000702 ORTHO05D001396 3.3e-06 55.5 109 33.0
Potri.001G044900 Populus trichocarpa HOM05D000702 ORTHO05D001396 3.3e-06 55.5 113 35.4
Thecc.06G040700 Theobroma cacao HOM05D000702 ORTHO05D001396 3.3e-06 55.5 109 34.9
Ciclev10025318m.g Citrus clementina HOM05D000702 ORTHO05D001396 4.4e-06 55.1 109 33.9
FAN09G2795 Fragaria x ananassa HOM05D000702 ORTHO05D001396 4.4e-06 55.1 109 33.0
Lj9C493T9 Lonicera japonica HOM05D000702 ORTHO05D001396 4.4e-06 55.1 109 34.9
Manes.11G066100 Manihot esculenta HOM05D000702 ORTHO05D001396 5.7e-06 54.7 109 33.0
Manes.11G066200 Manihot esculenta HOM05D000702 ORTHO05D001396 5.7e-06 54.7 109 33.0
CANSAT56G1384 Cannabis sativa HOM05D000702 ORTHO05D001396 7.4e-06 54.3 113 32.7
Manes.11G065775 Manihot esculenta HOM05D000702 ORTHO05D001396 7.4e-06 54.3 109 32.1
QL05p036388 Quercus lobata HOM05D000702 ORTHO05D001396 7.4e-06 54.3 109 33.0
Dinv21409 Davidia involucrata HOM05D000702 ORTHO05D001396 9.7e-06 53.9 41 63.4
ECA232G4115 Erigeron canadensis HOM05D000702 ORTHO05D001396 9.7e-06 53.9 109 33.0


User provided reference genes

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