Gene: AT1G15960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G15960
  • Transcript Identifier AT1G15960.1
  • Gene Type Coding gene
  • Location Chr1 : 5482202-5485066 : negative

Gene Family Information

  • ID HOM05D000702
  • #Genes/#Species 815/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G15960.1
  • symbol NRAMP6
  • Alias ATNRAMP6
  • uniprot Q9S9N8

Descriptions

  • Description NRAMP metal ion transporter 6
  • Computational description NRAMP metal ion transporter 6 (NRAMP6); FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 1 (TAIR:AT1G80830.1); Has 5518 Blast hits to 5467 proteins in 1679 species: Archae - 118; Bacteria - 4110; Metazoa - 356; Fungi - 271; Plants - 336; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034755
ISO
PLAZA Integrative Orthologyiron ion transmembrane transport Os07g0258400
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc11g018530.2
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin Solyc11g018530.2
GO:0015690
ISO
PLAZA Integrative Orthologyaluminum cation transport Os02g0131800
GO:0010044
ISO
PLAZA Integrative Orthologyresponse to aluminum ion Os02g0131800
GO:0030001
IEA
GOA Databasemetal ion transport
GO:0030001
NAS
Gene Ontologymetal ion transport1
GO:0030001
IEA
InterPrometal ion transport
GO:0055072
IEA
GOA Databaseiron ion homeostasis
GO:0006811
IEA
GOA Databaseion transport
GO:0071421
IEA
GOA Databasemanganese ion transmembrane transport
GO:0070574
IDA
Gene Ontologycadmium ion transmembrane transport2
GO:0006875
NAS
Gene Ontologycellular metal ion homeostasis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015083
ISO
PLAZA Integrative Orthologyaluminum ion transmembrane transporter activity Os02g0131800
GO:0005381
ISO
PLAZA Integrative Orthologyiron ion transmembrane transporter activity Os07g0258400
GO:0046873
IEA
GOA Databasemetal ion transmembrane transporter activity
GO:0046873
NAS
Gene Ontologymetal ion transmembrane transporter activity1
GO:0046873
IEA
InterPrometal ion transmembrane transporter activity
GO:0015086
IDA
IBA
Gene Ontologycadmium ion transmembrane transporter activity2 3
GO:0005384
IBA
Gene Ontologymanganese ion transmembrane transporter activity3
GO:0015103
ISS
Gene Ontologyinorganic anion transmembrane transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane Os02g0131800
GO:0009507
ISM
Gene Ontologychloroplast
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0012505
IEA
GOA Databaseendomembrane system

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001046 NRAMP family
Mapman id Description
24.2.3.10 Solute transport.carrier-mediated transport.APC superfamily.metal cation transporter (NRAMP)