Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.5e-181 639.4 329 100.0
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.1e-155 552.0 323 87.0
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 5.4e-155 551.2 323 86.1
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 2.0e-154 549.3 322 86.3
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.9e-153 545.4 321 86.6
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 3.8e-153 545.0 323 85.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.2e-151 540.0 319 85.9
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.8e-151 538.9 319 85.6
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.4e-150 536.6 319 85.0
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.0e-145 520.4 324 82.7
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 8.0e-143 510.8 319 80.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.0e-142 510.4 304 85.9
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.0e-141 506.1 305 84.6
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.9e-123 446.4 315 71.7
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 5.4e-123 444.9 318 70.4
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.6e-122 443.4 317 70.0
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 7.8e-122 441.0 318 70.1
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.3e-121 440.3 318 70.1
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.1e-120 437.2 316 70.3
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 2.5e-120 436.0 317 69.4
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 5.6e-120 434.9 316 69.6
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 9.5e-120 434.1 316 69.6
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.8e-119 432.6 320 67.5
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.4e-118 430.3 319 67.7
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.4e-118 430.3 323 66.9
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.8e-118 429.9 320 66.6
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 6.8e-118 427.9 317 67.5
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 8.9e-118 427.6 320 67.8
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 3.4e-117 425.6 321 68.5
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 9.9e-117 424.1 319 69.6
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.7e-116 423.3 317 69.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.2e-116 422.9 318 65.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.9e-116 422.5 323 65.9
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.1e-115 420.6 320 67.2
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.4e-115 420.2 320 67.2
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.2e-115 419.1 317 66.2
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.6e-114 416.8 320 66.9
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.6e-114 416.8 318 68.6
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.6e-114 416.8 326 66.0
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.7e-114 416.0 323 66.6
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.0e-114 414.8 320 65.9
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.0e-114 414.8 320 66.2
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-113 413.7 320 66.6
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.0e-113 412.5 320 66.2
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 4.3e-112 408.7 322 65.2
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 2.1e-111 406.4 323 64.1
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 4.7e-111 405.2 323 63.2
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 8.1e-111 404.4 322 63.0
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 3.1e-110 402.5 323 64.7
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 4.0e-110 402.1 318 61.3
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 4.4e-109 398.7 324 63.6
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 3.8e-108 395.6 317 64.7
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.8e-108 395.6 324 59.9
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.8e-108 395.6 324 59.9
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 4.2e-107 392.1 322 61.2
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 4.2e-107 392.1 320 59.4
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 2.1e-106 389.8 318 63.2
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.1e-106 389.8 320 58.8
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 7.8e-106 387.9 321 62.9
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.1e-104 384.0 320 62.8
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 4.3e-104 382.1 322 61.8
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 9.6e-104 380.9 319 61.8
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.6e-103 380.2 320 61.6
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.8e-103 379.4 318 58.2
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.6e-103 379.0 318 59.1
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.6e-103 379.0 318 59.1
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 1.1e-102 377.5 315 61.3
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.1e-102 377.5 299 62.5
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.1e-102 375.9 316 61.7
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.6e-101 372.9 318 61.0
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 3.4e-101 372.5 316 61.4
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.1e-98 363.2 322 57.8
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 3.0e-97 359.4 321 59.5
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 5.1e-97 358.6 319 57.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.9e-96 356.7 318 58.2
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.1e-94 350.9 291 59.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 1.1e-94 350.9 269 63.2
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 3.1e-94 349.4 320 55.9
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 4.0e-94 349.0 319 56.4
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 6.4e-92 341.7 321 54.8
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 7.1e-91 338.2 268 65.7
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 9.3e-91 337.8 324 54.9
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 6.0e-90 335.1 316 54.1
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.3e-89 334.0 325 55.1
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.1e-86 324.3 323 53.3
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 5.3e-86 322.0 326 54.6
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.3e-84 317.4 188 83.5
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.2e-82 310.8 324 51.9
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.1e-82 310.1 240 62.1
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.6e-79 300.4 323 49.5
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 4.1e-78 295.8 316 49.1
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.0e-77 293.5 318 51.3
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 3.8e-76 289.3 325 50.5
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.4e-75 287.3 325 48.9
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 9.4e-75 284.6 261 55.9
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.3e-71 274.2 284 53.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 7.4e-64 248.4 326 44.2
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 6.3e-63 245.4 173 71.1
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.9e-59 233.8 315 41.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.2e-55 220.3 208 52.9
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 4.8e-55 219.2 226 54.4
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.2e-52 210.3 160 65.6
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.0e-52 209.1 202 53.5
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.0e-44 184.9 255 42.0
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.4e-32 142.9 109 62.4
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.2e-31 140.6 109 62.4
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 8.6e-28 128.6 269 30.9
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.9e-27 127.5 86 70.9
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.4e-22 111.3 120 50.0
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 8.6e-20 102.1 110 52.7
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 6.8e-09 65.9 66 56.1
MCO05G070 Micromonas commoda HOM05D002465 ORTHO05D008860 2.4e-06 57.4 247 24.7


User provided reference genes

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