Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 6.8e-159 563.9 279 100.0
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.4e-132 475.7 280 82.5
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 2.4e-132 475.7 280 82.5
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 2.5e-129 465.7 280 80.4
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 1.8e-127 459.5 280 80.0
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 3.1e-127 458.8 280 79.3
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 3.4e-126 455.3 280 81.4
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 1.9e-124 449.5 280 80.4
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 1.6e-123 446.4 280 77.9
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 2.1e-123 446.0 280 77.5
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 2.1e-123 446.0 280 77.5
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 2.1e-123 446.0 280 77.5
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 3.5e-123 445.3 280 77.5
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 6.0e-123 444.5 281 77.9
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 1.1e-113 413.7 280 74.6
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 7.1e-92 341.3 281 58.4
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 2.3e-90 336.3 280 59.6
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 5.1e-90 335.1 265 65.7
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 6.7e-90 334.7 280 59.6
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 4.3e-89 332.0 279 59.1
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 2.8e-88 329.3 287 59.2
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 3.1e-87 325.9 267 63.3
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 9.0e-87 324.3 287 58.2
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 2.2e-85 319.7 249 63.1
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 2.2e-85 319.7 245 64.5
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 2.9e-85 319.3 255 63.9
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 5.0e-85 318.5 248 60.9
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 6.5e-85 318.2 255 61.2
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 8.5e-85 317.8 276 56.9
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 1.1e-84 317.4 281 59.8
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 9.3e-84 314.3 267 59.6
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 9.3e-84 314.3 263 59.7
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 1.2e-83 313.9 275 57.8
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 1.2e-83 313.9 278 57.6
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 2.1e-83 313.2 254 61.8
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 2.1e-83 313.2 281 56.9
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 6.1e-83 311.6 254 61.4
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 6.1e-83 311.6 275 57.5
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.0e-82 310.8 266 59.0
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.0e-82 310.8 249 61.4
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 1.8e-82 310.1 261 60.5
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 3.0e-82 309.3 273 58.6
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 8.7e-82 307.8 268 57.8
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 1.1e-81 307.4 276 56.9
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 1.1e-81 307.4 273 57.9
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.1e-81 307.4 263 59.7
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 2.5e-81 306.2 253 57.7
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 3.3e-81 305.8 276 56.5
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 5.7e-81 305.1 271 58.7
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.7e-81 305.1 265 58.1
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 5.7e-81 305.1 253 59.7
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.2e-80 303.1 259 58.3
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 2.8e-80 302.8 259 57.9
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.8e-80 302.8 259 58.3
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.8e-80 302.8 259 57.9
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.8e-80 302.8 259 58.3
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.2e-80 301.2 259 58.3
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 3.1e-79 299.3 291 56.0
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 4.1e-79 298.9 261 58.6
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 1.5e-78 297.0 250 59.6
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 5.9e-78 295.0 291 52.2
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 7.7e-78 294.7 271 54.2
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 1.0e-77 294.3 282 53.2
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 1.3e-77 293.9 303 49.8
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 1.7e-77 293.5 226 62.8
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 2.2e-77 293.1 257 59.1
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 2.9e-77 292.7 255 55.3
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 5.0e-77 292.0 270 54.4
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 1.1e-76 290.8 263 58.2
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.4e-76 290.4 259 55.6
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 5.5e-76 288.5 262 55.0
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 9.4e-76 287.7 275 53.5
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 1.2e-75 287.3 253 57.3
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.2e-75 287.3 280 55.4
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 1.6e-75 287.0 257 56.0
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 3.6e-75 285.8 280 55.4
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 3.6e-75 285.8 296 52.0
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 6.1e-75 285.0 301 53.5
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 2.3e-74 283.1 302 53.3
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 3.9e-74 282.3 280 55.4
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 3.9e-74 282.3 257 55.3
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 5.1e-74 282.0 258 56.6
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 2.6e-73 279.6 267 56.6
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 1.8e-71 273.5 248 52.4
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 3.1e-71 272.7 244 55.7
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 5.3e-71 271.9 265 53.2
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 6.9e-71 271.6 245 55.9
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 9.1e-71 271.2 259 54.8
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.9e-69 266.2 245 53.5
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 2.5e-68 263.1 223 60.5
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 1.2e-67 260.8 264 50.0
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 2.3e-66 256.5 226 54.9
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 5.2e-66 255.4 215 57.2
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 6.7e-66 255.0 273 50.5
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 1.1e-65 254.2 233 54.5
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 9.7e-65 251.1 191 66.0
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.0e-61 241.1 292 46.6
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 1.7e-61 240.4 224 56.7
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 2.2e-61 240.0 237 52.7
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 3.8e-61 239.2 192 59.4
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 6.7e-58 228.4 264 48.9
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 3.6e-51 206.1 263 46.0
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.4e-47 194.1 255 45.5
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.3e-45 187.6 241 42.3
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 1.7e-45 187.2 185 51.4
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 4.4e-41 172.6 232 41.8
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 7.5e-41 171.8 239 42.7
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 8.9e-34 148.3 258 33.7
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 1.7e-32 144.1 239 33.9
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 5.9e-30 135.6 113 54.9
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 5.9e-30 135.6 113 54.9
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 5.9e-30 135.6 248 34.3
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 2.3e-29 133.7 135 54.8
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.8e-27 126.7 152 44.1
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.0e-27 125.2 150 43.3
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 4.0e-26 122.9 145 47.6
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 2.6e-25 120.2 93 68.8
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 9.8e-25 118.2 79 74.7
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 5.4e-23 112.5 229 32.8
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 9.2e-23 111.7 296 29.1
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 2.7e-22 110.2 244 30.7
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 6.0e-22 109.0 122 50.0
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 1.5e-20 104.4 274 29.9
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 2.7e-14 83.6 76 59.2
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.0e-13 81.6 89 41.6
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.5e-12 77.8 59 59.3
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 9.5e-12 75.1 49 73.5
FvH4_7g29023 Fragaria vesca HOM05D005908 ORTHO05D007235 2.8e-11 73.6 69 53.6
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 6.4e-08 62.4 57 54.4
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 2.7e-06 57.0 30 80.0


User provided reference genes

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