Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G7110 Aethionema arabicum HOM05D000902 ORTHO05D013400 1.3e-102 376.7 236 100.0
AL8G24940 Arabidopsis lyrata HOM05D000902 ORTHO05D000832 1.2e-28 131.0 232 47.4
AT5G50780 Arabidopsis thaliana HOM05D000902 ORTHO05D000832 4.0e-27 125.9 231 45.5
Sp6g12880 Schrenkiella parvula HOM05D000902 ORTHO05D000832 7.0e-24 115.2 221 43.0
Carub.0008s1068 Capsella rubella HOM05D000902 ORTHO05D000832 1.8e-19 100.5 231 40.7
BolC3t14334H Brassica oleracea HOM05D000902 ORTHO05D000832 3.4e-18 96.3 227 40.1
A03p16600 Brassica napus HOM05D000902 ORTHO05D000832 2.2e-17 93.6 223 39.5
BraA03t10947Z Brassica rapa HOM05D000902 ORTHO05D000832 2.2e-17 93.6 223 39.5
C03p19530 Brassica napus HOM05D000902 ORTHO05D000832 2.7e-15 86.7 215 39.5
Thhalv10012707m.g Eutrema salsugineum HOM05D000902 ORTHO05D000832 2.7e-15 86.7 117 48.7
BcaB05g24035 Brassica carinata HOM05D000902 ORTHO05D000832 1.0e-14 84.7 238 34.5
Dinv11201 Davidia involucrata HOM05D000902 ORTHO05D000832 3.3e-13 79.7 106 46.2
arahy.Tifrunner.gnm1.ann1.Q161UF Arachis hypogaea HOM05D000902 ORTHO05D000832 8.9e-11 71.6 221 30.3
CANSAT80G0625 Cannabis sativa HOM05D000902 ORTHO05D000832 1.2e-10 71.2 109 41.3
CARHR257520 Cardamine hirsuta HOM05D000902 ORTHO05D000832 1.2e-10 71.2 197 35.5
Hund02463 Selenicereus undatus HOM05D000902 ORTHO05D000832 2.0e-10 70.5 128 37.5
Cpa.g.sc4.155 Carica papaya HOM05D000902 ORTHO05D000832 5.8e-10 68.9 109 44.0
arahy.Tifrunner.gnm1.ann1.LR2QKH Arachis hypogaea HOM05D000902 ORTHO05D000832 7.6e-10 68.6 222 30.2
Ca_17571_v3 Cicer arietinum L. HOM05D000902 ORTHO05D000832 1.3e-09 67.8 128 39.1
VMungo0251G1748 Vigna mungo HOM05D000902 ORTHO05D000832 1.3e-09 67.8 243 32.9
MELO3C026187.2 Cucumis melo HOM05D000902 ORTHO05D000832 1.7e-09 67.4 112 43.8
SGA_v2.0_scaffold188G40336 Striga asiatica HOM05D000902 ORTHO05D000832 1.7e-09 67.4 110 44.5
BcaNung03985 Brassica carinata HOM05D000902 ORTHO05D000832 2.2e-09 67.0 80 51.2
Peaxi162Scf00516g00215 Petunia axillaris HOM05D000902 ORTHO05D000832 3.7e-09 66.2 127 40.9
CSS0007487 Camellia sinensis var. sinensis HOM05D000902 ORTHO05D000832 4.9e-09 65.9 109 40.4
Ciclev10030712m.g Citrus clementina HOM05D000902 ORTHO05D000832 6.4e-09 65.5 102 43.1
CsaV3_1G000340 Cucumis sativus L. HOM05D000902 ORTHO05D000832 6.4e-09 65.5 112 42.9
TPR.G559 Trifolium pratense HOM05D000902 ORTHO05D013400 8.4e-09 65.1 98 41.8
DCAR_013057 Daucus carota HOM05D000902 ORTHO05D000832 1.4e-08 64.3 107 38.3
A01p16260 Brassica napus HOM05D000902 ORTHO05D000832 1.9e-08 63.9 120 43.3
Oeu048892.2 Olea europaea HOM05D000902 ORTHO05D013400 1.9e-08 63.9 100 42.0
Psat7g037320 Pisum sativum HOM05D000902 ORTHO05D000832 1.9e-08 63.9 109 39.4
C01p20260 Brassica napus HOM05D000902 ORTHO05D000832 2.4e-08 63.5 119 42.0
BraA01t01563Z Brassica rapa HOM05D000902 ORTHO05D000832 2.4e-08 63.5 120 43.3
TWI14G0729 Tripterygium wilfordii HOM05D000902 ORTHO05D000832 2.4e-08 63.5 116 37.9
TAR629G3413 Trochodendron aralioides HOM05D000902 ORTHO05D000832 2.4e-08 63.5 278 27.7
BcaC09g50827 Brassica carinata HOM05D000902 ORTHO05D000832 3.2e-08 63.2 120 43.3
Gohir.A07G048600 Gossypium hirsutum HOM05D000902 ORTHO05D000832 3.2e-08 63.2 113 42.5
Gohir.A12G191700 Gossypium hirsutum HOM05D000902 ORTHO05D000832 3.2e-08 63.2 102 43.1
Sed0001603 Sechium edule HOM05D000902 ORTHO05D000832 3.2e-08 63.2 108 42.6
Gohir.D07G052900 Gossypium hirsutum HOM05D000902 ORTHO05D000832 4.1e-08 62.8 113 42.5
Gorai.001G055900 Gossypium raimondii HOM05D000902 ORTHO05D000832 4.1e-08 62.8 113 42.5
DCAR_020743 Daucus carota HOM05D000902 ORTHO05D000832 5.4e-08 62.4 118 34.7
BcaNung03989 Brassica carinata HOM05D000902 ORTHO05D000832 9.2e-08 61.6 79 48.1
BolC1t01956H Brassica oleracea HOM05D000902 ORTHO05D000832 9.2e-08 61.6 119 42.0
Lj5C92G16 Lonicera japonica HOM05D000902 ORTHO05D013400 9.2e-08 61.6 105 41.0
Atru.chr6.1870 Acer truncatum HOM05D000902 ORTHO05D000832 1.2e-07 61.2 108 41.7
Aa31LG7G10770 Aethionema arabicum HOM05D000902 ORTHO05D000832 1.2e-07 61.2 72 51.4
Glyma.08G010300 Glycine max HOM05D000902 ORTHO05D000832 1.6e-07 60.8 229 31.9
BcaC06g32845 Brassica carinata HOM05D000902 ORTHO05D000832 2.1e-07 60.5 79 46.8
Duzib205G1670 Durio zibethinus HOM05D000902 ORTHO05D000832 2.7e-07 60.1 202 32.7
Potri.015G100900 Populus trichocarpa HOM05D000902 ORTHO05D000832 3.5e-07 59.7 110 42.7
PGR044G2719 Punica granatum HOM05D000902 ORTHO05D000832 3.5e-07 59.7 96 40.6
AL7G28220 Arabidopsis lyrata HOM05D000902 ORTHO05D000832 4.6e-07 59.3 76 48.7
CARHR232370 Cardamine hirsuta HOM05D000902 ORTHO05D000832 7.8e-07 58.5 74 48.6
Cc04_g09610 Coffea canephora HOM05D000902 ORTHO05D000832 7.8e-07 58.5 103 37.9
Gohir.D12G194050 Gossypium hirsutum HOM05D000902 ORTHO05D000832 7.8e-07 58.5 248 29.0
Phvul.002G284600 Phaseolus vulgaris HOM05D000902 ORTHO05D000832 1.0e-06 58.2 243 28.8
SalBow5G4873 Salvia bowleyana HOM05D000902 ORTHO05D000832 1.3e-06 57.8 105 39.0
Sp7g22960 Schrenkiella parvula HOM05D000902 ORTHO05D000832 1.3e-06 57.8 118 39.0
Hund10108 Selenicereus undatus HOM05D000902 ORTHO05D000832 1.3e-06 57.8 109 37.6
Haze_07183 Corylus avellana HOM05D000902 ORTHO05D000832 1.7e-06 57.4 103 38.8
Rhsim08G0193200 Rhododendron simsii HOM05D000902 ORTHO05D000832 1.7e-06 57.4 102 38.2
GSVIVG01008587001 Vitis vinifera HOM05D000902 ORTHO05D000832 1.7e-06 57.4 249 27.3
AT4G24970 Arabidopsis thaliana HOM05D000902 ORTHO05D000832 2.3e-06 57.0 73 47.9
MBI11_g13057_MAGBIO Magnolia biondii HOM05D000902 ORTHO05D000832 2.3e-06 57.0 102 41.2
CSS0044547 Camellia sinensis var. sinensis HOM05D000902 ORTHO05D000832 5.1e-06 55.8 113 36.3
EL10Ac5g11361 Beta vulgaris HOM05D000902 ORTHO05D000832 6.6e-06 55.5 79 43.0
Dinv23182 Davidia involucrata HOM05D000902 ORTHO05D000832 6.6e-06 55.5 275 26.9
Lj9A482G21 Lonicera japonica HOM05D000902 ORTHO05D000832 6.6e-06 55.5 59 50.8
TAR371G0242 Trochodendron aralioides HOM05D000902 ORTHO05D000832 6.6e-06 55.5 276 26.4
Aqoxy5G03251 Aquilegia oxysepala HOM05D000902 ORTHO05D000832 8.6e-06 55.1 100 37.0
Cfa018751 Carpinus fangiana HOM05D000902 ORTHO05D000832 8.6e-06 55.1 103 37.9
Hma1.2p1_0168F.1_g074340 Hydrangea macrophylla HOM05D000902 ORTHO05D000832 8.6e-06 55.1 59 47.5
Lj4g0027865 Lotus japonicus HOM05D000902 ORTHO05D000832 8.6e-06 55.1 235 28.1
Lalb_Chr13g0297161 Lupinus albus HOM05D000902 ORTHO05D000832 8.6e-06 55.1 248 29.4
Sabra15G0121300 Salix brachista HOM05D000902 ORTHO05D000832 8.6e-06 55.1 109 41.3
vmacro16731 Vaccinium macrocarpon HOM05D000902 ORTHO05D000832 8.6e-06 55.1 54 50.0


User provided reference genes

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