Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G4380 Aethionema arabicum HOM05D010067 ORTHO05D012286 5.1e-111 404.4 207 100.0
Aa31LG3G4360 Aethionema arabicum HOM05D010067 ORTHO05D012286 4.1e-68 261.9 220 65.9
Aa31LG3G4370 Aethionema arabicum HOM05D010067 ORTHO05D012286 4.1e-36 155.6 118 72.0
Aa31LG3G620 Aethionema arabicum HOM05D010067 ORTHO05D012286 7.3e-33 144.8 145 57.2
AT5G27130 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 7.0e-28 128.3 205 42.4
Aa31LG4G13670 Aethionema arabicum HOM05D010067 ORTHO05D012286 1.1e-25 120.9 133 48.9
Aa31LG4G13760 Aethionema arabicum HOM05D010067 ORTHO05D012286 4.3e-25 119.0 128 49.2
Thhalv10015516m.g Eutrema salsugineum HOM05D010067 ORTHO05D012286 4.3e-25 119.0 148 48.6
Carub.0006s2537 Capsella rubella HOM05D010067 ORTHO05D012286 3.1e-23 112.8 155 43.9
AT1G48150 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 5.2e-23 112.1 147 47.6
Aa31LG3G18740 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.4e-22 109.4 175 42.9
AL5G21590 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 3.4e-22 109.4 166 42.8
Carub.0005s0962 Capsella rubella HOM05D010067 ORTHO05D012286 5.8e-22 108.6 209 36.4
AL5G21870 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 7.5e-22 108.2 156 45.5
A02p38510 Brassica napus HOM05D010067 ORTHO05D012286 3.7e-21 105.9 151 44.4
BraA02t08829Z Brassica rapa HOM05D010067 ORTHO05D012286 4.1e-20 102.4 137 45.3
AL4G20910 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 2.1e-19 100.1 153 42.5
BcaC03g17772 Brassica carinata HOM05D010067 ORTHO05D012286 2.7e-19 99.8 151 42.4
C02p57880 Brassica napus HOM05D010067 ORTHO05D012286 2.7e-19 99.8 149 42.3
Aa31sc24G40 Aethionema arabicum HOM05D010067 ORTHO05D012286 4.6e-19 99.0 134 45.5
BolC2t11856H Brassica oleracea HOM05D010067 ORTHO05D012286 6.0e-19 98.6 151 41.7
THA.LOC104820129 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 6.4e-13 78.6 161 38.5
THA.LOC104823173 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.4e-12 76.6 153 37.9
Aa31LG4G14150 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.5e-11 72.8 131 38.9
Carub.0002s1331 Capsella rubella HOM05D006070 ORTHO05D009119 3.5e-11 72.8 135 36.3
C09p72150 Brassica napus HOM05D006070 ORTHO05D020096 6.0e-11 72.0 196 29.1
BolC9t59959H Brassica oleracea HOM05D006070 ORTHO05D020096 6.0e-11 72.0 196 29.1
BcaC06g32177 Brassica carinata HOM05D006070 ORTHO05D020096 1.0e-10 71.2 145 35.9
AT1G46408 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 5.1e-10 68.9 141 34.0
Carub.0002s1330 Capsella rubella HOM05D006070 ORTHO05D009119 6.6e-10 68.6 129 32.6
A10p31460 Brassica napus HOM05D006070 ORTHO05D020096 8.7e-10 68.2 145 34.5
BraA10t45192Z Brassica rapa HOM05D006070 ORTHO05D020096 8.7e-10 68.2 145 34.5
Carub.0004s0822 Capsella rubella HOM05D006070 ORTHO05D009119 1.1e-09 67.8 187 28.3
BcaB07g31239 Brassica carinata HOM05D006070 ORTHO05D009119 1.5e-09 67.4 136 34.6
BcaC04g22285 Brassica carinata HOM05D006070 ORTHO05D009119 1.9e-09 67.0 136 35.3
C09p21210 Brassica napus HOM05D006070 ORTHO05D009119 1.9e-09 67.0 136 35.3
AT1G50780 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 2.5e-09 66.6 91 40.7
A09p17140 Brassica napus HOM05D006070 ORTHO05D009119 4.3e-09 65.9 136 33.8
BraA09t37345Z Brassica rapa HOM05D006070 ORTHO05D009119 4.3e-09 65.9 136 33.8
Cpa.g.sc173.25 Carica papaya HOM05D021832 ORTHO05D120906 7.3e-09 65.1 208 26.4
Cpa.g.sc173.23 Carica papaya HOM05D021832 ORTHO05D118647 9.6e-09 64.7 208 26.4
Cpa.g.sc173.32 Carica papaya HOM05D021832 ORTHO05D009119 1.2e-08 64.3 172 29.1
THA.LOC104819503 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.2e-08 64.3 146 29.5
THA.LOC104819512 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.2e-08 64.3 146 29.5
BcaC04g22292 Brassica carinata HOM05D006070 ORTHO05D009119 1.6e-08 63.9 137 35.8
C09p21070 Brassica napus HOM05D006070 ORTHO05D009119 1.6e-08 63.9 137 35.8
BolC9t55008H Brassica oleracea HOM05D006070 ORTHO05D009119 1.6e-08 63.9 137 35.8
Sp2g03770 Schrenkiella parvula HOM05D006070 ORTHO05D009119 3.6e-08 62.8 119 37.8
AL2G15570 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 4.7e-08 62.4 136 34.6
Cpa.g.sc173.35 Carica papaya HOM05D021832 ORTHO05D118627 4.7e-08 62.4 155 29.0
BolC9t55023H Brassica oleracea HOM05D006070 ORTHO05D009119 6.2e-08 62.0 136 34.6
Cpa.g.sc1046.4 Carica papaya HOM05D006070 ORTHO05D009119 6.2e-08 62.0 163 30.1
THA.LOC104820133 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 8.1e-08 61.6 88 48.9
CARHR221010 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.1e-07 61.2 193 30.6
AL2G15620 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 2.4e-07 60.1 144 31.9
PSO339G6252 Papaver somniferum HOM05D000203 ORTHO05D012050 3.1e-07 59.7 139 36.0
PSO384G4243 Papaver somniferum HOM05D000203 ORTHO05D012050 3.1e-07 59.7 139 36.0
AT1G60920 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 4.0e-07 59.3 137 34.3
A09p17040 Brassica napus HOM05D006070 ORTHO05D009119 4.0e-07 59.3 137 34.3
BraA09t37339Z Brassica rapa HOM05D006070 ORTHO05D009119 4.0e-07 59.3 137 34.3
Thhalv10023175m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 4.0e-07 59.3 116 34.5
Thhalv10023813m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 4.0e-07 59.3 184 27.7
Thhalv10015623m.g Eutrema salsugineum HOM05D006070 ORTHO05D020096 5.3e-07 58.9 118 31.4
Lsat_1_v5_gn_5_144220 Lactuca sativa HOM05D000203 ORTHO05D000135 6.9e-07 58.5 149 31.5
PSO384G2895 Papaver somniferum HOM05D000203 ORTHO05D012050 6.9e-07 58.5 139 34.5
THA.LOC104820177 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 6.9e-07 58.5 79 41.8
PSO384G3182 Papaver somniferum HOM05D025184 ORTHO05D012050 9.0e-07 58.2 139 33.1
PSO339G4623 Papaver somniferum HOM05D000203 ORTHO05D012050 1.2e-06 57.8 197 28.4
PSO384G2113 Papaver somniferum HOM05D000203 ORTHO05D012050 1.2e-06 57.8 139 33.8
Sp2g03710 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.5e-06 57.4 119 35.3
BcaC08g43039 Brassica carinata HOM05D006070 ORTHO05D009119 2.0e-06 57.0 163 29.4
BcaC08g43048 Brassica carinata HOM05D006070 ORTHO05D009119 2.0e-06 57.0 163 29.4
PSO384G1221 Papaver somniferum HOM05D000203 ORTHO05D012050 2.0e-06 57.0 139 33.8
C06p02990 Brassica napus HOM05D006070 ORTHO05D009119 2.6e-06 56.6 162 28.4
C06p04630 Brassica napus HOM05D006070 ORTHO05D009119 2.6e-06 56.6 156 31.4
BolC6t35422H Brassica oleracea HOM05D006070 ORTHO05D009119 2.6e-06 56.6 162 28.4
Cpa.g.sc43.109 Carica papaya HOM05D006070 ORTHO05D009119 2.6e-06 56.6 185 29.2
CiPaw.06G162900 Carya illinoinensis HOM05D000203 ORTHO05D000135 3.4e-06 56.2 149 33.6
C06p03100 Brassica napus HOM05D006070 ORTHO05D009119 4.4e-06 55.8 154 31.2
BolC6t35429H Brassica oleracea HOM05D006070 ORTHO05D009119 4.4e-06 55.8 154 31.2
Carub.0002s0435 Capsella rubella HOM05D006070 ORTHO05D009119 4.4e-06 55.8 137 29.9
BcaB04g17293 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-06 55.5 81 40.7
BcaNung06358 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-06 55.5 156 30.8
BolC6t35592H Brassica oleracea HOM05D006070 ORTHO05D009119 5.8e-06 55.5 156 30.8
Thhalv10023871m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 5.8e-06 55.5 137 30.7
Sp5g22450 Schrenkiella parvula HOM05D006070 ORTHO05D020096 5.8e-06 55.5 119 30.3
PSO384G2063 Papaver somniferum HOM05D000203 ORTHO05D012050 7.6e-06 55.1 139 33.8
PSO384G5130 Papaver somniferum HOM05D000203 ORTHO05D012050 7.6e-06 55.1 139 33.8
AT5G04640 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 9.9e-06 54.7 94 36.2
Carub.0007s2769 Capsella rubella HOM05D006070 ORTHO05D009119 9.9e-06 54.7 120 32.5


User provided reference genes

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