Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G4360 Aethionema arabicum HOM05D010067 ORTHO05D012286 1.8e-142 509.2 260 100.0
Aa31LG3G4380 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.3e-67 259.2 220 65.9
Aa31LG3G4370 Aethionema arabicum HOM05D010067 ORTHO05D012286 2.8e-42 176.4 127 73.2
Aa31LG3G620 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.7e-34 149.4 145 58.6
Aa31LG4G13670 Aethionema arabicum HOM05D010067 ORTHO05D012286 1.5e-30 137.5 129 55.0
Aa31LG4G13760 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.3e-30 136.3 129 54.3
Thhalv10015516m.g Eutrema salsugineum HOM05D010067 ORTHO05D012286 2.6e-27 126.7 246 39.0
AT1G48150 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 2.8e-26 123.2 148 49.3
AL5G21590 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 3.7e-26 122.9 170 44.1
AT5G27130 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 1.1e-25 121.3 254 35.0
Carub.0006s2537 Capsella rubella HOM05D010067 ORTHO05D012286 1.4e-25 120.9 236 36.0
Aa31LG3G18740 Aethionema arabicum HOM05D010067 ORTHO05D012286 2.0e-24 117.1 188 43.1
AL5G21870 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 2.0e-24 117.1 148 46.6
Carub.0005s0962 Capsella rubella HOM05D010067 ORTHO05D012286 6.6e-23 112.1 144 45.1
A02p38510 Brassica napus HOM05D010067 ORTHO05D012286 4.3e-22 109.4 189 37.6
Aa31sc24G40 Aethionema arabicum HOM05D010067 ORTHO05D012286 1.2e-21 107.8 136 47.8
AL4G20910 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 1.6e-21 107.5 155 41.9
BraA02t08829Z Brassica rapa HOM05D010067 ORTHO05D012286 3.6e-21 106.3 192 37.5
BcaC03g17772 Brassica carinata HOM05D010067 ORTHO05D012286 4.0e-20 102.8 189 36.0
C02p57880 Brassica napus HOM05D010067 ORTHO05D012286 6.8e-20 102.1 152 41.4
BolC2t11856H Brassica oleracea HOM05D010067 ORTHO05D012286 8.9e-20 101.7 189 35.4
Aa31LG4G14150 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.4e-19 99.8 132 47.0
THA.LOC104823173 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.8e-12 77.4 216 32.4
C09p72150 Brassica napus HOM05D006070 ORTHO05D020096 2.3e-12 77.0 169 32.5
BolC9t59959H Brassica oleracea HOM05D006070 ORTHO05D020096 2.3e-12 77.0 169 32.5
BcaC06g32177 Brassica carinata HOM05D006070 ORTHO05D020096 1.5e-11 74.3 146 36.3
A10p31460 Brassica napus HOM05D006070 ORTHO05D020096 7.5e-11 72.0 161 32.9
BraA10t45192Z Brassica rapa HOM05D006070 ORTHO05D020096 7.5e-11 72.0 161 32.9
BcaB07g31239 Brassica carinata HOM05D006070 ORTHO05D009119 4.9e-10 69.3 174 31.6
BcaC04g22285 Brassica carinata HOM05D006070 ORTHO05D009119 4.9e-10 69.3 137 35.8
A09p17140 Brassica napus HOM05D006070 ORTHO05D009119 4.9e-10 69.3 137 34.3
C09p21210 Brassica napus HOM05D006070 ORTHO05D009119 4.9e-10 69.3 137 35.8
BraA09t37345Z Brassica rapa HOM05D006070 ORTHO05D009119 4.9e-10 69.3 137 34.3
AT1G50780 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 1.1e-09 68.2 98 40.8
Carub.0002s1331 Capsella rubella HOM05D006070 ORTHO05D009119 3.2e-09 66.6 124 33.9
THA.LOC104820129 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 9.2e-09 65.1 116 42.2
BolC9t55023H Brassica oleracea HOM05D006070 ORTHO05D009119 1.6e-08 64.3 137 35.0
THA.LOC104819503 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 6.0e-08 62.4 147 29.9
THA.LOC104819512 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 6.0e-08 62.4 147 29.9
AL2G15570 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 7.8e-08 62.0 121 36.4
Cpa.g.sc173.32 Carica papaya HOM05D021832 ORTHO05D009119 1.0e-07 61.6 170 29.4
Thhalv10023175m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.7e-07 60.8 117 33.3
Sp2g03770 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.7e-07 60.8 138 32.6
Thhalv10023813m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 2.3e-07 60.5 182 29.7
BcaC04g22292 Brassica carinata HOM05D006070 ORTHO05D009119 3.9e-07 59.7 163 30.7
C09p21070 Brassica napus HOM05D006070 ORTHO05D009119 3.9e-07 59.7 163 30.7
BolC9t55008H Brassica oleracea HOM05D006070 ORTHO05D009119 3.9e-07 59.7 163 30.7
THA.LOC104820177 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 3.9e-07 59.7 81 42.0
Cpa.g.sc1046.4 Carica papaya HOM05D006070 ORTHO05D009119 6.6e-07 58.9 163 28.2
Cpa.g.sc173.23 Carica papaya HOM05D021832 ORTHO05D118647 1.1e-06 58.2 170 27.6
Cpa.g.sc173.25 Carica papaya HOM05D021832 ORTHO05D120906 1.1e-06 58.2 170 27.6
Cpa.g.sc173.35 Carica papaya HOM05D021832 ORTHO05D118627 1.9e-06 57.4 170 27.6
Oeu049760.1 Olea europaea HOM05D000203 ORTHO05D000135 1.9e-06 57.4 97 36.1
Sp2g03710 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.9e-06 57.4 180 28.9
AT1G46408 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 3.3e-06 56.6 262 26.3
Oeu049758.1 Olea europaea HOM05D000203 ORTHO05D000135 3.3e-06 56.6 106 39.6
Nitab4.5_0002840g0130 Nicotiana tabacum HOM05D000203 ORTHO05D010688 4.3e-06 56.2 143 35.7
A09p17040 Brassica napus HOM05D006070 ORTHO05D009119 7.3e-06 55.5 163 29.4
BraA09t37339Z Brassica rapa HOM05D006070 ORTHO05D009119 7.3e-06 55.5 138 31.2
Carub.0007s2769 Capsella rubella HOM05D006070 ORTHO05D009119 7.3e-06 55.5 121 33.1
THA.LOC104810603 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 7.3e-06 55.5 133 31.6
THA.LOC104810604 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 7.3e-06 55.5 133 31.6
AT1G60920 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 9.5e-06 55.1 122 32.8
Thhalv10015623m.g Eutrema salsugineum HOM05D006070 ORTHO05D020096 9.5e-06 55.1 117 30.8
THA.LOC104810605 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 9.5e-06 55.1 227 25.1


User provided reference genes

Program Settings