Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G18740 Aethionema arabicum HOM05D010067 ORTHO05D012286 7.4e-124 447.2 225 100.0
Aa31sc24G40 Aethionema arabicum HOM05D010067 ORTHO05D012286 8.4e-43 177.9 169 60.9
AT5G27130 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 2.1e-25 120.2 209 43.5
Aa31LG3G4360 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.3e-23 112.8 188 43.1
Carub.0006s2537 Capsella rubella HOM05D010067 ORTHO05D012286 1.3e-22 110.9 250 33.6
AL5G21590 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 2.2e-22 110.2 152 48.7
Thhalv10015516m.g Eutrema salsugineum HOM05D010067 ORTHO05D012286 2.8e-22 109.8 214 37.9
AL5G21870 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 2.4e-21 106.7 154 49.4
AT1G48150 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 2.4e-21 106.7 146 49.3
Aa31LG4G13670 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.1e-21 106.3 134 48.5
Aa31LG3G620 Aethionema arabicum HOM05D010067 ORTHO05D012286 5.3e-21 105.5 143 50.3
Aa31LG3G4380 Aethionema arabicum HOM05D010067 ORTHO05D012286 6.9e-21 105.1 175 42.9
Carub.0005s0962 Capsella rubella HOM05D010067 ORTHO05D012286 1.2e-20 104.4 149 47.7
Aa31LG4G13760 Aethionema arabicum HOM05D010067 ORTHO05D012286 2.6e-20 103.2 130 48.5
AL4G20910 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 2.6e-20 103.2 160 43.8
BraA02t08829Z Brassica rapa HOM05D010067 ORTHO05D012286 1.0e-19 101.3 170 44.1
A02p38510 Brassica napus HOM05D010067 ORTHO05D012286 1.4e-18 97.4 152 45.4
BolC2t11856H Brassica oleracea HOM05D010067 ORTHO05D012286 3.6e-17 92.8 153 44.4
BcaC03g17772 Brassica carinata HOM05D010067 ORTHO05D012286 7.9e-17 91.7 153 43.8
C02p57880 Brassica napus HOM05D010067 ORTHO05D012286 1.0e-16 91.3 149 43.0
Aa31LG4G14150 Aethionema arabicum HOM05D010067 ORTHO05D012286 5.3e-13 79.0 134 43.3
Aa31LG3G4370 Aethionema arabicum HOM05D010067 ORTHO05D012286 7.7e-12 75.1 131 41.2
THA.LOC104823173 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 8.5e-11 71.6 140 37.9
A09p17140 Brassica napus HOM05D006070 ORTHO05D009119 4.2e-10 69.3 121 39.7
BraA09t37345Z Brassica rapa HOM05D006070 ORTHO05D009119 4.2e-10 69.3 121 39.7
Cpa.g.sc173.23 Carica papaya HOM05D021832 ORTHO05D118647 7.2e-10 68.6 172 33.1
Cpa.g.sc173.25 Carica papaya HOM05D021832 ORTHO05D120906 7.2e-10 68.6 172 33.1
Cpa.g.sc173.32 Carica papaya HOM05D021832 ORTHO05D009119 1.6e-09 67.4 164 34.8
THA.LOC104820129 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.6e-09 67.4 101 49.5
Cpa.g.sc173.35 Carica papaya HOM05D021832 ORTHO05D118627 2.1e-09 67.0 176 34.1
BcaC04g22285 Brassica carinata HOM05D006070 ORTHO05D009119 3.6e-09 66.2 121 38.8
C09p21210 Brassica napus HOM05D006070 ORTHO05D009119 3.6e-09 66.2 121 38.8
Cpa.g.sc43.109 Carica papaya HOM05D006070 ORTHO05D009119 3.6e-09 66.2 113 38.1
Cpa.g.sc103.82 Carica papaya HOM05D006070 ORTHO05D009119 4.7e-09 65.9 152 35.5
BcaB07g31239 Brassica carinata HOM05D006070 ORTHO05D009119 6.1e-09 65.5 121 38.0
AT1G50780 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 8.0e-09 65.1 107 42.1
C09p72150 Brassica napus HOM05D006070 ORTHO05D020096 8.0e-09 65.1 119 42.0
BolC9t59959H Brassica oleracea HOM05D006070 ORTHO05D020096 8.0e-09 65.1 119 42.0
THA.LOC104810605 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 8.0e-09 65.1 80 51.2
THA.LOC104820177 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.4e-08 64.3 102 47.1
THA.LOC104810603 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.8e-08 63.9 80 50.0
THA.LOC104810604 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.8e-08 63.9 80 50.0
Carub.0002s1331 Capsella rubella HOM05D006070 ORTHO05D009119 2.3e-08 63.5 100 41.0
Sp2g03770 Schrenkiella parvula HOM05D006070 ORTHO05D009119 2.3e-08 63.5 123 42.3
BcaC06g32177 Brassica carinata HOM05D006070 ORTHO05D020096 3.0e-08 63.2 119 41.2
Carub.0007s2769 Capsella rubella HOM05D006070 ORTHO05D009119 3.0e-08 63.2 101 40.6
A10p31460 Brassica napus HOM05D006070 ORTHO05D020096 5.2e-08 62.4 119 41.2
BraA10t45192Z Brassica rapa HOM05D006070 ORTHO05D020096 5.2e-08 62.4 119 41.2
Carub.0002s0435 Capsella rubella HOM05D006070 ORTHO05D009119 5.2e-08 62.4 121 35.5
AL2G15570 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 6.7e-08 62.0 122 40.2
AT1G46408 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 6.7e-08 62.0 120 35.0
Cpa.g.sc1046.4 Carica papaya HOM05D006070 ORTHO05D009119 6.7e-08 62.0 79 48.1
BolC9t55023H Brassica oleracea HOM05D006070 ORTHO05D009119 1.1e-07 61.2 121 38.0
Carub.0004s0822 Capsella rubella HOM05D006070 ORTHO05D009119 2.0e-07 60.5 100 41.0
Thhalv10023871m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 2.0e-07 60.5 124 40.3
Sp5g22450 Schrenkiella parvula HOM05D006070 ORTHO05D020096 2.6e-07 60.1 123 39.8
AL2G15620 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 4.4e-07 59.3 120 38.3
Thhalv10023813m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 9.7e-07 58.2 124 41.1
THA.LOC104819459 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 9.7e-07 58.2 80 47.5
Carub.0002s1330 Capsella rubella HOM05D006070 ORTHO05D009119 1.3e-06 57.8 100 40.0
Thhalv10023175m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.3e-06 57.8 120 35.0
Thhalv10015623m.g Eutrema salsugineum HOM05D006070 ORTHO05D020096 1.7e-06 57.4 105 40.0
PSO210G6024 Papaver somniferum HOM05D000203 ORTHO05D012050 2.2e-06 57.0 128 34.4
THA.LOC104819503 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.2e-06 57.0 134 32.1
THA.LOC104819512 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.2e-06 57.0 134 32.1
Manes.07G111400 Manihot esculenta HOM05D000203 ORTHO05D000135 2.8e-06 56.6 152 33.6
BcaC04g22292 Brassica carinata HOM05D006070 ORTHO05D009119 4.8e-06 55.8 211 30.3
C09p21070 Brassica napus HOM05D006070 ORTHO05D009119 4.8e-06 55.8 211 30.3
BolC9t55008H Brassica oleracea HOM05D006070 ORTHO05D009119 4.8e-06 55.8 211 30.3
PSO832G3896 Papaver somniferum HOM05D000203 ORTHO05D012050 6.3e-06 55.5 128 33.6
Cpa.g.sc173.29 Carica papaya HOM05D021832 ORTHO05D121016 8.2e-06 55.1 172 30.8
Cc09_g08870 Coffea canephora HOM05D000203 ORTHO05D000135 8.2e-06 55.1 91 46.2
Peaxi162Scf00271g00075 Petunia axillaris HOM05D000203 ORTHO05D000135 8.2e-06 55.1 127 37.0
Potri.006G258500 Populus trichocarpa HOM05D000203 ORTHO05D000135 8.2e-06 55.1 76 51.3
Sp2g03710 Schrenkiella parvula HOM05D006070 ORTHO05D009119 8.2e-06 55.1 122 36.1


User provided reference genes

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