Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 2.2e-254 881.7 417 100.0
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 1.2e-204 716.5 413 81.1
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 2.3e-203 712.2 414 80.9
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 6.7e-203 710.7 414 80.7
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 2.2e-201 705.7 413 80.1
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 3.7e-201 704.9 415 80.5
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 3.7e-201 704.9 414 80.2
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 1.8e-200 702.6 412 80.6
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 3.1e-200 701.8 411 80.5
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 5.3e-200 701.0 414 80.4
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 9.0e-200 700.3 413 80.9
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 1.5e-199 699.5 413 79.4
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 5.9e-199 697.6 415 79.8
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 1.2e-196 689.9 407 79.6
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 4.2e-189 664.8 413 77.5
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 9.4e-189 663.7 412 76.7
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 1.1e-184 650.2 406 73.9
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 3.0e-179 632.1 415 74.5
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 1.6e-175 619.8 408 69.1
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 1.6e-175 619.8 405 70.1
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 1.0e-174 617.1 409 68.7
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 2.9e-174 615.5 403 70.0
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 2.5e-173 612.5 403 70.2
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 4.2e-173 611.7 411 69.3
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 5.5e-173 611.3 414 68.6
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 7.2e-173 610.9 404 68.6
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 6.1e-172 607.8 409 67.5
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 3.0e-171 605.5 400 69.5
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 4.0e-171 605.1 401 69.6
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 4.0e-171 605.1 403 69.7
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 6.8e-171 604.4 403 68.2
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 8.8e-171 604.0 401 68.6
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.2e-170 603.6 402 69.7
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 1.2e-170 603.6 400 68.8
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 1.3e-169 600.1 403 69.2
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 1.7e-169 599.7 401 69.3
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 4.8e-169 598.2 403 68.2
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 6.3e-169 597.8 403 67.7
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 1.1e-168 597.0 402 68.7
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 1.1e-168 597.0 401 69.8
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.4e-168 596.7 402 68.7
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 1.8e-168 596.3 401 69.3
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.8e-168 596.3 403 67.2
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 1.8e-168 596.3 403 68.5
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 2.4e-168 595.9 402 67.7
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 3.1e-168 595.5 406 67.7
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 3.1e-168 595.5 396 69.2
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 1.6e-167 593.2 403 67.7
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 2.0e-167 592.8 406 66.0
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 2.7e-167 592.4 403 68.5
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 4.5e-167 591.7 402 68.2
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 5.9e-167 591.3 401 66.6
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 5.9e-167 591.3 403 68.0
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 7.7e-167 590.9 401 67.8
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 7.7e-167 590.9 403 67.5
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 1.0e-166 590.5 398 68.6
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 1.3e-166 590.1 405 67.2
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.3e-166 590.1 401 67.3
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 2.9e-166 589.0 401 68.6
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 3.8e-166 588.6 406 67.5
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 3.8e-166 588.6 406 66.3
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 8.5e-166 587.4 401 67.8
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.1e-165 587.0 401 66.3
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 1.5e-165 586.6 406 68.5
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 2.5e-165 585.9 401 66.8
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 3.2e-165 585.5 398 67.8
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 5.5e-165 584.7 401 67.3
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 5.5e-165 584.7 396 67.9
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 7.2e-165 584.3 403 66.3
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 9.5e-165 583.9 401 67.3
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 1.2e-164 583.6 406 64.8
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 2.1e-164 582.8 400 68.2
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 2.7e-164 582.4 409 66.5
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 3.6e-164 582.0 419 65.2
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 4.7e-164 581.6 400 67.0
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 6.1e-164 581.3 405 65.7
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 1.8e-163 579.7 401 67.8
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 4.0e-163 578.6 403 66.5
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 4.0e-163 578.6 403 66.7
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 1.5e-162 576.6 404 65.6
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 1.5e-162 576.6 403 65.5
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 3.4e-162 575.5 401 65.6
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 3.4e-162 575.5 401 65.8
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 5.7e-162 574.7 403 66.3
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 5.7e-162 574.7 402 66.4
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 3.7e-161 572.0 401 66.6
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 1.1e-160 570.5 402 65.7
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 7.0e-160 567.8 402 66.4
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 1.6e-159 566.6 402 66.2
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 2.7e-159 565.8 401 64.1
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 3.5e-159 565.5 403 63.8
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 1.3e-158 563.5 405 64.2
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 2.3e-158 562.8 402 65.2
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 1.1e-157 560.5 403 64.3
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.1e-156 556.2 376 67.6
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 1.8e-155 553.1 414 63.0
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 2.3e-155 552.7 456 58.3
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 6.8e-155 551.2 405 62.5
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 2.0e-154 549.7 497 55.7
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 8.3e-153 544.3 410 62.0
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 1.4e-152 543.5 386 63.7
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 5.4e-152 541.6 404 61.9
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 9.2e-152 540.8 431 59.2
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 1.2e-148 530.4 401 63.3
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.6e-148 530.0 437 59.7
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 2.8e-148 529.3 406 62.6
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 2.8e-148 529.3 404 60.9
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 6.2e-148 528.1 401 60.1
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.4e-147 526.9 397 61.2
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 5.2e-147 525.0 355 67.6
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 8.9e-147 524.2 400 59.5
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 3.7e-145 518.8 404 61.9
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 8.3e-145 517.7 398 59.5
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 1.6e-143 513.5 315 76.8
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 2.3e-142 509.6 389 61.4
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 7.1e-136 488.0 403 56.8
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 3.6e-132 475.7 338 65.7
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.4e-131 473.8 326 65.6
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 6.8e-131 471.5 446 54.0
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 2.1e-124 449.9 417 54.4
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 1.2e-122 444.1 405 55.1
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 6.7e-102 375.2 389 49.1
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 1.6e-95 354.0 373 49.6
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 1.5e-93 347.4 251 65.3
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.0e-90 337.0 280 56.8
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 7.6e-90 335.1 410 41.7
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 3.6e-87 326.2 409 42.3
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 5.1e-86 322.4 257 58.8
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.3e-85 319.3 250 59.2
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 3.2e-80 303.1 426 41.1
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 5.1e-78 295.8 401 41.1
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 7.4e-77 292.0 201 64.2
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.3e-73 281.2 164 73.2
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 1.3e-68 264.6 168 67.9
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 1.8e-54 217.6 201 54.2
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 4.0e-46 189.9 500 28.8
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 2.8e-44 183.7 100 86.0
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 3.7e-44 183.3 100 86.0
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 7.8e-42 175.6 94 80.9
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 8.9e-30 135.6 164 49.4
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 1.9e-27 127.9 77 76.6
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 1.3e-20 105.1 74 63.5
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 5.4e-19 99.8 122 43.4
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 2.8e-15 87.4 43 86.0
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 1.7e-12 78.2 47 74.5
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 6.4e-12 76.3 47 70.2
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 8.4e-12 75.9 46 71.7
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 1.9e-11 74.7 47 68.1
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 2.7e-10 70.9 40 75.0
BraA01t02993Z Brassica rapa HOM05D004692 ORTHO05D006291 2.5e-08 64.3 32 87.5
BraA09t36800Z Brassica rapa HOM05D004692 ORTHO05D006291 2.5e-08 64.3 32 87.5
RcHm_v2.0_Chr4g0407271 Rosa chinensis HOM05D004692 ORTHO05D342244 9.0e-06 55.8 28 78.6


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