Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 1.2e-173 613.2 353 100.0
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 6.0e-104 381.7 352 69.6
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.1e-97 360.9 356 69.1
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 3.2e-97 359.4 359 70.2
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 7.1e-97 358.2 363 67.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 7.1e-97 358.2 359 69.6
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 1.1e-94 350.9 354 69.5
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 1.9e-94 350.1 354 69.2
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 9.6e-94 347.8 349 64.2
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 8.2e-93 344.7 362 67.1
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 5.3e-92 342.0 358 66.2
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 2.0e-91 340.1 348 67.2
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 2.6e-91 339.7 351 65.8
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 8.5e-74 281.6 315 57.5
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 9.7e-70 268.1 347 50.7
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 1.3e-69 267.7 260 63.8
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 2.6e-67 260.0 350 54.0
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 4.5e-67 259.2 352 55.1
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 7.7e-67 258.5 271 62.4
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.0e-66 258.1 278 59.0
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 2.2e-66 256.9 273 59.7
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 5.5e-65 252.3 270 59.3
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 7.2e-65 251.9 266 57.9
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 7.2e-65 251.9 323 51.7
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 2.7e-64 250.0 352 52.8
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.1e-64 248.8 306 51.3
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.3e-63 246.9 254 55.5
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 2.3e-63 246.9 257 60.7
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.2e-62 244.6 336 52.1
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.5e-62 244.2 263 61.2
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 1.5e-62 244.2 265 55.5
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.7e-62 242.3 327 51.7
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 7.5e-62 241.9 362 47.8
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 9.7e-62 241.5 324 50.6
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 3.7e-61 239.6 327 55.4
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 3.7e-61 239.6 350 49.1
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 3.7e-61 239.6 265 54.3
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 4.1e-60 236.1 258 54.3
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 4.1e-60 236.1 324 50.6
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 4.1e-60 236.1 261 53.3
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 5.3e-60 235.7 255 53.3
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.2e-59 234.6 336 54.8
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.2e-59 234.6 336 54.8
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 1.2e-59 234.6 267 55.4
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 1.6e-59 234.2 260 59.2
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.6e-59 234.2 255 54.1
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.5e-59 232.6 328 51.5
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 5.9e-59 232.3 277 50.9
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 5.9e-59 232.3 310 51.0
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 7.7e-59 231.9 264 52.7
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 7.7e-59 231.9 323 48.6
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.0e-58 231.5 256 58.2
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 2.2e-58 230.3 303 53.1
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 2.2e-58 230.3 269 49.8
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 2.9e-58 229.9 258 53.1
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 3.8e-58 229.6 255 55.7
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 6.5e-58 228.8 261 56.7
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 8.5e-58 228.4 345 48.4
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 5.5e-57 225.7 267 56.2
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 7.2e-57 225.3 274 54.7
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 7.2e-57 225.3 350 50.6
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 1.6e-56 224.2 267 56.2
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 2.1e-56 223.8 258 57.8
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.1e-56 223.8 256 57.0
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 2.7e-56 223.4 266 54.9
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.6e-56 223.0 341 47.2
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 3.6e-56 223.0 370 49.7
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 4.7e-56 222.6 304 47.4
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 8.0e-56 221.9 257 53.3
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 8.0e-56 221.9 337 48.1
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 1.4e-55 221.1 288 53.1
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 2.6e-54 216.9 348 52.3
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 2.6e-54 216.9 271 52.0
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 9.8e-54 214.9 355 47.0
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 1.7e-53 214.2 277 48.7
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.2e-53 213.8 352 48.9
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 2.2e-53 213.8 321 45.8
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 2.8e-53 213.4 271 53.5
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 3.7e-53 213.0 249 54.2
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 6.3e-53 212.2 267 55.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 1.1e-52 211.5 255 52.2
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.1e-52 211.5 328 45.7
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 1.4e-52 211.1 270 47.0
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.6e-51 207.6 271 52.0
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 2.0e-51 207.2 346 45.1
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 5.0e-50 202.6 281 52.7
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.5e-49 200.3 297 48.1
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 7.2e-49 198.7 254 50.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 3.6e-48 196.4 259 49.4
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 3.6e-48 196.4 262 45.8
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 6.1e-48 195.7 272 51.8
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 8.0e-48 195.3 243 54.7
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 2.6e-46 190.3 260 49.6
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 2.2e-45 187.2 227 51.1
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 2.8e-45 186.8 315 50.5
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 4.5e-43 179.5 142 66.9
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 6.6e-42 175.6 251 47.0
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.5e-41 174.5 159 59.1
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 2.3e-39 167.2 310 45.8
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 4.0e-39 166.4 231 52.4
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 2.5e-33 147.1 141 57.4
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 3.2e-28 130.2 171 60.8
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 5.0e-26 122.9 287 36.6
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 6.6e-26 122.5 262 34.4
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 8.6e-26 122.1 254 38.2
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.2e-24 118.2 116 56.0
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.1e-20 105.1 113 55.8
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 6.0e-19 99.4 313 31.3
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 2.2e-13 80.9 229 34.9
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 9.2e-12 75.5 52 65.4
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 3.5e-11 73.6 60 51.7
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 3.9e-10 70.1 39 71.8
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 7.3e-09 65.9 84 53.6
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 8.1e-08 62.4 188 34.0
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 1.8e-07 61.2 130 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 2.0e-06 57.8 135 34.1


User provided reference genes

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