Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G14440 Aethionema arabicum HOM05D006285 ORTHO05D007249 6.8e-88 327.4 178 100.0
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 2.6e-55 219.2 182 69.8
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 1.7e-54 216.5 183 69.9
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 3.2e-53 212.2 182 67.0
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 3.5e-52 208.8 186 67.2
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 3.5e-52 208.8 186 67.2
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 4.6e-52 208.4 182 67.6
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 6.0e-52 208.0 189 66.7
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 1.0e-51 207.2 187 67.4
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 5.1e-51 204.9 181 67.4
BraA02t05154Z Brassica rapa HOM05D006285 ORTHO05D007249 1.9e-50 203.0 187 65.2
A02p01780 Brassica napus HOM05D006285 ORTHO05D007249 3.3e-50 202.2 187 64.7
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 5.6e-50 201.4 186 65.1
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 9.6e-50 200.7 186 65.6
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 3.7e-49 198.7 186 64.5
BcaNung01870 Brassica carinata HOM05D006285 ORTHO05D007249 8.1e-49 197.6 187 64.7
BcaNung01871 Brassica carinata HOM05D006285 ORTHO05D007249 8.1e-49 197.6 187 64.7
BcaNung01167 Brassica carinata HOM05D006285 ORTHO05D007249 2.2e-46 189.5 187 63.1
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 3.8e-46 188.7 180 62.2
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 3.8e-46 188.7 180 62.2
THA.LOC104803190 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 6.4e-46 188.0 193 62.2
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 1.1e-45 187.2 180 62.2
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 1.1e-45 187.2 180 62.2
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 2.3e-43 179.5 194 58.2
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 1.2e-39 167.2 175 60.0
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 1.3e-35 153.7 188 53.2
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 1.3e-35 153.7 188 53.2
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 3.0e-35 152.5 177 52.0
CARHR200230 Cardamine hirsuta HOM05D006285 ORTHO05D007249 3.9e-35 152.1 141 65.2
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 1.1e-34 150.6 187 52.4
Potri.001G062500 Populus trichocarpa HOM05D006285 ORTHO05D007249 2.8e-33 146.0 194 49.5
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 4.8e-33 145.2 188 50.5
Sabra01G0044900 Salix brachista HOM05D006285 ORTHO05D007249 2.4e-32 142.9 194 49.0
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 4.1e-32 142.1 189 49.2
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 1.5e-31 140.2 188 49.5
COL.COLO4_20246 Corchorus olitorius HOM05D006285 ORTHO05D007249 2.6e-31 139.4 188 48.9
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 2.6e-31 139.4 192 48.4
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 7.6e-31 137.9 188 50.0
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 7.6e-31 137.9 188 47.9
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 3.8e-30 135.6 188 46.8
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 3.8e-30 135.6 206 46.1
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 6.5e-30 134.8 181 50.3
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 1.4e-29 133.7 188 49.5
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 7.2e-29 131.3 185 49.7
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 1.6e-28 130.2 171 48.5
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 1.6e-28 130.2 192 47.4
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 2.1e-28 129.8 188 46.8
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 3.6e-28 129.0 187 48.7
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 6.1e-28 128.3 181 49.2
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 7.9e-28 127.9 183 45.9
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 1.0e-27 127.5 209 44.0
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 1.0e-27 127.5 190 46.3
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 2.3e-27 126.3 179 49.7
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 2.3e-27 126.3 179 49.7
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 2.3e-27 126.3 187 46.0
MD16G1127400 Malus domestica HOM05D006285 ORTHO05D007249 5.1e-27 125.2 197 46.2
Actinidia22128 Actinidia chinensis HOM05D006285 ORTHO05D007249 6.7e-27 124.8 175 48.0
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 8.8e-27 124.4 179 48.6
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.5e-26 123.6 200 45.0
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 2.5e-26 122.9 201 41.8
Rhsim12G0098900 Rhododendron simsii HOM05D006285 ORTHO05D007249 2.5e-26 122.9 191 44.5
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 9.7e-26 120.9 177 46.9
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 9.7e-26 120.9 194 45.4
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 2.2e-25 119.8 197 44.2
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 4.8e-25 118.6 175 45.1
Cpa.g.sc207.10 Carica papaya HOM05D006285 ORTHO05D007249 6.3e-25 118.2 173 45.7
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 1.1e-24 117.5 178 46.1
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 1.4e-24 117.1 184 45.1
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 1.4e-24 117.1 182 43.4
BcaB01g05368 Brassica carinata HOM05D006285 ORTHO05D007249 4.1e-24 115.5 172 44.8
Manes.08G102800 Manihot esculenta HOM05D006285 ORTHO05D007249 1.5e-23 113.6 171 45.0
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 2.0e-23 113.2 174 47.7
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 3.8e-22 109.0 173 45.1
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 3.2e-21 105.9 183 42.6
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 5.5e-21 105.1 191 43.5
Gohir.A01G021000 Gossypium hirsutum HOM05D006285 ORTHO05D007249 7.2e-21 104.8 136 49.3
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 1.6e-20 103.6 173 39.9
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 4.7e-20 102.1 189 43.4
EL10Ac6g13588 Beta vulgaris HOM05D006285 ORTHO05D007249 6.1e-20 101.7 184 41.3
Oeu019430.1 Olea europaea HOM05D006285 ORTHO05D007249 3.0e-19 99.4 151 47.0
PSO478G0022 Papaver somniferum HOM05D006285 ORTHO05D007249 2.0e-18 96.7 205 37.1
Lsat_1_v5_gn_3_31461 Lactuca sativa HOM05D006285 ORTHO05D007249 2.6e-18 96.3 177 41.2
Nn4g22189 Nelumbo nucifera HOM05D006285 ORTHO05D007249 5.7e-18 95.1 136 43.4
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 1.3e-17 94.0 179 39.7
PSO017G1512 Papaver somniferum HOM05D006285 ORTHO05D007249 1.3e-17 94.0 204 36.8
ECA233G3183 Erigeron canadensis HOM05D006285 ORTHO05D007249 2.2e-17 93.2 155 43.9
CsaV3_4G002460 Cucumis sativus L. HOM05D006285 ORTHO05D007249 2.8e-17 92.8 191 40.8
TWI36G1029 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 3.7e-17 92.4 160 42.5
Migut.K01038 Erythranthe guttata HOM05D006285 ORTHO05D007249 4.8e-17 92.0 171 41.5
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 6.3e-17 91.7 146 44.5
FAN17G1869 Fragaria x ananassa HOM05D006285 ORTHO05D007249 1.1e-16 90.9 201 37.3
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 3.1e-16 89.4 177 38.4
FAN07G2449 Fragaria x ananassa HOM05D006285 ORTHO05D007249 3.1e-16 89.4 201 36.8
MELO3C017797.2 Cucumis melo HOM05D006285 ORTHO05D007249 2.0e-15 86.7 189 38.1
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 7.7e-15 84.7 192 37.5
HanXRQChr17g0540471 Helianthus annuus HOM05D006285 ORTHO05D007249 7.7e-15 84.7 180 36.7
SalBow2G0692 Salvia bowleyana HOM05D006285 ORTHO05D007249 2.2e-14 83.2 119 43.7
FvH4_4g23000 Fragaria vesca HOM05D006285 ORTHO05D007249 3.8e-14 82.4 195 36.4
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 3.8e-14 82.4 185 37.8
FAN12G2625 Fragaria x ananassa HOM05D006285 ORTHO05D007249 5.0e-14 82.0 196 36.2
Sc04g0010480 Simmondsia chinensis HOM05D006285 ORTHO05D007249 1.1e-13 80.9 147 40.8
Oeu055473.1 Olea europaea HOM05D006285 ORTHO05D007249 1.4e-13 80.5 174 39.1
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 1.4e-13 80.5 189 36.0
Ah.03g135710 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.5e-13 79.7 165 35.8
RcHm_v2.0_Chr4g0429271 Rosa chinensis HOM05D006285 ORTHO05D007249 2.5e-13 79.7 192 34.4
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 3.2e-13 79.3 150 40.0
MBI07_g36277_MAGBIO Magnolia biondii HOM05D006285 ORTHO05D007249 4.2e-13 79.0 172 39.0
Nn3g16318 Nelumbo nucifera HOM05D006285 ORTHO05D007249 1.6e-12 77.0 154 37.7
Sc11g0000190 Simmondsia chinensis HOM05D006285 ORTHO05D007249 2.1e-12 76.6 148 37.8
HanXRQChr08g0210081 Helianthus annuus HOM05D006285 ORTHO05D007249 6.1e-12 75.1 150 38.0
Eucgr.B03545 Eucalyptus grandis HOM05D006285 ORTHO05D007249 2.0e-10 70.1 82 57.3
ECA246G0706 Erigeron canadensis HOM05D006285 ORTHO05D007249 2.6e-10 69.7 217 32.7
AUR62028862 Chenopodium quinoa HOM05D006285 ORTHO05D007249 5.7e-10 68.6 125 39.2
CAN.G1179.3 Capsicum annuum HOM05D006285 ORTHO05D000105 1.7e-09 67.0 82 51.2
SEGI_20867 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 2.2e-09 66.6 181 34.8
CDE02G4729 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 1.1e-08 64.3 121 37.2
AUR62005696 Chenopodium quinoa HOM05D006285 ORTHO05D007249 7.0e-08 61.6 168 32.1
ClCG07G011740 Citrullus lanatus HOM05D006285 ORTHO05D007249 9.1e-08 61.2 86 46.5
Aqoxy3G01789 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 1.6e-07 60.5 88 48.9
Zm00001eb084980 Zea mays HOM05D006285 ORTHO05D007249 4.5e-07 58.9 83 44.6
Oeu003277.1 Olea europaea HOM05D006285 ORTHO05D007249 2.2e-06 56.6 173 32.9
HPP92_023090 Vanilla planifolia HOM05D006285 ORTHO05D007249 6.5e-06 55.1 180 29.4


User provided reference genes

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