Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 3.5e-62 242.3 160 100.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.9e-44 183.3 168 81.5
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.8e-42 176.8 162 75.3
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.5e-41 173.7 162 76.5
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 3.4e-41 172.6 162 76.5
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.1e-39 167.5 103 85.4
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.1e-39 167.5 113 78.8
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 2.8e-35 152.9 107 79.4
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 6.3e-35 151.8 106 76.4
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 6.3e-35 151.8 106 76.4
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 6.3e-35 151.8 106 76.4
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.4e-34 150.6 101 77.2
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 3.1e-34 149.4 163 72.4
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 2.9e-32 142.9 160 68.8
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 2.5e-31 139.8 103 77.7
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 9.4e-31 137.9 110 70.0
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.1e-30 136.7 106 69.8
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 4.6e-30 135.6 110 68.2
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 6.1e-30 135.2 120 62.5
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 1.8e-29 133.7 160 68.1
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 6.7e-29 131.7 102 72.5
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 8.8e-29 131.3 109 67.0
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 8.8e-29 131.3 108 67.6
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.1e-28 131.0 98 71.4
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 2.0e-28 130.2 112 66.1
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 3.3e-28 129.4 112 67.0
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 4.4e-28 129.0 102 68.6
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 5.7e-28 128.6 107 65.4
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 5.7e-28 128.6 99 68.7
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 7.4e-28 128.3 109 61.5
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 7.4e-28 128.3 111 69.4
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 7.4e-28 128.3 109 66.1
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.3e-27 127.5 108 65.7
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 1.7e-27 127.1 101 70.3
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 2.2e-27 126.7 110 67.3
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 4.8e-27 125.6 107 62.6
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.1e-26 124.4 107 63.6
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.1e-26 124.4 106 64.2
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 2.4e-26 123.2 107 63.6
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 2.4e-26 123.2 106 65.1
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 4.1e-26 122.5 108 61.1
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 5.3e-26 122.1 107 63.6
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 6.9e-26 121.7 112 61.6
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 9.1e-26 121.3 62 95.2
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 9.1e-26 121.3 62 95.2
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 9.1e-26 121.3 101 66.3
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.5e-25 120.6 104 63.5
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.5e-25 120.6 112 62.5
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 1.5e-25 120.6 108 62.0
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 3.4e-25 119.4 101 65.3
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.5e-25 119.0 107 60.7
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 4.5e-25 119.0 108 63.0
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 7.7e-25 118.2 107 63.6
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 2.2e-24 116.7 102 63.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 2.9e-24 116.3 102 62.7
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 3.8e-24 115.9 66 87.9
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 3.8e-24 115.9 100 65.0
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 5.0e-24 115.5 108 62.0
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 5.0e-24 115.5 111 61.3
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 5.0e-24 115.5 67 85.1
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 8.5e-24 114.8 112 58.0
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.1e-23 114.4 70 82.9
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.4e-23 114.0 97 66.0
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.9e-23 113.6 101 62.4
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 1.9e-23 113.6 113 59.3
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 7.2e-23 111.7 63 84.1
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 2.1e-22 110.2 99 63.6
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 2.7e-22 109.8 118 57.6
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 3.6e-22 109.4 79 72.2
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 4.7e-22 109.0 102 62.7
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 4.7e-22 109.0 89 65.2
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 4.7e-22 109.0 97 59.8
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 4.7e-22 109.0 113 56.6
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.4e-21 107.5 69 76.8
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.8e-21 107.1 63 79.4
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 2.3e-21 106.7 91 65.9
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.3e-21 106.7 104 58.7
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 2.3e-21 106.7 113 54.0
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 3.0e-21 106.3 53 94.3
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 3.0e-21 106.3 102 60.8
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 5.2e-21 105.5 63 79.4
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 8.8e-21 104.8 65 78.5
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.1e-20 104.4 63 79.4
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.5e-20 104.0 101 59.4
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 2.6e-20 103.2 70 71.4
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.7e-20 102.1 93 61.3
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 7.4e-20 101.7 55 85.5
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 3.7e-19 99.4 101 58.4
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 7.0e-18 95.1 93 57.0
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 7.7e-17 91.7 103 50.5
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.3e-16 90.9 66 66.7
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 5.0e-16 89.0 105 49.5
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 1.5e-15 87.4 110 49.1
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 9.4e-15 84.7 60 68.3
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 7.0e-10 68.6 93 45.2


User provided reference genes

Program Settings